Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 6.8e-113 411.0 260 100.0
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 2.0e-104 382.9 263 95.1
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 3.2e-102 375.6 263 94.7
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 2.1e-101 372.9 266 93.2
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 4.3e-99 365.2 257 94.9
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 3.2e-94 349.0 284 82.4
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 5.8e-88 328.2 262 83.6
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 1.5e-72 276.9 272 76.5
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 2.2e-63 246.5 221 76.0
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 1.1e-62 244.2 238 76.1
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 2.3e-60 236.5 220 80.5
Thhalv10004882m.g Eutrema salsugineum HOM05D007214 ORTHO05D008907 3.7e-50 202.6 223 73.1
BraA06t26977Z Brassica rapa HOM05D007214 ORTHO05D008907 1.8e-49 200.3 226 73.0
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 8.5e-47 191.4 264 61.4
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 3.2e-46 189.5 218 67.0
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 5.7e-43 178.7 262 43.1
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 7.0e-41 171.8 223 56.5
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 1.9e-38 163.7 264 41.3
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 4.0e-36 156.0 264 39.0
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 3.5e-32 142.9 223 55.6
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 1.7e-31 140.6 267 35.2
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.9e-31 139.8 282 41.8
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 3.8e-31 139.4 227 38.8
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 5.0e-31 139.0 225 40.0
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 4.2e-30 136.0 226 39.8
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 4.2e-30 136.0 225 47.6
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.2e-29 134.4 282 36.2
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 2.1e-29 133.7 275 33.5
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 1.0e-28 131.3 294 34.7
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 1.2e-27 127.9 304 35.5
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 2.6e-27 126.7 298 35.6
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 5.7e-27 125.6 266 43.2
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 3.1e-25 119.8 267 44.9
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 4.1e-25 119.4 222 54.1
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 8.6e-23 111.7 264 32.6
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 1.5e-22 110.9 262 33.6
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 1.9e-22 110.5 219 35.6
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 2.5e-22 110.2 231 36.8
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 1.2e-21 107.8 257 32.7
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 1.6e-21 107.5 227 33.0
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 2.8e-21 106.7 215 38.6
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 2.8e-21 106.7 224 33.5
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 1.4e-20 104.4 227 33.5
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 2.3e-20 103.6 215 33.5
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 2.0e-19 100.5 264 42.8
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 2.0e-19 100.5 229 39.7
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 2.6e-19 100.1 227 35.2
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 2.6e-19 100.1 241 32.0
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 9.8e-19 98.2 223 34.1
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 1.7e-18 97.4 240 45.4
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 2.2e-18 97.1 124 43.5
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 3.7e-18 96.3 190 55.8
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 1.1e-17 94.7 217 32.7
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 1.1e-17 94.7 227 39.6
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 1.8e-17 94.0 223 33.2
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 2.4e-17 93.6 125 45.6
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 3.2e-17 93.2 223 40.8
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 4.1e-17 92.8 224 48.2
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 1.2e-16 91.3 222 47.7
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 3.5e-16 89.7 268 43.3
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 6.0e-16 89.0 227 37.4
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 6.0e-16 89.0 224 44.6
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 1.3e-15 87.8 216 36.6
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 2.3e-15 87.0 254 29.9
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 5.0e-15 85.9 257 39.7
Thecc.04G070100 Theobroma cacao HOM05D007214 ORTHO05D008907 9.5e-14 81.6 189 48.7
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 1.2e-13 81.3 122 54.1
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 6.8e-12 75.5 224 42.4
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 8.9e-12 75.1 112 42.0
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 1.5e-11 74.3 115 42.6
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 2.0e-11 73.9 263 35.0
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 7.5e-11 72.0 74 51.4
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 1.3e-10 71.2 205 48.8
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 6.4e-10 68.9 233 35.2
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 6.4e-10 68.9 122 40.2
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 8.3e-10 68.6 209 45.5
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 1.1e-09 68.2 258 35.7
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 2.4e-09 67.0 228 27.2
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 3.2e-09 66.6 212 37.3
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 4.1e-09 66.2 126 34.9
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 5.4e-09 65.9 262 27.5
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 2.1e-08 63.9 205 29.8
Sabra17G0065100 Salix brachista HOM05D007214 ORTHO05D008907 3.5e-08 63.2 99 37.4
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 1.0e-07 61.6 222 32.9
CDE02G1584 Ceratophyllum demersum HOM05D007214 ORTHO05D008907 3.0e-07 60.1 122 37.7
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 3.0e-07 60.1 79 36.7
Sabra17G0063300 Salix brachista HOM05D007214 ORTHO05D008907 3.9e-07 59.7 68 44.1
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 5.0e-07 59.3 193 36.3
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 8.6e-07 58.5 224 34.4
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 2.5e-06 57.0 216 26.9
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 9.5e-06 55.1 124 36.3
Oeu060589.1 Olea europaea HOM05D007214 ORTHO05D008907 9.5e-06 55.1 79 57.0


User provided reference genes

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