Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p37510 Brassica napus HOM05D009946 ORTHO05D004401 8.5e-35 149.8 78 100.0
BolC7t44264H Brassica oleracea HOM05D009946 ORTHO05D004401 8.5e-35 149.8 78 100.0
A06p40520 Brassica napus HOM05D009946 ORTHO05D004401 2.8e-30 134.8 79 91.1
BraA06t26971Z Brassica rapa HOM05D009946 ORTHO05D004401 2.8e-30 134.8 79 91.1
BcaC06g33736 Brassica carinata HOM05D009946 ORTHO05D004401 6.5e-27 123.6 66 95.5
Sp2g17220 Schrenkiella parvula HOM05D009946 ORTHO05D004401 2.1e-25 118.6 82 79.3
Carub.0005s0698 Capsella rubella HOM05D009946 ORTHO05D004401 8.0e-25 116.7 82 78.0
AL5G18080 Arabidopsis lyrata HOM05D009946 ORTHO05D004401 1.4e-24 115.9 82 76.8
AT3G28455 Arabidopsis thaliana HOM05D009946 ORTHO05D004401 2.3e-24 115.2 82 75.6
C09p03880 Brassica napus HOM05D009946 ORTHO05D004401 5.2e-24 114.0 82 78.0
Thhalv10005220m.g Eutrema salsugineum HOM05D009946 ORTHO05D004401 5.2e-24 114.0 82 76.8
A09p03680 Brassica napus HOM05D009946 ORTHO05D004401 2.0e-23 112.1 82 76.8
BolC9t53314H Brassica oleracea HOM05D009946 ORTHO05D004401 2.6e-23 111.7 82 76.8
CARHR292510 Cardamine hirsuta HOM05D009946 ORTHO05D004401 4.4e-23 110.9 82 72.0
BcaC03g17517 Brassica carinata HOM05D009946 ORTHO05D004401 1.8e-21 105.5 82 74.4
BolC2t11540H Brassica oleracea HOM05D009946 ORTHO05D004401 1.8e-21 105.5 82 74.4
BcaC04g23875 Brassica carinata HOM05D009946 ORTHO05D004401 3.8e-19 97.8 75 73.3
BcaB04g19463 Brassica carinata HOM05D009946 ORTHO05D004401 6.6e-19 97.1 70 75.7
BraA09t36003Z Brassica rapa HOM05D009946 ORTHO05D004401 1.1e-18 96.3 82 67.1
A02p35950 Brassica napus HOM05D009946 ORTHO05D004401 2.5e-18 95.1 70 74.3
BraA02t08594Z Brassica rapa HOM05D009946 ORTHO05D004401 2.5e-18 95.1 70 74.3
C02p54790 Brassica napus HOM05D009946 ORTHO05D004401 3.3e-18 94.7 70 74.3
Thhalv10028314m.g Eutrema salsugineum HOM05D009946 ORTHO05D004401 9.2e-13 76.6 77 55.8
Aa31LG2G4620 Aethionema arabicum HOM05D009946 ORTHO05D004401 2.3e-11 72.0 77 57.1
Sp7g02070 Schrenkiella parvula HOM05D009946 ORTHO05D004401 1.2e-09 66.2 74 54.1
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 8.9e-08 60.1 94 43.6
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 2.0e-07 58.9 91 39.6
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 4.4e-07 57.8 91 44.0
COL.COLO4_36990 Corchorus olitorius HOM05D004965 ORTHO05D004401 5.8e-07 57.4 49 59.2
Gohir.A07G216700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 3.7e-06 54.7 83 38.6
Manes.15G177900 Manihot esculenta HOM05D004965 ORTHO05D004401 3.7e-06 54.7 81 44.4
CANSAT64G1053 Cannabis sativa HOM05D004965 ORTHO05D004401 8.3e-06 53.5 62 45.2


User provided reference genes

Program Settings