Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 1.4e-168 596.3 319 100.0
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 4.5e-167 591.3 319 99.4
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 6.8e-163 577.4 316 98.4
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 5.5e-157 557.8 320 95.3
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 5.5e-157 557.8 320 95.3
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 7.3e-149 530.8 320 91.2
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 4.7e-148 528.1 320 89.7
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 1.5e-146 523.1 324 84.6
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 1.4e-144 516.5 317 83.9
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 4.6e-143 511.5 321 88.2
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 4.4e-130 468.4 287 83.6
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 1.1e-123 447.2 318 72.6
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 3.1e-115 419.1 280 81.1
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 6.6e-110 401.4 326 65.3
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 7.3e-109 397.9 318 67.0
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 8.1e-108 394.4 326 64.4
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 9.0e-107 391.0 324 65.1
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.5e-106 390.2 324 64.8
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 1.5e-106 390.2 324 65.1
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 4.9e-105 385.2 318 65.4
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 6.4e-105 384.8 313 63.6
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 8.4e-105 384.4 314 65.3
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 1.9e-104 383.3 319 63.9
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 4.2e-104 382.1 315 62.9
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 7.1e-104 381.3 291 67.4
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 7.1e-104 381.3 313 65.5
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 1.6e-103 380.2 315 64.8
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 2.1e-103 379.8 322 63.0
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 2.3e-102 376.3 322 62.7
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 8.7e-102 374.4 318 64.2
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 2.5e-101 372.9 324 63.3
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 7.4e-101 371.3 312 62.8
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 1.3e-100 370.5 320 62.8
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.6e-100 370.2 333 60.7
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 2.8e-100 369.4 317 61.8
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 6.2e-100 368.2 325 61.5
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 8.1e-100 367.9 305 64.6
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 8.1e-100 367.9 319 63.6
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 1.4e-99 367.1 322 61.2
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 3.1e-99 365.9 262 71.0
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 4.0e-99 365.5 260 71.5
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 1.2e-98 364.0 321 64.5
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 2.0e-98 363.2 281 65.5
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 3.4e-98 362.5 322 62.4
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 4.5e-98 362.1 296 63.5
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 4.5e-98 362.1 296 63.5
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 1.3e-97 360.5 322 66.1
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 1.7e-97 360.1 314 62.1
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 3.8e-97 359.0 321 60.1
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 6.5e-97 358.2 316 62.7
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 8.4e-97 357.8 300 63.7
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 8.4e-97 357.8 321 59.8
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 1.9e-96 356.7 320 65.6
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 1.9e-96 356.7 321 60.7
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 2.5e-96 356.3 327 63.9
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 2.5e-96 356.3 318 60.1
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 3.2e-96 355.9 281 64.4
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 3.2e-96 355.9 325 62.2
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 3.2e-96 355.9 323 59.4
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 3.2e-96 355.9 258 69.4
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 9.3e-96 354.4 313 61.0
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 9.3e-96 354.4 322 59.0
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 1.2e-95 354.0 313 59.1
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 3.5e-95 352.4 313 60.4
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 3.5e-95 352.4 313 58.8
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 1.3e-94 350.5 281 63.0
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 1.8e-94 350.1 321 59.2
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 3.0e-94 349.4 316 58.5
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 3.9e-94 349.0 323 59.1
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 3.9e-94 349.0 289 63.3
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 5.1e-94 348.6 316 58.5
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 6.7e-94 348.2 297 61.6
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 8.7e-94 347.8 316 57.6
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 1.9e-93 346.7 322 59.3
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 2.8e-92 342.8 305 58.7
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 3.7e-92 342.4 293 63.8
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 6.2e-92 341.7 295 62.7
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 1.4e-91 340.5 279 64.5
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 5.3e-91 338.6 260 66.9
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 2.0e-90 336.7 212 76.4
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 2.6e-90 336.3 269 68.0
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 7.6e-90 334.7 259 66.0
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 1.0e-89 334.3 289 59.2
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 1.8e-86 323.6 340 54.1
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 8.7e-86 321.2 276 59.8
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.9e-85 320.1 214 74.8
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 1.1e-83 314.3 292 57.9
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 6.9e-83 311.6 212 74.1
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.5e-82 310.5 298 56.0
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 2.0e-82 310.1 270 58.5
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 2.6e-82 309.7 291 59.8
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 3.4e-82 309.3 200 76.0
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 3.8e-81 305.8 293 55.3
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 1.1e-75 287.7 179 77.1
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 1.4e-75 287.3 276 58.3
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 4.1e-75 285.8 179 79.3
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 6.9e-75 285.0 225 64.4
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 7.2e-72 275.0 162 80.9
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 9.7e-69 264.6 299 49.8
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 7.0e-67 258.5 183 71.6
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 9.4e-64 248.1 206 57.8
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 1.4e-62 244.2 208 58.2
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 1.8e-62 243.8 197 61.9
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 2.2e-60 236.9 209 56.9
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 3.7e-60 236.1 203 60.6
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 9.1e-59 231.5 196 61.7
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 1.6e-55 220.7 231 61.0
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 2.7e-50 203.4 210 51.4
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 9.8e-45 184.9 165 55.2
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 1.7e-41 174.1 202 43.1
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 1.1e-40 171.4 126 62.7
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 1.6e-39 167.5 215 41.4
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 5.2e-30 136.0 88 72.7
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 8.9e-30 135.2 120 55.0
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 1.1e-27 128.3 97 66.0
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 2.4e-27 127.1 86 74.4
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 8.9e-22 108.6 60 88.3
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 7.1e-19 99.0 68 76.5
Cpa.g.sc14.61 Carica papaya HOM05D006434 ORTHO05D008069 2.7e-10 70.5 115 43.5
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 4.6e-10 69.7 37 86.5
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 2.4e-06 57.4 134 30.6


User provided reference genes

Program Settings