Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p39220 Brassica napus HOM05D007255 ORTHO05D009052 2.4e-133 478.8 235 100.0
BolC7t44442H Brassica oleracea HOM05D007255 ORTHO05D009052 9.2e-133 476.9 235 99.6
A06p39120 Brassica napus HOM05D007255 ORTHO05D009052 2.8e-129 465.3 235 97.0
BraA06t26826Z Brassica rapa HOM05D007255 ORTHO05D009052 2.3e-128 462.2 235 96.6
Sp2g18890 Schrenkiella parvula HOM05D007255 ORTHO05D009052 5.2e-120 434.5 236 92.8
BcaC06g30785 Brassica carinata HOM05D007255 ORTHO05D009052 1.6e-116 422.9 224 93.3
Thhalv10004862m.g Eutrema salsugineum HOM05D007255 ORTHO05D009052 1.1e-114 416.8 235 90.2
Aa31LG5G18020 Aethionema arabicum HOM05D007255 ORTHO05D009052 5.6e-106 387.9 238 83.2
AL3G18750 Arabidopsis lyrata HOM05D007255 ORTHO05D009052 8.1e-105 384.0 236 84.3
CARHR082090 Cardamine hirsuta HOM05D007255 ORTHO05D009052 2.0e-103 379.4 236 82.2
Carub.0003s0699 Capsella rubella HOM05D007255 ORTHO05D009052 1.1e-101 373.6 236 82.2
AT3G07440 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 3.2e-101 372.1 236 80.9
THA.LOC104818995 Tarenaya hassleriana HOM05D007255 ORTHO05D009052 3.1e-96 355.5 238 76.9
AT5G48530 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 8.7e-91 337.4 197 88.3
Cpa.g.sc8.78 Carica papaya HOM05D007255 ORTHO05D009052 3.2e-85 318.9 235 69.8
RcHm_v2.0_Chr6g0282891 Rosa chinensis HOM05D007255 ORTHO05D009052 6.0e-84 314.7 234 68.4
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 1.8e-83 313.2 234 67.9
FAN15G3515 Fragaria x ananassa HOM05D007255 ORTHO05D009052 3.9e-83 312.0 231 68.4
FAN27G1291 Fragaria x ananassa HOM05D007255 ORTHO05D009052 3.9e-83 312.0 231 68.4
Prupe.8G191100 Prunus persica HOM05D007255 ORTHO05D009052 3.9e-83 312.0 237 67.9
Sabra02G0190600 Salix brachista HOM05D007255 ORTHO05D009052 5.1e-83 311.6 234 68.8
FvH4_2g17870 Fragaria vesca HOM05D007255 ORTHO05D009052 1.5e-82 310.1 231 68.4
PGR044G0433 Punica granatum HOM05D007255 ORTHO05D009052 1.9e-82 309.7 218 73.9
TPR.G15196 Trifolium pratense HOM05D007255 ORTHO05D009052 3.3e-82 308.9 235 69.8
FAN24G0557 Fragaria x ananassa HOM05D007255 ORTHO05D009052 5.6e-82 308.1 231 68.0
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 9.6e-82 307.4 237 69.6
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 9.6e-82 307.4 237 69.6
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 2.1e-81 306.2 233 67.8
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 4.8e-81 305.1 238 66.8
Eucgr.K02090 Eucalyptus grandis HOM05D007255 ORTHO05D009052 6.2e-81 304.7 234 68.4
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 8.1e-81 304.3 234 67.1
Potri.002G250500 Populus trichocarpa HOM05D007255 ORTHO05D009052 8.1e-81 304.3 234 67.5
Manes.13G054000 Manihot esculenta HOM05D007255 ORTHO05D009052 1.8e-80 303.1 234 66.7
QL09p046138 Quercus lobata HOM05D007255 ORTHO05D009052 3.1e-80 302.4 234 64.5
MD10G1152600 Malus domestica HOM05D007255 ORTHO05D009052 4.0e-80 302.0 221 71.0
Atru.chr6.3551 Acer truncatum HOM05D007255 ORTHO05D009052 6.9e-80 301.2 232 67.2
Gorai.007G159200 Gossypium raimondii HOM05D007255 ORTHO05D009052 6.9e-80 301.2 236 66.5
TWI18G1029 Tripterygium wilfordii HOM05D007255 ORTHO05D009052 1.5e-79 300.1 237 67.9
Gohir.A11G142200 Gossypium hirsutum HOM05D007255 ORTHO05D009052 5.8e-79 298.1 236 66.5
Gohir.D11G148500 Gossypium hirsutum HOM05D007255 ORTHO05D009052 5.8e-79 298.1 236 66.1
Lj3g0001968 Lotus japonicus HOM05D007255 ORTHO05D009052 2.9e-78 295.8 244 65.2
Ciclev10016497m.g Citrus clementina HOM05D007255 ORTHO05D009052 6.5e-78 294.7 232 67.7
Hma1.2p1_0161F.1_g071360 Hydrangea macrophylla HOM05D007255 ORTHO05D009052 1.4e-77 293.5 235 65.5
Medtr8g011480 Medicago truncatula HOM05D007255 ORTHO05D009052 1.4e-77 293.5 235 68.1
arahy.Tifrunner.gnm1.ann1.TV22BE Arachis hypogaea HOM05D007255 ORTHO05D009052 3.2e-77 292.4 245 64.9
CANSAT01G0773 Cannabis sativa HOM05D007255 ORTHO05D009052 2.7e-76 289.3 234 64.5
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 1.0e-75 287.3 234 63.2
SalBow6G0858 Salvia bowleyana HOM05D007255 ORTHO05D009052 3.0e-75 285.8 240 63.3
Nitab4.5_0000038g0080 Nicotiana tabacum HOM05D007255 ORTHO05D009052 6.7e-75 284.6 238 62.6
Nitab4.5_0005972g0030 Nicotiana tabacum HOM05D007255 ORTHO05D009052 3.3e-74 282.3 238 61.8
Solyc09g058990.3 Solanum lycopersicum HOM05D007255 ORTHO05D009052 3.3e-74 282.3 238 62.6
SGA_v2.0_scaffold29G12102 Striga asiatica HOM05D007255 ORTHO05D009052 3.3e-74 282.3 223 64.1
TAR365G1235 Trochodendron aralioides HOM05D007255 ORTHO05D009052 7.4e-74 281.2 239 64.0
Glyma.03G089600 Glycine max HOM05D007255 ORTHO05D009052 2.8e-73 279.3 237 65.4
Sopen09g020080 Solanum pennellii HOM05D007255 ORTHO05D009052 3.7e-73 278.9 240 62.5
Rhsim01G0248900 Rhododendron simsii HOM05D007255 ORTHO05D009052 4.8e-73 278.5 241 61.8
MSTRG.18490 Avicennia marina HOM05D007255 ORTHO05D009052 6.3e-73 278.1 240 63.8
Oeu064665.2 Olea europaea HOM05D007255 ORTHO05D009052 6.3e-73 278.1 251 59.4
arahy.Tifrunner.gnm1.ann1.UDT0KZ Arachis hypogaea HOM05D007255 ORTHO05D009052 4.1e-72 275.4 218 67.0
Cc01_g16200 Coffea canephora HOM05D007255 ORTHO05D009052 6.9e-72 274.6 239 63.6
Hund02793 Selenicereus undatus HOM05D007255 ORTHO05D009052 6.9e-72 274.6 238 64.3
Sc05g0001760 Simmondsia chinensis HOM05D007255 ORTHO05D009052 9.0e-72 274.2 235 61.3
Aqoxy5G00040 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 1.2e-71 273.9 234 60.3
Lalb_Chr12g0210041 Lupinus albus HOM05D007255 ORTHO05D009052 1.5e-71 273.5 233 62.7
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 4.5e-71 271.9 264 57.6
Actinidia34549 Actinidia chinensis HOM05D007255 ORTHO05D009052 7.6e-71 271.2 236 61.0
MELO3C012737.2 Cucumis melo HOM05D007255 ORTHO05D009052 1.0e-70 270.8 229 63.3
Migut.D00726 Erythranthe guttata HOM05D007255 ORTHO05D009052 1.0e-70 270.8 239 60.3
Phvul.010G031200 Phaseolus vulgaris HOM05D007255 ORTHO05D009052 1.7e-70 270.0 236 64.0
Sed0001908 Sechium edule HOM05D007255 ORTHO05D009052 1.7e-70 270.0 231 63.2
Ah.11g051090 Amaranthus hybridus HOM05D007255 ORTHO05D009052 6.5e-70 268.1 212 65.1
CsaV3_7G026920 Cucumis sativus L. HOM05D007255 ORTHO05D009052 1.4e-69 266.9 231 63.6
vmacro14695 Vaccinium macrocarpon HOM05D007255 ORTHO05D009052 5.5e-69 265.0 247 58.3
ECA248G0740 Erigeron canadensis HOM05D007255 ORTHO05D009052 2.1e-68 263.1 235 60.4
AUR62028710 Chenopodium quinoa HOM05D007255 ORTHO05D009052 5.1e-67 258.5 257 57.6
EL10Ac5g10635 Beta vulgaris HOM05D007255 ORTHO05D009052 3.3e-66 255.8 232 58.6
PSO170G5614 Papaver somniferum HOM05D007255 ORTHO05D009052 4.3e-66 255.4 204 64.7
Nn1g08274 Nelumbo nucifera HOM05D007255 ORTHO05D009052 2.2e-65 253.1 302 48.3
PSO357G0536 Papaver somniferum HOM05D007255 ORTHO05D009052 4.8e-65 251.9 203 64.0
Lsat_1_v5_gn_5_178401 Lactuca sativa HOM05D007255 ORTHO05D009052 8.2e-65 251.1 241 57.7
Os02g0478500 Oryza sativa ssp. japonica HOM05D007255 ORTHO05D009052 8.2e-65 251.1 162 75.9
Haze_03304 Corylus avellana HOM05D007255 ORTHO05D009052 1.5e-63 246.9 183 70.5
unitig_62.g23864 Utricularia gibba HOM05D007255 ORTHO05D009052 4.5e-63 245.4 213 60.1
Zm00001eb241080 Zea mays HOM05D007255 ORTHO05D009052 5.9e-63 245.0 178 70.2
unitig_64.g29772 Utricularia gibba HOM05D007255 ORTHO05D009052 1.1e-61 240.7 225 56.9
Nn1g03664 Nelumbo nucifera HOM05D007255 ORTHO05D009052 7.2e-61 238.0 232 55.2
GSVIVG01006076001 Vitis vinifera HOM05D007255 ORTHO05D009052 3.6e-60 235.7 159 71.7
ATR0491G001 Amborella trichopoda HOM05D007255 ORTHO05D009052 5.1e-59 231.9 159 72.3
HanXRQChr01g0025051 Helianthus annuus HOM05D007255 ORTHO05D009052 3.7e-57 225.7 195 64.1
CSS0043687 Camellia sinensis var. sinensis HOM05D007255 ORTHO05D009052 1.4e-56 223.8 159 71.7
Aqoxy2G00044 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 5.9e-55 218.4 178 62.9
Lj1A100G17 Lonicera japonica HOM05D007255 ORTHO05D009052 3.8e-54 215.7 181 63.0
DCAR_018628 Daucus carota HOM05D007255 ORTHO05D009052 2.5e-53 213.0 169 64.5
Peaxi162Scf00335g01514 Petunia axillaris HOM05D007255 ORTHO05D009052 1.1e-50 204.1 239 51.0
Actinidia23788 Actinidia chinensis HOM05D007255 ORTHO05D009052 1.8e-43 180.3 208 51.0
HPP92_024260 Vanilla planifolia HOM05D007255 ORTHO05D009052 5.0e-38 162.2 131 61.8
Glyma.16G083400 Glycine max HOM05D007255 ORTHO05D009052 6.5e-38 161.8 116 70.7
AUR62008128 Chenopodium quinoa HOM05D007255 ORTHO05D009052 6.8e-35 151.8 131 62.6
VMungo0331G1225 Vigna mungo HOM05D007255 ORTHO05D009052 1.8e-27 127.1 126 58.7
HPP92_024228 Vanilla planifolia HOM05D007255 ORTHO05D009052 5.7e-26 122.1 93 65.6
VMungo0331G0526 Vigna mungo HOM05D007255 ORTHO05D009052 4.1e-24 115.9 102 64.7
Prupe.8G191300 Prunus persica HOM05D007255 ORTHO05D009052 5.6e-21 105.5 91 59.3
CDE04G1852 Ceratophyllum demersum HOM05D007255 ORTHO05D009052 6.1e-20 102.1 80 62.5
SEGI_09952 Sequoiadendron giganteum HOM05D007255 ORTHO05D009052 6.8e-19 98.6 74 68.9
VMungo0251G0654 Vigna mungo HOM05D007255 ORTHO05D009052 3.7e-17 92.8 60 76.7
Psat0s4060g0280 Pisum sativum HOM05D007255 ORTHO05D009052 6.4e-09 65.5 68 57.4
GSVIVG01006250001 Vitis vinifera HOM05D007255 ORTHO05D009052 1.9e-08 63.9 77 51.9


User provided reference genes

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