Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p37320 Brassica napus HOM05D003692 ORTHO05D004295 7.8e-100 367.1 179 100.0
BolC7t44242H Brassica oleracea HOM05D003692 ORTHO05D004295 6.4e-78 294.3 159 89.3
BcaC07g39737 Brassica carinata HOM05D003692 ORTHO05D004295 3.9e-35 152.1 82 92.7
C08p29100 Brassica napus HOM05D003692 ORTHO05D004295 3.9e-35 152.1 82 92.7
BolC8t50511H Brassica oleracea HOM05D003692 ORTHO05D004295 3.9e-35 152.1 82 92.7
BcaB01g00236 Brassica carinata HOM05D003692 ORTHO05D004295 1.1e-34 150.6 82 91.5
A09p46790 Brassica napus HOM05D003692 ORTHO05D004295 9.7e-34 147.5 82 90.2
BraA09t40139Z Brassica rapa HOM05D003692 ORTHO05D004295 4.8e-33 145.2 82 89.0
Sp5g08580 Schrenkiella parvula HOM05D003692 ORTHO05D004295 2.6e-31 139.4 82 86.6
Thhalv10010482m.g Eutrema salsugineum HOM05D003692 ORTHO05D004295 8.5e-30 134.4 82 82.9
Carub.0005s2038 Capsella rubella HOM05D003692 ORTHO05D004295 8.0e-28 127.9 82 78.0
AL5G34790 Arabidopsis lyrata HOM05D003692 ORTHO05D004295 1.0e-27 127.5 82 78.0
THA.LOC104823413 Tarenaya hassleriana HOM05D003692 ORTHO05D004295 1.1e-26 124.0 82 73.2
FAN09G2852 Fragaria x ananassa HOM05D003692 ORTHO05D004295 5.3e-24 115.2 82 65.9
Nitab4.5_0003394g0020 Nicotiana tabacum HOM05D003692 ORTHO05D004295 5.3e-24 115.2 135 47.4
FAN02G3395 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.2e-23 114.0 82 64.6
FAN05G1146 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.2e-23 114.0 82 64.6
FvH4_6g11350 Fragaria vesca HOM05D003692 ORTHO05D004295 1.6e-23 113.6 82 63.4
FAN14G0506 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.6e-23 113.6 82 63.4
FAN14G3612 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.6e-23 113.6 82 63.4
PSO478G2467 Papaver somniferum HOM05D003692 ORTHO05D004295 1.6e-23 113.6 92 58.7
Ah.12g059970 Amaranthus hybridus HOM05D003692 ORTHO05D004295 2.0e-23 113.2 82 64.6
FvH4_5g15390 Fragaria vesca HOM05D003692 ORTHO05D004295 2.0e-23 113.2 82 64.6
FAN18G0330 Fragaria x ananassa HOM05D003692 ORTHO05D004295 2.0e-23 113.2 82 64.6
PGR031G2878 Punica granatum HOM05D003692 ORTHO05D004295 2.0e-23 113.2 80 65.0
Hund29077 Selenicereus undatus HOM05D003692 ORTHO05D004295 2.0e-23 113.2 86 62.8
FAN08G2733 Fragaria x ananassa HOM05D003692 ORTHO05D004295 2.6e-23 112.8 82 65.9
Thecc.05G036000 Theobroma cacao HOM05D003692 ORTHO05D004295 3.5e-23 112.5 80 65.0
SEGI_14146 Sequoiadendron giganteum HOM05D003692 ORTHO05D004295 4.5e-23 112.1 80 65.0
SGA_v2.0_scaffold94G28572 Striga asiatica HOM05D003692 ORTHO05D004295 4.5e-23 112.1 82 63.4
RcHm_v2.0_Chr7g0180681 Rosa chinensis HOM05D003692 ORTHO05D004295 5.9e-23 111.7 82 63.4
FAN13G1535 Fragaria x ananassa HOM05D003692 ORTHO05D004295 7.7e-23 111.3 82 64.6
Nitab4.5_0000705g0070 Nicotiana tabacum HOM05D003692 ORTHO05D004295 7.7e-23 111.3 82 63.4
QL07p030140 Quercus lobata HOM05D003692 ORTHO05D004295 7.7e-23 111.3 82 62.2
QL07p030873 Quercus lobata HOM05D003692 ORTHO05D004295 7.7e-23 111.3 82 62.2
unitig_8.g4279 Utricularia gibba HOM05D003692 ORTHO05D004295 7.7e-23 111.3 82 67.1
MSTRG.19074 Avicennia marina HOM05D003692 ORTHO05D004295 1.0e-22 110.9 82 64.6
EL10As1g23134 Beta vulgaris HOM05D003692 ORTHO05D004295 1.0e-22 110.9 82 64.6
ClCG04G008060 Citrullus lanatus HOM05D003692 ORTHO05D004295 1.0e-22 110.9 96 55.2
HanXRQChr01g0003311 Helianthus annuus HOM05D003692 ORTHO05D004295 1.7e-22 110.2 80 65.0
PSO513G0124 Papaver somniferum HOM05D003692 ORTHO05D004295 1.7e-22 110.2 80 61.2
SGA_v2.0_scaffold126G33762 Striga asiatica HOM05D003692 ORTHO05D004295 1.7e-22 110.2 82 63.4
HPP92_006643 Vanilla planifolia HOM05D003692 ORTHO05D004295 1.7e-22 110.2 82 61.0
Zm00001eb062800 Zea mays HOM05D003692 ORTHO05D004295 1.7e-22 110.2 82 62.2
CARHR163710 Cardamine hirsuta HOM05D003692 ORTHO05D004295 2.2e-22 109.8 69 81.2
PSO339G0014 Papaver somniferum HOM05D003692 ORTHO05D004295 2.2e-22 109.8 80 61.2
CsaV3_4G025150 Cucumis sativus L. HOM05D003692 ORTHO05D004295 2.9e-22 109.4 82 62.2
Lalb_Chr12g0209541 Lupinus albus HOM05D003692 ORTHO05D004295 2.9e-22 109.4 80 66.2
Hund07758 Selenicereus undatus HOM05D003692 ORTHO05D004295 2.9e-22 109.4 80 63.8
SGA_v2.0_scaffold75G24963 Striga asiatica HOM05D003692 ORTHO05D004295 2.9e-22 109.4 82 63.4
THA.LOC104816257 Tarenaya hassleriana HOM05D003692 ORTHO05D004295 2.9e-22 109.4 82 61.0
CANSAT35G0909 Cannabis sativa HOM05D003692 ORTHO05D004295 3.8e-22 109.0 80 62.5
MELO3C003143.2 Cucumis melo HOM05D003692 ORTHO05D004295 3.8e-22 109.0 82 61.0
Glyma.03G070400 Glycine max HOM05D003692 ORTHO05D004295 3.8e-22 109.0 80 65.0
Lsat_1_v5_gn_5_154881 Lactuca sativa HOM05D003692 ORTHO05D004295 3.8e-22 109.0 80 62.5
COL.COLO4_14767 Corchorus olitorius HOM05D003692 ORTHO05D004295 5.0e-22 108.6 80 62.5
Eucgr.A01287 Eucalyptus grandis HOM05D003692 ORTHO05D004295 5.0e-22 108.6 80 65.0
Glyma.01G103200 Glycine max HOM05D003692 ORTHO05D004295 5.0e-22 108.6 80 65.0
Lalb_Chr07g0192991 Lupinus albus HOM05D003692 ORTHO05D004295 5.0e-22 108.6 80 65.0
Rhsim05G0194700 Rhododendron simsii HOM05D003692 ORTHO05D004295 5.0e-22 108.6 79 63.3
TWI38G1706 Tripterygium wilfordii HOM05D003692 ORTHO05D004295 5.0e-22 108.6 82 62.2
AagrBONN_evm.TU.Sc2ySwM_368.3385 Anthoceros agrestis HOM05D003692 ORTHO05D004295 6.5e-22 108.2 78 64.1
Ciclev10011911m.g Citrus clementina HOM05D003692 ORTHO05D004295 6.5e-22 108.2 82 63.4
Duzib128G0550 Durio zibethinus HOM05D003692 ORTHO05D004295 6.5e-22 108.2 80 63.8
RcHm_v2.0_Chr3g0462931 Rosa chinensis HOM05D003692 ORTHO05D004295 6.5e-22 108.2 82 59.8
PGSC0003DMG400008824 Solanum tuberosum HOM05D003692 ORTHO05D004295 6.5e-22 108.2 83 63.9
arahy.Tifrunner.gnm1.ann1.C3169U Arachis hypogaea HOM05D003692 ORTHO05D004295 8.5e-22 107.8 80 63.8
Oeu006893.1 Olea europaea HOM05D003692 ORTHO05D004295 8.5e-22 107.8 79 62.0
Prupe.6G258500 Prunus persica HOM05D003692 ORTHO05D004295 8.5e-22 107.8 82 61.0
arahy.Tifrunner.gnm1.ann1.R5ZI8K Arachis hypogaea HOM05D003692 ORTHO05D004295 1.1e-21 107.5 80 63.8
Cc06_g02380 Coffea canephora HOM05D003692 ORTHO05D004295 1.1e-21 107.5 82 63.4
Gohir.D04G122300 Gossypium hirsutum HOM05D003692 ORTHO05D004295 1.1e-21 107.5 80 62.5
Gorai.012G105200 Gossypium raimondii HOM05D003692 ORTHO05D004295 1.1e-21 107.5 80 62.5
Lj3g0027938 Lotus japonicus HOM05D003692 ORTHO05D004295 1.1e-21 107.5 78 62.8
Atru.chr8.2010 Acer truncatum HOM05D003692 ORTHO05D004295 1.5e-21 107.1 80 65.0
Aa31LG3G1840 Aethionema arabicum HOM05D003692 ORTHO05D004295 1.5e-21 107.1 82 59.8
ATR0559G081 Amborella trichopoda HOM05D003692 ORTHO05D004295 1.5e-21 107.1 82 61.0
BcaC01g04230 Brassica carinata HOM05D003692 ORTHO05D004295 1.5e-21 107.1 82 59.8
BolC3t16634H Brassica oleracea HOM05D003692 ORTHO05D004295 1.5e-21 107.1 82 59.8
CAN.G397.48 Capsicum annuum HOM05D003692 ORTHO05D004295 1.5e-21 107.1 82 59.8
CiPaw.09G195400 Carya illinoinensis HOM05D003692 ORTHO05D004295 1.5e-21 107.1 82 59.8
Sabra06G0067100 Salix brachista HOM05D003692 ORTHO05D004295 1.5e-21 107.1 93 51.6
Actinidia26484 Actinidia chinensis HOM05D003692 ORTHO05D004295 1.9e-21 106.7 82 61.0
CSS0021952 Camellia sinensis var. sinensis HOM05D003692 ORTHO05D004295 1.9e-21 106.7 82 62.2
MD12G1145000 Malus domestica HOM05D003692 ORTHO05D004295 1.9e-21 106.7 82 61.0
Potri.016G100500 Populus trichocarpa HOM05D003692 ORTHO05D004295 1.9e-21 106.7 82 59.8
Sopen09g005760 Solanum pennellii HOM05D003692 ORTHO05D004295 2.5e-21 106.3 83 62.7
GSVIVG01034132001 Vitis vinifera HOM05D003692 ORTHO05D004295 2.5e-21 106.3 82 59.8
CAN.G947.5 Capsicum annuum HOM05D003692 ORTHO05D004295 3.2e-21 105.9 83 61.4
MD04G1131900 Malus domestica HOM05D003692 ORTHO05D004295 3.2e-21 105.9 82 59.8
Potri.006G088000 Populus trichocarpa HOM05D003692 ORTHO05D004295 3.2e-21 105.9 82 59.8
Solyc09g011030.3 Solanum lycopersicum HOM05D003692 ORTHO05D004295 3.2e-21 105.9 83 62.7
Cpa.g.sc40.66 Carica papaya HOM05D003692 ORTHO05D004295 4.2e-21 105.5 82 59.8
Lj2A91G57 Lonicera japonica HOM05D003692 ORTHO05D004295 4.2e-21 105.5 82 62.2
Oeu023073.1 Olea europaea HOM05D003692 ORTHO05D004295 4.2e-21 105.5 82 61.0
Phvul.010G011500 Phaseolus vulgaris HOM05D003692 ORTHO05D004295 4.2e-21 105.5 80 62.5
VMungo0331G1001 Vigna mungo HOM05D003692 ORTHO05D004295 4.2e-21 105.5 80 62.5
Actinidia11270 Actinidia chinensis HOM05D003692 ORTHO05D004295 5.5e-21 105.1 82 61.0
MSTRG.10251 Avicennia marina HOM05D003692 ORTHO05D004295 5.5e-21 105.1 82 59.8
A03p36010 Brassica napus HOM05D003692 ORTHO05D004295 5.5e-21 105.1 82 57.3
Manes.09G092685 Manihot esculenta HOM05D003692 ORTHO05D004295 5.5e-21 105.1 82 59.8
Os03g0822700 Oryza sativa ssp. japonica HOM05D003692 ORTHO05D004295 5.5e-21 105.1 82 59.8
Aqoxy1G00886 Aquilegia oxysepala HOM05D003692 ORTHO05D004295 7.2e-21 104.8 82 58.5
C03p43660 Brassica napus HOM05D003692 ORTHO05D004295 7.2e-21 104.8 82 58.5
BraA03t12773Z Brassica rapa HOM05D003692 ORTHO05D004295 7.2e-21 104.8 80 57.5
Carub.0006s0099 Capsella rubella HOM05D003692 ORTHO05D004295 7.2e-21 104.8 82 57.3
Cfa017343 Carpinus fangiana HOM05D003692 ORTHO05D004295 7.2e-21 104.8 82 58.5
Hma1.2p1_0877F.1_g231720 Hydrangea macrophylla HOM05D003692 ORTHO05D004295 7.2e-21 104.8 82 59.8
Peaxi162Scf00527g00735 Petunia axillaris HOM05D003692 ORTHO05D004295 7.2e-21 104.8 83 61.4
TAR560G0002 Trochodendron aralioides HOM05D003692 ORTHO05D004295 7.2e-21 104.8 82 59.8
TAR623G0629 Trochodendron aralioides HOM05D003692 ORTHO05D004295 7.2e-21 104.8 82 59.8
Actinidia05324 Actinidia chinensis HOM05D003692 ORTHO05D004295 9.4e-21 104.4 80 61.2
BcaB03g11607 Brassica carinata HOM05D003692 ORTHO05D004295 1.2e-20 104.0 82 58.5
Ca_11500_v3 Cicer arietinum L. HOM05D003692 ORTHO05D004295 1.2e-20 104.0 80 61.2
DCAR_012112 Daucus carota HOM05D003692 ORTHO05D004295 1.2e-20 104.0 82 59.8
HanXRQChr13g0406761 Helianthus annuus HOM05D003692 ORTHO05D004295 1.2e-20 104.0 80 62.5
AL6G11380 Arabidopsis lyrata HOM05D003692 ORTHO05D004295 1.6e-20 103.6 82 56.1
BraA05t22745Z Brassica rapa HOM05D003692 ORTHO05D004295 1.6e-20 103.6 82 58.5
Thhalv10020978m.g Eutrema salsugineum HOM05D003692 ORTHO05D004295 1.6e-20 103.6 82 58.5
AL3G20500 Arabidopsis lyrata HOM05D003692 ORTHO05D004295 2.1e-20 103.2 82 58.5
BcaC05g29662 Brassica carinata HOM05D003692 ORTHO05D004295 2.1e-20 103.2 82 58.5
A05p39620 Brassica napus HOM05D002396 ORTHO05D004295 2.1e-20 103.2 82 58.5
BolC5t34516H Brassica oleracea HOM05D003692 ORTHO05D004295 2.1e-20 103.2 82 58.5
CDE07G1498 Ceratophyllum demersum HOM05D003692 ORTHO05D004295 2.1e-20 103.2 82 59.8
Haze_20825 Corylus avellana HOM05D003692 ORTHO05D004295 2.1e-20 103.2 82 58.5
Gohir.A04G083600 Gossypium hirsutum HOM05D003692 ORTHO05D004295 2.1e-20 103.2 80 60.0
Medtr4g021570 Medicago truncatula HOM05D003692 ORTHO05D004295 2.7e-20 102.8 78 62.8
Psat7g237280 Pisum sativum HOM05D003692 ORTHO05D004295 2.7e-20 102.8 80 61.2
TAR369G0528 Trochodendron aralioides HOM05D003692 ORTHO05D004295 2.7e-20 102.8 82 59.8
AT3G09350 Arabidopsis thaliana HOM05D003692 ORTHO05D004295 3.6e-20 102.4 82 57.3
CARHR083710 Cardamine hirsuta HOM05D003692 ORTHO05D004295 3.6e-20 102.4 82 57.3
BcaC05g29519 Brassica carinata HOM05D003692 ORTHO05D004295 4.7e-20 102.1 82 57.3
C05p58660 Brassica napus HOM05D003692 ORTHO05D004295 4.7e-20 102.1 82 57.3
Lj3A965G75 Lonicera japonica HOM05D003692 ORTHO05D004295 4.7e-20 102.1 82 58.5
ECA248G3834 Erigeron canadensis HOM05D003692 ORTHO05D004295 6.1e-20 101.7 80 60.0
Sed0012536 Sechium edule HOM05D003692 ORTHO05D004295 6.1e-20 101.7 82 57.3
Oeu001856.1 Olea europaea HOM05D003692 ORTHO05D004295 8.0e-20 101.3 82 61.0
Carub.0003s0846 Capsella rubella HOM05D003692 ORTHO05D004295 1.0e-19 100.9 82 56.1
AUR62043522 Chenopodium quinoa HOM05D003692 ORTHO05D004295 1.0e-19 100.9 69 69.6
Thhalv10014140m.g Eutrema salsugineum HOM05D003692 ORTHO05D004295 1.0e-19 100.9 82 53.7
Mapoly0070s0083 Marchantia polymorpha HOM05D003692 ORTHO05D004295 1.0e-19 100.9 95 52.6
Sp3g07730 Schrenkiella parvula HOM05D003692 ORTHO05D004295 1.0e-19 100.9 82 57.3
Sp6g40290 Schrenkiella parvula HOM05D003692 ORTHO05D004295 1.0e-19 100.9 79 54.4
TPR.G5579 Trifolium pratense HOM05D003692 ORTHO05D004295 1.0e-19 100.9 78 61.5
AT5G02150 Arabidopsis thaliana HOM05D003692 ORTHO05D004295 1.4e-19 100.5 82 54.9
CARHR211210 Cardamine hirsuta HOM05D003692 ORTHO05D004295 3.0e-19 99.4 82 53.7
AUR62042383 Chenopodium quinoa HOM05D003692 ORTHO05D004295 4.0e-19 99.0 75 62.7
vmacro20176 Vaccinium macrocarpon HOM05D003692 ORTHO05D004295 6.8e-19 98.2 68 66.2
CBR_g66724 Chara braunii HOM05D003692 ORTHO05D004295 1.2e-18 97.4 77 59.7
Pp3c16_19440 Physcomitrium patens HOM05D003692 ORTHO05D004295 1.2e-18 97.4 78 59.0
Dinv35578 Davidia involucrata HOM05D003692 ORTHO05D004295 1.5e-18 97.1 69 65.2
Migut.J00308 Erythranthe guttata HOM05D003692 ORTHO05D004295 2.0e-18 96.7 80 55.0
SMO302G0018 Selaginella moellendorffii HOM05D003692 ORTHO05D004295 5.7e-18 95.1 79 51.9
Pp3c5_26180 Physcomitrium patens HOM05D003692 ORTHO05D004295 1.3e-17 94.0 80 57.5
ECA248G3146 Erigeron canadensis HOM05D003692 ORTHO05D004295 8.3e-17 91.3 77 54.5
AT3G53800 Arabidopsis thaliana HOM05D003692 ORTHO05D004295 1.4e-16 90.5 58 81.0
ECA248G3804 Erigeron canadensis HOM05D003692 ORTHO05D004295 1.6e-15 87.0 80 52.5
Os03g0271400 Oryza sativa ssp. japonica HOM05D003692 ORTHO05D004295 1.3e-14 84.0 83 48.2
MBI05_g35626_MAGBIO Magnolia biondii HOM05D003692 ORTHO05D004295 2.9e-14 82.8 63 57.1
Nn2g13418 Nelumbo nucifera HOM05D003692 ORTHO05D004295 2.5e-13 79.7 61 63.9
BcaB04g18532 Brassica carinata HOM05D003692 ORTHO05D004295 4.2e-13 79.0 82 48.8
Zm00001eb211620 Zea mays HOM05D003692 ORTHO05D004295 9.4e-13 77.8 61 60.7
THA.LOC104806556 Tarenaya hassleriana HOM05D003692 ORTHO05D004295 1.5e-10 70.5 92 42.4
ATR0697G190 Amborella trichopoda HOM05D003692 ORTHO05D004295 5.7e-10 68.6 61 55.7
Oeu010100.1 Olea europaea HOM05D003692 ORTHO05D004295 1.4e-08 63.9 63 44.4
SHI12711 Sapria himalayana HOM05D003692 ORTHO05D000023 7.0e-08 61.6 70 41.4


User provided reference genes

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