Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p36270 Brassica napus HOM05D000003 ORTHO05D000283 1.8e-59 232.3 109 100.0
BolC9t55462H Brassica oleracea HOM05D000003 ORTHO05D000283 9.7e-37 156.8 74 95.9
BolC2t12400H Brassica oleracea HOM05D000003 ORTHO05D000283 2.7e-10 68.9 78 41.0
BolC3t16330H Brassica oleracea HOM05D000003 ORTHO05D000283 7.8e-10 67.4 156 28.2
BcaC03g14082 Brassica carinata HOM05D000003 ORTHO05D000283 1.9e-08 62.8 47 48.9
BraA02t06658Z Brassica rapa HOM05D000003 ORTHO05D000283 1.9e-08 62.8 156 25.6
AL2G38250 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 2.5e-08 62.4 155 26.5
BcaC05g27859 Brassica carinata HOM05D000003 ORTHO05D000283 4.3e-08 61.6 47 48.9
BolC5t32594H Brassica oleracea HOM05D000003 ORTHO05D000283 4.3e-08 61.6 47 48.9
BcaC01g04544 Brassica carinata HOM05D000003 ORTHO05D000283 1.6e-07 59.7 122 27.9
BcaC05g29952 Brassica carinata HOM05D000003 ORTHO05D000283 2.1e-07 59.3 47 46.8
BolC2t06931H Brassica oleracea HOM05D000003 ORTHO05D000283 2.8e-07 58.9 45 46.7
BcaC06g34297 Brassica carinata HOM05D000003 ORTHO05D000283 3.6e-07 58.5 47 44.7
BcaC08g45146 Brassica carinata HOM05D000003 ORTHO05D000283 6.2e-07 57.8 42 54.8
AL2G10360 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 8.0e-07 57.4 50 44.0
BraA04t16116Z Brassica rapa HOM05D000003 ORTHO05D000283 8.0e-07 57.4 51 47.1
BcaC07g39116 Brassica carinata HOM05D000003 ORTHO05D000283 1.4e-06 56.6 42 52.4
BolC7t40516H Brassica oleracea HOM05D000003 ORTHO05D000283 1.4e-06 56.6 42 54.8
Carub.0003s3092 Capsella rubella HOM05D000003 ORTHO05D000283 1.4e-06 56.6 48 45.8
C06p04470 Brassica napus HOM05D000003 ORTHO05D000283 1.8e-06 56.2 42 42.9
BcaB06g27917 Brassica carinata HOM05D000003 ORTHO05D000283 2.3e-06 55.8 145 25.5
BolC7t41377H Brassica oleracea HOM05D000003 ORTHO05D000283 3.1e-06 55.5 47 44.7
AL4G28120 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 4.0e-06 55.1 156 23.7
BcaC07g38350 Brassica carinata HOM05D000003 ORTHO05D000283 4.0e-06 55.1 47 44.7
AL3G40240 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 5.2e-06 54.7 157 24.2
AT3G25727 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 5.2e-06 54.7 79 32.9
C07p39070 Brassica napus HOM05D000003 ORTHO05D000283 5.2e-06 54.7 47 44.7


User provided reference genes

Program Settings