Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 1.5e-86 322.8 164 100.0
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 3.6e-51 205.3 102 99.0
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 1.3e-48 196.8 102 94.1
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 2.2e-48 196.1 102 92.2
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 4.9e-48 194.9 102 93.1
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 4.1e-47 191.8 102 92.2
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 5.4e-47 191.4 102 91.2
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 1.2e-46 190.3 102 90.2
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 1.6e-46 189.9 102 92.2
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 3.5e-46 188.7 102 90.2
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 5.0e-45 184.9 102 87.3
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 1.9e-44 183.0 98 89.8
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 1.9e-44 183.0 98 89.8
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 5.6e-44 181.4 98 87.8
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 5.6e-44 181.4 98 87.8
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 1.6e-43 179.9 97 88.7
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 9.2e-39 164.1 97 76.3
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 2.7e-38 162.5 108 70.4
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 6.0e-38 161.4 97 75.3
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 2.3e-37 159.5 98 74.5
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 1.5e-36 156.8 111 64.9
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 1.9e-36 156.4 79 96.2
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 2.5e-36 156.0 97 74.2
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 3.3e-36 155.6 92 77.2
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 9.5e-36 154.1 101 68.3
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 1.2e-35 153.7 102 67.6
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 2.1e-35 152.9 92 75.0
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 2.8e-35 152.5 110 67.3
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 4.7e-35 151.8 98 72.4
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 6.2e-35 151.4 97 80.4
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 6.2e-35 151.4 108 66.7
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 8.0e-35 151.0 97 69.1
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 8.0e-35 151.0 112 65.2
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 1.4e-34 150.2 102 70.6
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 1.4e-34 150.2 99 67.7
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 1.4e-34 150.2 108 65.7
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 1.4e-34 150.2 98 66.3
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 1.8e-34 149.8 111 64.9
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 1.8e-34 149.8 111 64.9
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 3.1e-34 149.1 91 73.6
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 4.0e-34 148.7 98 67.3
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 4.0e-34 148.7 108 66.7
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 6.8e-34 147.9 102 68.6
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 6.8e-34 147.9 91 72.5
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 6.8e-34 147.9 95 70.5
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 8.9e-34 147.5 110 67.3
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 8.9e-34 147.5 123 61.0
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 1.5e-33 146.7 92 70.7
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 2.0e-33 146.4 112 61.6
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 4.4e-33 145.2 96 68.8
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 5.8e-33 144.8 96 66.7
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 5.8e-33 144.8 96 66.7
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 5.8e-33 144.8 108 65.7
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 7.5e-33 144.4 107 62.6
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 7.5e-33 144.4 98 66.3
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 9.8e-33 144.1 108 63.9
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 9.8e-33 144.1 92 69.6
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 9.8e-33 144.1 92 69.6
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 9.8e-33 144.1 123 57.7
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 1.3e-32 143.7 97 64.9
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 1.7e-32 143.3 106 63.2
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 2.2e-32 142.9 96 65.6
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 2.9e-32 142.5 102 65.7
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 3.7e-32 142.1 108 61.1
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 3.7e-32 142.1 92 67.4
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 3.7e-32 142.1 104 64.4
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 3.7e-32 142.1 102 63.7
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 4.9e-32 141.7 92 67.4
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 4.9e-32 141.7 98 65.3
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 4.9e-32 141.7 96 64.6
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 4.9e-32 141.7 98 66.3
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 8.3e-32 141.0 92 68.5
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 8.3e-32 141.0 107 60.7
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 1.9e-31 139.8 111 60.4
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 1.9e-31 139.8 91 65.9
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 2.4e-31 139.4 107 63.6
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 2.4e-31 139.4 91 62.6
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 3.2e-31 139.0 91 68.1
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 3.2e-31 139.0 92 68.5
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 3.2e-31 139.0 89 70.8
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 4.1e-31 138.7 98 66.3
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 4.1e-31 138.7 96 64.6
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 7.0e-31 137.9 109 60.6
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 9.2e-31 137.5 91 64.8
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 2.1e-30 136.3 92 64.1
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 2.7e-30 136.0 92 68.5
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 3.5e-30 135.6 93 68.8
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 4.6e-30 135.2 103 62.1
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 4.6e-30 135.2 92 64.1
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 7.8e-30 134.4 100 65.0
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 1.7e-29 133.3 89 69.7
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 6.6e-29 131.3 133 51.1
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 1.1e-28 130.6 79 73.4
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 1.5e-28 130.2 97 61.9
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 1.9e-28 129.8 78 73.1
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 7.5e-25 117.9 93 58.1
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 4.9e-24 115.2 105 57.1
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 7.1e-23 111.3 98 57.1
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 2.7e-22 109.4 91 53.8
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-19 100.5 64 68.8
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 4.7e-19 98.6 103 45.6
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 3.1e-18 95.9 68 61.8
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 8.4e-16 87.8 51 84.3
AUR62018155 Chenopodium quinoa HOM05D006982 ORTHO05D008909 5.1e-13 78.6 50 72.0
PGSC0003DMG400033554 Solanum tuberosum HOM05D006982 ORTHO05D008909 2.9e-08 62.8 43 65.1


User provided reference genes

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