Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p39050 Brassica napus HOM05D000913 ORTHO05D000687 3.9e-64 248.8 225 100.0
BolC7t44424H Brassica oleracea HOM05D000913 ORTHO05D000687 2.3e-40 169.9 193 86.0
BraA06t26842Z Brassica rapa HOM05D000913 ORTHO05D000687 3.7e-30 136.0 224 48.2
A06p39280 Brassica napus HOM05D000913 ORTHO05D000687 3.1e-29 132.9 224 49.6
CARHR184000 Cardamine hirsuta HOM05D000913 ORTHO05D000687 3.6e-25 119.4 208 49.5
CARHR082300 Cardamine hirsuta HOM05D000913 ORTHO05D000687 4.3e-23 112.5 193 43.5
A03p35370 Brassica napus HOM05D000913 ORTHO05D000687 2.8e-22 109.8 199 38.7
BraA03t12715Z Brassica rapa HOM05D000913 ORTHO05D000687 2.8e-22 109.8 199 38.7
BolC3t16566H Brassica oleracea HOM05D000913 ORTHO05D000687 1.8e-21 107.1 199 38.2
Carub.0008s0784 Capsella rubella HOM05D000913 ORTHO05D000687 5.3e-21 105.5 203 53.7
Thhalv10021695m.g Eutrema salsugineum HOM05D000913 ORTHO05D000687 6.9e-21 105.1 215 42.3
BcaB03g14690 Brassica carinata HOM05D000913 ORTHO05D000687 9.1e-21 104.8 199 37.7
BcaC01g04273 Brassica carinata HOM05D000913 ORTHO05D000687 9.1e-21 104.8 199 37.7
C03p42980 Brassica napus HOM05D000913 ORTHO05D000687 9.1e-21 104.8 199 37.7
AT3G07600 Arabidopsis thaliana HOM05D000913 ORTHO05D000687 1.9e-18 97.1 194 46.4
Aa31LG5G18190 Aethionema arabicum HOM05D000913 ORTHO05D000687 7.2e-18 95.1 203 52.2
BolC1t05541H Brassica oleracea HOM05D000191 ORTHO05D000122 9.4e-18 94.7 213 44.6
Sp3g06540 Schrenkiella parvula HOM05D000913 ORTHO05D000687 1.6e-17 94.0 199 41.2
THA.LOC104822446 Tarenaya hassleriana HOM05D000913 ORTHO05D000687 2.7e-17 93.2 195 44.1
BraA05t22790Z Brassica rapa HOM05D000913 ORTHO05D000687 1.8e-16 90.5 66 72.7
BraA01t04371Z Brassica rapa HOM05D000191 ORTHO05D000122 6.7e-16 88.6 213 45.5
AT5G48290 Arabidopsis thaliana HOM05D000913 ORTHO05D000687 1.1e-15 87.8 197 56.9
BcaB04g21280 Brassica carinata HOM05D000913 ORTHO05D000687 3.3e-15 86.3 213 41.8
AL8G21010 Arabidopsis lyrata HOM05D000913 ORTHO05D000687 4.4e-15 85.9 52 86.5
A05p40590 Brassica napus HOM05D000913 ORTHO05D000687 4.4e-15 85.9 208 38.9
AL3G18960 Arabidopsis lyrata HOM05D000913 ORTHO05D000687 5.7e-15 85.5 59 79.7
AL8G14310 Arabidopsis lyrata HOM05D000913 ORTHO05D000687 7.4e-15 85.1 56 80.4
Carub.0003s0717 Capsella rubella HOM05D000913 ORTHO05D000687 2.2e-14 83.6 70 68.6
Sp2g18640 Schrenkiella parvula HOM05D000913 ORTHO05D000687 1.8e-13 80.5 194 52.1
BcaC06g30813 Brassica carinata HOM05D000913 ORTHO05D000687 2.0e-12 77.0 35 91.4
Carub.0008s0291 Capsella rubella HOM05D000005 ORTHO05D012152 1.4e-08 64.3 50 66.0
Aqoxy4G01749 Aquilegia oxysepala HOM05D000913 ORTHO05D000687 6.7e-08 62.0 58 58.6
Aqoxy4G01739 Aquilegia oxysepala HOM05D000913 ORTHO05D000687 8.8e-08 61.6 63 52.4
Nn5g28781 Nelumbo nucifera HOM05D000913 ORTHO05D000687 1.5e-07 60.8 80 41.2
Dinv05336 Davidia involucrata HOM05D000913 ORTHO05D000687 3.3e-07 59.7 53 58.5
QL04p074221 Quercus lobata HOM05D000913 ORTHO05D000687 5.7e-07 58.9 60 48.3
Nn5g28779 Nelumbo nucifera HOM05D000913 ORTHO05D000687 9.7e-07 58.2 80 40.0
Thecc.01G201000 Theobroma cacao HOM05D000913 ORTHO05D000687 9.7e-07 58.2 64 53.1
RcHm_v2.0_Chr5g0042671 Rosa chinensis HOM05D000913 ORTHO05D000687 1.7e-06 57.4 81 40.7
Gohir.D07G169300 Gossypium hirsutum HOM05D000913 ORTHO05D000687 2.2e-06 57.0 59 57.6
Gorai.001G189300 Gossypium raimondii HOM05D000913 ORTHO05D000687 2.2e-06 57.0 59 57.6
QL05p004858 Quercus lobata HOM05D000913 ORTHO05D000687 2.2e-06 57.0 62 48.4
QL05p005810 Quercus lobata HOM05D000913 ORTHO05D000687 2.2e-06 57.0 77 41.6
Haze_09793 Corylus avellana HOM05D000913 ORTHO05D000687 2.8e-06 56.6 51 54.9
Aqoxy4G01747 Aquilegia oxysepala HOM05D000913 ORTHO05D000687 4.8e-06 55.8 75 38.7
Gohir.A07G162700 Gossypium hirsutum HOM05D000913 ORTHO05D000687 4.8e-06 55.8 59 54.2
MBI14_g15410_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 4.8e-06 55.8 89 38.2
MD03G1038900 Malus domestica HOM05D000913 ORTHO05D000687 6.3e-06 55.5 81 38.3
QL05p004788 Quercus lobata HOM05D000913 ORTHO05D000687 6.3e-06 55.5 75 41.3
Gohir.D11G154200 Gossypium hirsutum HOM05D000913 ORTHO05D000687 8.2e-06 55.1 63 50.8
Gorai.007G164300 Gossypium raimondii HOM05D000913 ORTHO05D000687 8.2e-06 55.1 63 50.8
MBI14_g17948_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 8.2e-06 55.1 60 46.7


User provided reference genes

Program Settings