Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p38860 Brassica napus HOM05D005285 ORTHO05D006829 4.4e-211 737.6 360 100.0
BolC7t44405H Brassica oleracea HOM05D005285 ORTHO05D006829 8.3e-210 733.4 360 99.4
BcaC06g30830 Brassica carinata HOM05D005285 ORTHO05D006829 7.8e-208 726.9 360 98.3
A06p39410 Brassica napus HOM05D005285 ORTHO05D006829 3.9e-207 724.5 360 98.3
BraA06t26856Z Brassica rapa HOM05D005285 ORTHO05D006829 3.9e-207 724.5 360 98.3
Sp2g18470 Schrenkiella parvula HOM05D005285 ORTHO05D006829 1.4e-196 689.5 360 93.6
Thhalv10004473m.g Eutrema salsugineum HOM05D005285 ORTHO05D006829 4.0e-196 688.0 360 93.3
AL8G20280 Arabidopsis lyrata HOM05D005285 ORTHO05D006829 6.8e-196 687.2 360 93.3
Carub.0008s0757 Capsella rubella HOM05D005285 ORTHO05D006829 4.6e-192 674.5 360 91.9
CARHR184290 Cardamine hirsuta HOM05D005285 ORTHO05D006829 8.7e-191 670.2 360 90.6
AT5G48020 Arabidopsis thaliana HOM05D005285 ORTHO05D006829 7.3e-190 667.2 360 90.3
Aa31LG11G7560 Aethionema arabicum HOM05D005285 ORTHO05D006829 1.2e-187 659.8 363 89.3
THA.LOC104819060 Tarenaya hassleriana HOM05D005285 ORTHO05D006829 3.1e-180 635.2 363 85.4
PGR044G0372 Punica granatum HOM05D005285 ORTHO05D006829 2.2e-170 602.4 366 79.2
Gohir.A08G026900 Gossypium hirsutum HOM05D005285 ORTHO05D006829 1.6e-168 596.3 364 81.0
Thecc.01G414500 Theobroma cacao HOM05D005285 ORTHO05D006829 1.6e-168 596.3 361 80.3
Cpa.g.sc234.2 Carica papaya HOM05D005285 ORTHO05D006829 1.3e-167 593.2 365 79.7
Duzib268G1126 Durio zibethinus HOM05D005285 ORTHO05D006829 2.3e-167 592.4 362 79.6
Gorai.004G035700 Gossypium raimondii HOM05D005285 ORTHO05D006829 2.3e-167 592.4 364 79.9
Manes.10G147800 Manihot esculenta HOM05D005285 ORTHO05D006829 1.1e-166 590.1 369 77.8
TWI09G0675 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 1.5e-166 589.7 364 78.6
Gohir.D08G037700 Gossypium hirsutum HOM05D005285 ORTHO05D006829 3.3e-166 588.6 365 80.0
Ciclev10031943m.g Citrus clementina HOM05D005285 ORTHO05D006829 1.3e-165 586.6 360 78.6
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 1.6e-165 586.3 350 80.3
Potri.001G271100 Populus trichocarpa HOM05D005285 ORTHO05D006829 1.6e-165 586.3 369 77.5
Lalb_Chr03g0033921 Lupinus albus HOM05D005285 ORTHO05D006829 6.2e-165 584.3 356 79.2
Cfa010729 Carpinus fangiana HOM05D005285 ORTHO05D006829 8.2e-165 583.9 364 78.6
MELO3C023957.2 Cucumis melo HOM05D005285 ORTHO05D006829 8.2e-165 583.9 362 77.9
ClCG10G012540 Citrullus lanatus HOM05D005285 ORTHO05D006829 1.1e-164 583.6 362 77.3
Haze_03242 Corylus avellana HOM05D005285 ORTHO05D006829 1.4e-164 583.2 364 78.0
MBI04_g14265_MAGBIO Magnolia biondii HOM05D005285 ORTHO05D006829 1.4e-164 583.2 359 77.7
TWI53G0546 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 1.8e-164 582.8 363 77.7
Actinidia20684 Actinidia chinensis HOM05D005285 ORTHO05D006829 2.4e-164 582.4 360 78.3
DCAR_029637 Daucus carota HOM05D005285 ORTHO05D006829 2.4e-164 582.4 359 79.7
Eucgr.J01257 Eucalyptus grandis HOM05D005285 ORTHO05D006829 4.0e-164 581.6 367 77.7
CsaV3_3G032330 Cucumis sativus L. HOM05D005285 ORTHO05D006829 6.9e-164 580.9 362 76.8
CSS0013341 Camellia sinensis var. sinensis HOM05D005285 ORTHO05D006829 1.2e-163 580.1 362 77.9
Dinv09380 Davidia involucrata HOM05D005285 ORTHO05D006829 1.5e-163 579.7 362 78.2
QL04p004838 Quercus lobata HOM05D005285 ORTHO05D006829 2.6e-163 578.9 357 78.2
TAR636G1692 Trochodendron aralioides HOM05D005285 ORTHO05D006829 2.6e-163 578.9 362 77.6
CANSAT21G0587 Cannabis sativa HOM05D005285 ORTHO05D006829 3.4e-163 578.6 360 79.4
FAN03G1002 Fragaria x ananassa HOM05D005285 ORTHO05D006829 3.4e-163 578.6 357 79.0
Peaxi162Scf00042g00510 Petunia axillaris HOM05D005285 ORTHO05D006829 3.4e-163 578.6 358 78.2
Sed0014745 Sechium edule HOM05D005285 ORTHO05D006829 3.4e-163 578.6 359 77.7
FvH4_7g00610 Fragaria vesca HOM05D005285 ORTHO05D006829 1.0e-162 577.0 356 79.5
FAN10G3755 Fragaria x ananassa HOM05D005285 ORTHO05D006829 1.3e-162 576.6 356 79.5
RcHm_v2.0_Chr1g0314801 Rosa chinensis HOM05D005285 ORTHO05D006829 1.3e-162 576.6 356 78.4
Lj9A629T99 Lonicera japonica HOM05D005285 ORTHO05D006829 1.7e-162 576.2 354 79.1
FAN06G0391 Fragaria x ananassa HOM05D005285 ORTHO05D006829 2.2e-162 575.9 356 79.5
MD02G1316300 Malus domestica HOM05D005285 ORTHO05D006829 2.2e-162 575.9 356 78.9
Psat4g195080 Pisum sativum HOM05D005285 ORTHO05D006829 3.8e-162 575.1 355 79.7
GSVIVG01032048001 Vitis vinifera HOM05D005285 ORTHO05D006829 3.8e-162 575.1 363 77.1
VMungo1127G2059 Vigna mungo HOM05D005285 ORTHO05D006829 6.5e-162 574.3 356 78.9
Rhsim01G0131200 Rhododendron simsii HOM05D005285 ORTHO05D006829 1.1e-161 573.5 365 76.4
MD07G1005600 Malus domestica HOM05D005285 ORTHO05D006829 1.4e-161 573.2 356 78.4
Nitab4.5_0002012g0040 Nicotiana tabacum HOM05D005285 ORTHO05D006829 1.9e-161 572.8 354 79.1
Ca_23856_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 2.5e-161 572.4 356 79.2
Glyma.12G239400 Glycine max HOM05D005285 ORTHO05D006829 2.5e-161 572.4 356 79.2
Cc02_g27470 Coffea canephora HOM05D005285 ORTHO05D006829 3.2e-161 572.0 360 78.1
Medtr8g036165 Medicago truncatula HOM05D005285 ORTHO05D006829 3.2e-161 572.0 356 78.1
FAN01G1197 Fragaria x ananassa HOM05D005285 ORTHO05D006829 4.2e-161 571.6 356 78.9
Nn7g36086 Nelumbo nucifera HOM05D005285 ORTHO05D006829 7.1e-161 570.9 371 76.3
Phvul.011G213800 Phaseolus vulgaris HOM05D005285 ORTHO05D006829 7.1e-161 570.9 356 78.4
Eucgr.J01254 Eucalyptus grandis HOM05D005285 ORTHO05D006829 9.3e-161 570.5 367 76.6
EL10Ac2g04308 Beta vulgaris HOM05D005285 ORTHO05D006829 1.2e-160 570.1 356 78.1
Eucgr.J01253 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.2e-160 570.1 367 76.3
Eucgr.J01256 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.2e-160 570.1 367 76.3
Migut.B01343 Erythranthe guttata HOM05D005285 ORTHO05D006829 1.6e-160 569.7 362 75.1
Lj3g0011351 Lotus japonicus HOM05D005285 ORTHO05D006829 3.5e-160 568.5 356 77.2
Hma1.2p1_1011F.1_g247500 Hydrangea macrophylla HOM05D005285 ORTHO05D006829 4.6e-160 568.2 387 73.4
Nitab4.5_0000050g0030 Nicotiana tabacum HOM05D005285 ORTHO05D006829 1.0e-159 567.0 353 77.9
Oeu064272.1 Olea europaea HOM05D005285 ORTHO05D006829 1.3e-159 566.6 357 78.2
Lsat_1_v5_gn_1_109141 Lactuca sativa HOM05D005285 ORTHO05D006829 2.3e-159 565.8 356 77.5
MSTRG.20606 Avicennia marina HOM05D005285 ORTHO05D006829 3.9e-159 565.1 365 75.9
Sopen10g011740 Solanum pennellii HOM05D005285 ORTHO05D006829 5.1e-159 564.7 358 77.7
PSO339G1127 Papaver somniferum HOM05D005285 ORTHO05D006829 6.7e-159 564.3 369 73.2
SalBow5G3096 Salvia bowleyana HOM05D005285 ORTHO05D006829 1.1e-158 563.5 362 75.4
SalBow5G3836 Salvia bowleyana HOM05D005285 ORTHO05D006829 1.5e-158 563.1 362 75.1
Aqoxy2G00109 Aquilegia oxysepala HOM05D005285 ORTHO05D006829 1.6e-157 559.7 360 74.2
arahy.Tifrunner.gnm1.ann1.DICK3U Arachis hypogaea HOM05D005285 ORTHO05D006829 1.6e-157 559.7 356 76.7
AUR62023050 Chenopodium quinoa HOM05D005285 ORTHO05D006829 2.2e-157 559.3 358 76.3
SGA_v2.0_scaffold646G53323 Striga asiatica HOM05D005285 ORTHO05D006829 2.2e-157 559.3 354 76.8
Hund03676 Selenicereus undatus HOM05D005285 ORTHO05D006829 2.8e-157 558.9 346 78.6
PSO384G1382 Papaver somniferum HOM05D005285 ORTHO05D006829 4.8e-157 558.1 369 72.4
ECA248G0026 Erigeron canadensis HOM05D005285 ORTHO05D006829 1.8e-156 556.2 354 76.0
Hund03675 Selenicereus undatus HOM05D005285 ORTHO05D006829 5.3e-156 554.7 389 71.5
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 1.5e-155 553.1 362 74.9
CDE04G1667 Ceratophyllum demersum HOM05D005285 ORTHO05D006829 2.9e-154 548.9 362 72.4
Os02g0717500 Oryza sativa ssp. japonica HOM05D005285 ORTHO05D006829 1.4e-153 546.6 355 74.4
unitig_26.g9596 Utricularia gibba HOM05D005285 ORTHO05D006829 9.4e-153 543.9 360 74.2
Zm00001eb189240 Zea mays HOM05D005285 ORTHO05D006829 1.2e-152 543.5 356 73.9
ATR0605G013 Amborella trichopoda HOM05D005285 ORTHO05D006829 3.9e-151 538.5 366 72.4
Sabra16G0166500 Salix brachista HOM05D005285 ORTHO05D006829 2.0e-150 536.2 440 63.6
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 4.3e-150 535.0 448 62.9
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 3.7e-149 531.9 330 77.9
Lj9C629T1 Lonicera japonica HOM05D005285 ORTHO05D006829 1.1e-148 530.4 352 72.7
vmacro21170 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 4.1e-148 528.5 412 66.5
ECA248G2079 Erigeron canadensis HOM05D005285 ORTHO05D006829 3.2e-145 518.8 360 69.2
HanXRQChr11g0330581 Helianthus annuus HOM05D005285 ORTHO05D006829 5.5e-145 518.1 360 69.4
SEGI_06931 Sequoiadendron giganteum HOM05D005285 ORTHO05D006829 7.2e-145 517.7 376 67.3
Lsat_1_v5_gn_1_111020 Lactuca sativa HOM05D005285 ORTHO05D006829 2.1e-144 516.2 360 68.3
QL04p004878 Quercus lobata HOM05D005285 ORTHO05D006829 1.1e-142 510.4 360 69.2
ECA248G2524 Erigeron canadensis HOM05D005285 ORTHO05D006829 4.4e-142 508.4 354 68.1
Atru.chr11.2010 Acer truncatum HOM05D005285 ORTHO05D006829 1.3e-141 506.9 350 70.0
QL04p004868 Quercus lobata HOM05D005285 ORTHO05D006829 2.2e-141 506.1 360 67.5
AagrBONN_evm.TU.Sc2ySwM_228.3236 Anthoceros agrestis HOM05D005285 ORTHO05D006829 3.7e-141 505.4 357 67.5
QL04p004849 Quercus lobata HOM05D005285 ORTHO05D006829 1.4e-140 503.4 363 65.3
SGA_v2.0_scaffold646G53324 Striga asiatica HOM05D005285 ORTHO05D006829 1.8e-140 503.1 456 57.2
Atru.chr11.2632 Acer truncatum HOM05D005285 ORTHO05D006829 4.5e-139 498.4 387 67.4
Mapoly0019s0106 Marchantia polymorpha HOM05D005285 ORTHO05D006829 7.7e-139 497.7 360 64.2
SMO364G0792 Selaginella moellendorffii HOM05D005285 ORTHO05D006829 1.3e-138 496.9 353 65.7
HanXRQChr11g0330561 Helianthus annuus HOM05D005285 ORTHO05D006829 2.2e-138 496.1 358 66.5
Prupe.2G008000 Prunus persica HOM05D005285 ORTHO05D006829 1.1e-134 483.8 272 86.0
SHI04065 Sapria himalayana HOM05D000259 ORTHO05D000155 1.4e-132 476.9 520 50.8
Prupe.2G008200 Prunus persica HOM05D005285 ORTHO05D006829 1.7e-122 443.4 251 84.5
Sed0008744 Sechium edule HOM05D005285 ORTHO05D006829 1.2e-120 437.2 344 66.0
Pp3c17_23530 Physcomitrium patens HOM05D005285 ORTHO05D006829 1.0e-119 434.1 385 56.9
Sc11g0009350 Simmondsia chinensis HOM05D005285 ORTHO05D006829 1.4e-119 433.7 270 77.4
HPP92_022786 Vanilla planifolia HOM05D005285 ORTHO05D006829 8.0e-112 407.9 273 72.5
Lsat_1_v5_gn_1_72821 Lactuca sativa HOM05D005285 ORTHO05D006829 5.8e-102 375.2 347 55.6
Ca_24082_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 7.5e-102 374.8 348 54.6
Pp3c14_26250 Physcomitrium patens HOM05D005285 ORTHO05D006829 2.9e-101 372.9 241 71.0
Cre13.g586400 Chlamydomonas reinhardtii HOM05D005285 ORTHO05D006829 6.4e-101 371.7 380 49.7
HanXRQChr11g0330591 Helianthus annuus HOM05D005285 ORTHO05D006829 9.2e-84 314.7 223 67.3
Solyc10g037950.2 Solanum lycopersicum HOM05D005285 ORTHO05D006829 1.6e-80 303.9 197 75.6
arahy.Tifrunner.gnm1.ann1.A7HRCY Arachis hypogaea HOM05D005285 ORTHO05D006829 7.6e-78 295.0 271 58.3
TPR.G21737 Trifolium pratense HOM05D005285 ORTHO05D006829 5.4e-76 288.9 164 84.8
HanXRQChr01g0017351 Helianthus annuus HOM05D005285 ORTHO05D006829 1.6e-72 277.3 180 72.2
Eucgr.L03705 Eucalyptus grandis HOM05D005285 ORTHO05D006829 9.0e-71 271.6 182 74.2
Solyc10g037960.3 Solanum lycopersicum HOM05D005285 ORTHO05D006829 9.0e-71 271.6 163 80.4
TPR.G21746 Trifolium pratense HOM05D005285 ORTHO05D006829 2.6e-70 270.0 180 71.7
Ca_24079_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 7.6e-70 268.5 347 45.8
Cpa.g.sc2760.1 Carica papaya HOM05D005285 ORTHO05D006829 2.8e-56 223.4 174 60.3
Rhsim06G0016300 Rhododendron simsii HOM05D005285 ORTHO05D006829 1.3e-50 204.5 118 82.2
HanXRQChr11g0330601 Helianthus annuus HOM05D005285 ORTHO05D006829 2.1e-43 180.6 106 78.3
Peaxi162Scf00451g00621 Petunia axillaris HOM05D005285 ORTHO05D006829 1.3e-40 171.4 171 55.0
Actinidia21565 Actinidia chinensis HOM05D005285 ORTHO05D006829 2.5e-33 147.1 103 74.8
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 1.7e-32 144.4 94 76.6
Atru.ctg794.7 Acer truncatum HOM05D005285 ORTHO05D037890 3.0e-26 123.6 177 43.5
Oeu039101.1 Olea europaea HOM05D000288 ORTHO05D000173 5.3e-23 112.8 88 63.6
vmacro21176 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 1.5e-20 104.8 112 53.6
Atru.chr13.2215 Acer truncatum HOM05D005285 ORTHO05D037890 1.8e-18 97.8 55 78.2
TPR.G13313 Trifolium pratense HOM05D005285 ORTHO05D413460 4.0e-18 96.7 77 62.3
CDE07G0090 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 4.8e-16 89.7 232 28.4
arahy.Tifrunner.gnm1.ann1.J91U4H Arachis hypogaea HOM05D000001 ORTHO05D004533 8.2e-16 89.0 62 62.9
Lsat_1_v5_gn_0_6420 Lactuca sativa HOM05D002112 ORTHO05D007960 3.5e-14 83.6 83 53.0
arahy.Tifrunner.gnm1.ann1.43BKZS Arachis hypogaea HOM05D000001 ORTHO05D000003 1.1e-12 78.6 67 55.2
VMungo1127G1344 Vigna mungo HOM05D000839 ORTHO05D000664 1.6e-11 74.7 72 59.7
TPR.G1074 Trifolium pratense HOM05D005285 ORTHO05D411165 2.6e-09 67.4 74 50.0
Oeu000043.1 Olea europaea HOM05D000206 ORTHO05D000232 1.8e-07 61.2 287 22.3
Migut.B01562 Erythranthe guttata HOM05D000206 ORTHO05D000232 2.0e-06 57.8 291 23.7
Haze_02858 Corylus avellana HOM05D000018 ORTHO05D003405 2.7e-06 57.4 291 24.4
Lsat_1_v5_gn_9_64201 Lactuca sativa HOM05D000310 ORTHO05D005377 2.7e-06 57.4 33 78.8
arahy.Tifrunner.gnm1.ann1.81AB3J Arachis hypogaea HOM05D000001 ORTHO05D084391 7.7e-06 55.8 43 55.8


User provided reference genes

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