Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p39710 Brassica napus HOM05D039519 ORTHO05D032788 5.1e-84 314.3 152 100.0
BolC7t44496H Brassica oleracea HOM05D039519 ORTHO05D032788 5.8e-80 300.8 152 97.4
BcaNung02583 Brassica carinata HOM05D039519 ORTHO05D032788 2.0e-19 99.8 58 81.0
A02p37900 Brassica napus HOM05D005069 ORTHO05D006024 1.5e-11 73.6 36 88.9
BraA02t08774Z Brassica rapa HOM05D005069 ORTHO05D006024 1.5e-11 73.6 36 88.9
BcaC03g17701 Brassica carinata HOM05D005069 ORTHO05D006024 9.8e-11 70.9 36 83.3
C02p57050 Brassica napus HOM05D007614 ORTHO05D009538 9.8e-11 70.9 36 83.3
BolC2t11776H Brassica oleracea HOM05D005069 ORTHO05D006024 9.8e-11 70.9 36 83.3
Sp2g19500 Schrenkiella parvula HOM05D005069 ORTHO05D006024 2.9e-10 69.3 55 69.1
AT5G49150 Arabidopsis thaliana HOM05D005069 ORTHO05D006024 3.7e-10 68.9 34 82.4
Thhalv10005444m.g Eutrema salsugineum HOM05D005069 ORTHO05D006024 4.9e-10 68.6 36 77.8
AL8G22670 Arabidopsis lyrata HOM05D005069 ORTHO05D006024 8.3e-10 67.8 34 79.4
CARHR186440 Cardamine hirsuta HOM05D005069 ORTHO05D006024 2.4e-09 66.2 55 63.6
Aa31LG11G8390 Aethionema arabicum HOM05D005069 ORTHO05D006024 5.4e-09 65.1 36 75.0
Carub.0008s0895 Capsella rubella HOM05D005069 ORTHO05D006024 5.9e-08 61.6 50 62.0
THA.LOC104818914 Tarenaya hassleriana HOM05D005069 ORTHO05D006024 7.8e-08 61.2 34 70.6
Duzib151G0715 Durio zibethinus HOM05D005069 ORTHO05D006024 1.0e-07 60.8 56 51.8
Gohir.D02G055533 Gossypium hirsutum HOM05D005069 ORTHO05D006024 1.7e-07 60.1 37 67.6
Gorai.005G061500 Gossypium raimondii HOM05D005069 ORTHO05D006024 1.7e-07 60.1 37 67.6
Gohir.A02G050600 Gossypium hirsutum HOM05D005069 ORTHO05D006024 3.0e-07 59.3 37 67.6
Rhsim04G0224900 Rhododendron simsii HOM05D005069 ORTHO05D006024 3.0e-07 59.3 39 64.1
Atru.chr4.2893 Acer truncatum HOM05D005069 ORTHO05D006024 5.0e-07 58.5 55 52.7
GSVIVG01035118001 Vitis vinifera HOM05D005069 ORTHO05D006024 8.6e-07 57.8 37 62.2
Haze_01171 Corylus avellana HOM05D005069 ORTHO05D006024 1.5e-06 57.0 37 64.9
Manes.04G046000 Manihot esculenta HOM05D005069 ORTHO05D006024 1.5e-06 57.0 34 67.6
Manes.04G046718 Manihot esculenta HOM05D005069 ORTHO05D006024 1.5e-06 57.0 34 67.6
CSS0043552 Camellia sinensis var. sinensis HOM05D005069 ORTHO05D006024 3.3e-06 55.8 38 63.2
Cpa.g.sc50.170 Carica papaya HOM05D005069 ORTHO05D006024 3.3e-06 55.8 38 63.2
TAR636G0683 Trochodendron aralioides HOM05D005069 ORTHO05D006024 3.3e-06 55.8 37 64.9
Hma1.2p1_0078F.1_g040620 Hydrangea macrophylla HOM05D005069 ORTHO05D006024 4.3e-06 55.5 37 62.2
arahy.Tifrunner.gnm1.ann1.I5RJVP Arachis hypogaea HOM05D005069 ORTHO05D006024 7.3e-06 54.7 37 59.5
TWI09G0094 Tripterygium wilfordii HOM05D005069 ORTHO05D006024 7.3e-06 54.7 34 67.6
Lj6C680G7 Lonicera japonica HOM05D005069 ORTHO05D006024 9.5e-06 54.3 34 64.7
Prupe.1G132400 Prunus persica HOM05D005069 ORTHO05D006024 9.5e-06 54.3 55 45.5


User provided reference genes

Program Settings