Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p38520 Brassica napus HOM05D001498 ORTHO05D041705 6.7e-69 263.8 130 100.0
BolC3t17912H Brassica oleracea HOM05D001498 ORTHO05D011263 8.9e-53 210.3 119 87.4
BraA01t03045Z Brassica rapa HOM05D001498 ORTHO05D011263 5.7e-52 207.6 119 86.6
BraA08t32832Z Brassica rapa HOM05D001498 ORTHO05D011263 1.6e-49 199.5 123 83.7
BolC3t16976H Brassica oleracea HOM05D001498 ORTHO05D011263 5.0e-48 194.5 119 82.4
BraA08t32773Z Brassica rapa HOM05D001498 ORTHO05D011263 1.6e-46 189.5 119 83.2
C03p80470 Brassica napus HOM05D001498 ORTHO05D011448 4.7e-46 188.0 175 61.1
BolC6t38704H Brassica oleracea HOM05D001498 ORTHO05D011448 6.1e-46 187.6 170 61.2
C02p52010 Brassica napus HOM05D001498 ORTHO05D013028 1.4e-45 186.4 175 60.6
C08p08890 Brassica napus HOM05D001498 ORTHO05D011448 1.8e-45 186.0 175 60.6
C09p16600 Brassica napus HOM05D001498 ORTHO05D011448 1.8e-45 186.0 175 60.6
BolC3t18712H Brassica oleracea HOM05D001498 ORTHO05D011448 1.8e-45 186.0 175 60.6
A08p08110 Brassica napus HOM05D001498 ORTHO05D011448 2.3e-45 185.7 175 60.6
C09p19430 Brassica napus HOM05D001498 ORTHO05D013028 2.3e-45 185.7 175 60.6
C03p75890 Brassica napus HOM05D001498 ORTHO05D011448 5.2e-45 184.5 175 60.0
C07p30740 Brassica napus HOM05D001498 ORTHO05D011448 5.2e-45 184.5 175 60.6
BraA08t32949Z Brassica rapa HOM05D001498 ORTHO05D011263 5.2e-45 184.5 123 78.0
C03p66020 Brassica napus HOM05D001498 ORTHO05D011448 6.8e-45 184.1 175 60.0
C04p36720 Brassica napus HOM05D001498 ORTHO05D011448 6.8e-45 184.1 175 60.0
C05p34950 Brassica napus HOM05D001498 ORTHO05D011448 8.9e-45 183.7 175 60.6
C08p17900 Brassica napus HOM05D001498 ORTHO05D011448 8.9e-45 183.7 175 60.0
BolC8t49420H Brassica oleracea HOM05D001498 ORTHO05D011448 8.9e-45 183.7 175 60.0
C04p41870 Brassica napus HOM05D001498 ORTHO05D011448 2.6e-44 182.2 175 59.4
BolC6t36733H Brassica oleracea HOM05D001498 ORTHO05D011506 4.4e-44 181.4 175 59.4
BcaC02g10288 Brassica carinata HOM05D001498 ORTHO05D011448 7.5e-44 180.6 168 60.7
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 9.8e-44 180.3 175 59.4
C07p01260 Brassica napus HOM05D001498 ORTHO05D011448 1.3e-43 179.9 175 59.4
BcaC07g38655 Brassica carinata HOM05D001498 ORTHO05D011448 2.9e-43 178.7 160 62.5
BraA07t28351Z Brassica rapa HOM05D001498 ORTHO05D011448 1.4e-42 176.4 175 57.7
A08p06040 Brassica napus HOM05D001498 ORTHO05D013028 5.4e-42 174.5 175 57.1
A05p28410 Brassica napus HOM05D001498 ORTHO05D011448 2.0e-41 172.6 175 57.1
A08p09500 Brassica napus HOM05D001498 ORTHO05D011448 2.7e-41 172.2 175 57.1
BcaC01g06537 Brassica carinata HOM05D001498 ORTHO05D011448 1.7e-40 169.5 175 57.1
BolC3t13783H Brassica oleracea HOM05D001498 ORTHO05D011448 1.7e-40 169.5 175 57.1
A01p26280 Brassica napus HOM05D001498 ORTHO05D011448 5.0e-40 167.9 175 56.0
C06p18080 Brassica napus HOM05D001498 ORTHO05D011878 5.0e-40 167.9 95 88.4
C01p30540 Brassica napus HOM05D001498 ORTHO05D011263 6.6e-40 167.5 175 56.6
BolC9t57314H Brassica oleracea HOM05D001498 ORTHO05D011506 1.6e-38 162.9 99 83.8
C03p66360 Brassica napus HOM05D001498 ORTHO05D013028 2.8e-38 162.2 95 85.3
BolC6t36734H Brassica oleracea HOM05D001498 ORTHO05D011448 3.6e-38 161.8 95 85.3
BolC3t18909H Brassica oleracea HOM05D001498 ORTHO05D011448 3.1e-37 158.7 95 83.2
C01p48960 Brassica napus HOM05D001498 ORTHO05D013028 4.0e-37 158.3 93 84.9
C02p53480 Brassica napus HOM05D001498 ORTHO05D011448 4.0e-37 158.3 93 84.9
BraA08t32604Z Brassica rapa HOM05D001498 ORTHO05D011263 5.2e-37 157.9 97 81.4
C08p06700 Brassica napus HOM05D001498 ORTHO05D011448 8.9e-37 157.1 80 96.2
C03p56240 Brassica napus HOM05D001498 ORTHO05D011448 1.2e-36 156.8 80 96.2
BcaB04g18488 Brassica carinata HOM05D001498 ORTHO05D011448 2.6e-36 155.6 175 53.1
C03p44600 Brassica napus HOM05D001498 ORTHO05D011448 2.6e-36 155.6 143 63.6
A10p06620 Brassica napus HOM05D001498 ORTHO05D011448 5.8e-36 154.5 95 82.1
BolC7t45419H Brassica oleracea HOM05D001498 ORTHO05D011878 2.4e-34 149.1 79 92.4
C09p21190 Brassica napus HOM05D001498 ORTHO05D011448 5.4e-34 147.9 80 92.5
C09p28440 Brassica napus HOM05D001498 ORTHO05D013033 9.5e-31 137.1 145 55.2
A07p02030 Brassica napus HOM05D001498 ORTHO05D011448 6.2e-30 134.4 80 86.2
BolC3t18861H Brassica oleracea HOM05D001498 ORTHO05D041705 1.5e-28 129.8 64 96.9
A08p07530 Brassica napus HOM05D001498 ORTHO05D013028 7.5e-28 127.5 87 77.0
BcaC06g33590 Brassica carinata HOM05D001498 ORTHO05D093683 5.4e-26 121.3 139 54.0
BolC7t40542H Brassica oleracea HOM05D001498 ORTHO05D104051 3.9e-24 115.2 72 80.6
BolC3t19486H Brassica oleracea HOM05D001498 ORTHO05D013033 3.6e-22 108.6 129 51.2
BcaC07g38852 Brassica carinata HOM05D001498 ORTHO05D092219 3.0e-16 89.0 110 50.9
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 7.3e-15 84.3 95 52.6
BolC8t49066H Brassica oleracea HOM05D001498 ORTHO05D040409 1.8e-13 79.7 38 97.4
A03p54350 Brassica napus HOM05D001498 ORTHO05D040409 3.1e-13 79.0 37 100.0
BcaB01g01632 Brassica carinata HOM05D001498 ORTHO05D091966 3.4e-12 75.5 120 45.0
A01p28570 Brassica napus HOM05D001498 ORTHO05D013028 9.9e-12 73.9 119 42.0
C01p34360 Brassica napus HOM05D001498 ORTHO05D031765 8.4e-11 70.9 70 50.0
BolC1t03406H Brassica oleracea HOM05D001498 ORTHO05D031765 8.4e-11 70.9 70 50.0
BcaC09g49625 Brassica carinata HOM05D001498 ORTHO05D031765 1.1e-10 70.5 70 50.0
A07p05920 Brassica napus HOM05D007818 ORTHO05D015522 1.6e-09 66.6 67 44.8
C01p45320 Brassica napus HOM05D007818 ORTHO05D011878 1.6e-09 66.6 85 41.2
C01p41510 Brassica napus HOM05D007818 ORTHO05D015522 2.1e-09 66.2 85 41.2
A01p25450 Brassica napus HOM05D007818 ORTHO05D015522 2.7e-09 65.9 85 40.0
C07p11950 Brassica napus HOM05D007818 ORTHO05D015522 2.7e-09 65.9 85 41.2
BraA01t02469Z Brassica rapa HOM05D007818 ORTHO05D015522 2.7e-09 65.9 85 40.0
BolC6t36717H Brassica oleracea HOM05D007818 ORTHO05D011878 4.6e-09 65.1 85 40.0
BolC9t54650H Brassica oleracea HOM05D001498 ORTHO05D013033 4.6e-09 65.1 99 42.4
BolC9t59179H Brassica oleracea HOM05D007818 ORTHO05D011878 6.0e-09 64.7 85 40.0
BolC6t35450H Brassica oleracea HOM05D007818 ORTHO05D015522 7.8e-09 64.3 85 40.0
BraA01t01576Z Brassica rapa HOM05D007818 ORTHO05D015522 7.8e-09 64.3 85 40.0
C02p15660 Brassica napus HOM05D007818 ORTHO05D011878 1.0e-08 63.9 85 40.0
C06p26590 Brassica napus HOM05D007818 ORTHO05D015522 1.7e-08 63.2 85 40.0
BraA06t25340Z Brassica rapa HOM05D007818 ORTHO05D015522 2.3e-08 62.8 67 41.8
C05p36060 Brassica napus HOM05D007818 ORTHO05D015522 3.0e-08 62.4 85 38.8
BraA03t15276Z Brassica rapa HOM05D007818 ORTHO05D011878 3.0e-08 62.4 67 41.8
BcaB05g22882 Brassica carinata HOM05D007818 ORTHO05D011878 3.9e-08 62.0 67 41.8
BolC7t41573H Brassica oleracea HOM05D007818 ORTHO05D015522 3.9e-08 62.0 85 38.8
BcaC04g19840 Brassica carinata HOM05D007818 ORTHO05D018576 6.6e-08 61.2 79 36.7
C04p35200 Brassica napus HOM05D007818 ORTHO05D015522 6.6e-08 61.2 85 38.8
BolC5t32989H Brassica oleracea HOM05D007818 ORTHO05D011878 6.6e-08 61.2 85 38.8
BcaC06g36234 Brassica carinata HOM05D007818 ORTHO05D018576 8.7e-08 60.8 67 43.3
BcaB07g33141 Brassica carinata HOM05D013390 ORTHO05D092746 1.1e-07 60.5 59 47.5
C06p04890 Brassica napus HOM05D007818 ORTHO05D011878 1.9e-07 59.7 77 40.3
BcaC08g42821 Brassica carinata HOM05D007818 ORTHO05D018576 3.3e-07 58.9 67 41.8
BcaB03g16424 Brassica carinata HOM05D007818 ORTHO05D011878 4.3e-07 58.5 93 39.8
C09p27450 Brassica napus HOM05D001498 ORTHO05D013033 9.6e-07 57.4 27 96.3
A08p07520 Brassica napus HOM05D001498 ORTHO05D013033 2.8e-06 55.8 94 40.4


User provided reference genes

Program Settings