Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 7.4e-147 523.9 266 100.0
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 7.4e-147 523.9 266 100.0
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 7.7e-144 513.8 269 98.1
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 5.0e-143 511.1 266 97.4
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 1.2e-136 490.0 270 92.6
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 1.2e-133 479.9 271 91.9
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 1.6e-133 479.6 270 90.7
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 2.3e-132 475.7 267 91.8
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 5.2e-132 474.6 267 91.8
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 5.9e-128 461.1 269 88.1
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 1.7e-127 459.5 265 87.9
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 2.9e-127 458.8 268 89.6
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 2.5e-126 455.7 269 88.5
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 9.4e-126 453.8 269 87.0
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 1.6e-112 409.8 273 80.6
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 2.7e-112 409.1 229 92.6
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.3e-103 380.2 268 74.6
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.0e-100 370.5 272 73.9
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 1.9e-89 333.2 268 68.7
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 4.1e-89 332.0 219 79.5
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 5.4e-89 331.6 235 75.3
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 9.2e-89 330.9 235 76.6
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 4.6e-88 328.6 213 81.2
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 7.8e-88 327.8 210 81.0
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 7.8e-88 327.8 268 67.5
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 1.0e-87 327.4 226 76.1
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 1.0e-87 327.4 216 78.2
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 3.0e-87 325.9 278 66.2
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.1e-86 323.9 216 79.2
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 1.9e-86 323.2 234 74.4
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 1.9e-86 323.2 275 66.5
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 2.5e-86 322.8 216 78.2
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 3.3e-86 322.4 268 68.3
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 3.3e-86 322.4 216 78.2
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 3.3e-86 322.4 218 78.4
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 4.3e-86 322.0 217 77.9
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 7.3e-86 321.2 208 79.8
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 2.1e-85 319.7 228 74.1
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 2.8e-85 319.3 276 64.9
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 2.8e-85 319.3 267 65.2
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 3.6e-85 318.9 215 78.1
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 4.7e-85 318.5 201 82.1
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 4.7e-85 318.5 203 80.3
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 6.2e-85 318.2 215 76.3
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 1.4e-84 317.0 201 81.6
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 1.4e-84 317.0 233 71.7
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 2.3e-84 316.2 265 66.0
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.3e-84 316.2 267 66.3
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 3.1e-84 315.8 274 64.6
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 3.1e-84 315.8 238 71.4
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 5.2e-84 315.1 278 63.3
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 5.2e-84 315.1 200 80.0
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 5.2e-84 315.1 218 72.9
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 8.9e-84 314.3 234 70.5
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 8.9e-84 314.3 264 65.9
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 8.9e-84 314.3 220 74.5
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 8.9e-84 314.3 267 65.2
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 1.2e-83 313.9 188 84.0
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.2e-83 313.9 264 65.9
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 1.2e-83 313.9 190 82.6
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.2e-83 313.9 267 65.2
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 1.2e-83 313.9 204 78.4
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 1.2e-83 313.9 243 71.2
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 1.2e-83 313.9 208 77.4
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 1.5e-83 313.5 216 74.5
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 4.4e-83 312.0 198 77.8
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 4.4e-83 312.0 267 63.7
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 7.5e-83 311.2 200 79.5
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 7.5e-83 311.2 267 66.7
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 1.3e-82 310.5 218 74.3
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 1.3e-82 310.5 197 78.7
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 1.7e-82 310.1 217 75.1
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.9e-82 309.3 271 61.6
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 2.9e-82 309.3 273 65.9
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 2.9e-82 309.3 267 63.7
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 3.7e-82 308.9 200 80.0
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 4.9e-82 308.5 226 72.1
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 4.9e-82 308.5 188 81.4
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 6.4e-82 308.1 250 67.6
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 8.3e-82 307.8 275 61.1
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 1.1e-81 307.4 263 65.8
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 1.4e-81 307.0 193 81.3
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 5.4e-81 305.1 266 63.9
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 5.4e-81 305.1 270 64.1
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 5.4e-81 305.1 275 61.8
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 7.1e-81 304.7 196 77.6
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 7.1e-81 304.7 203 76.8
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 7.1e-81 304.7 268 63.4
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 9.2e-81 304.3 204 76.5
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 9.2e-81 304.3 188 81.9
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 3.5e-80 302.4 198 78.3
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 1.3e-79 300.4 198 78.8
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 2.3e-79 299.7 238 68.9
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 3.9e-79 298.9 187 81.3
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 6.6e-79 298.1 195 76.4
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 6.6e-79 298.1 193 76.7
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 6.2e-77 291.6 196 77.6
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 1.1e-76 290.8 187 77.0
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 1.3e-74 283.9 192 75.5
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 5.1e-71 271.9 277 57.0
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 1.2e-69 267.3 222 67.6
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 2.1e-69 266.5 191 68.1
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 2.6e-67 259.6 201 71.6
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 2.4e-65 253.1 192 65.1
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 2.1e-61 240.0 199 59.8
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 9.0e-60 234.6 197 57.4
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 1.0e-55 221.1 203 63.1
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 4.8e-53 212.2 204 61.8
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 8.1e-53 211.5 135 80.7
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 4.5e-51 205.7 271 48.0
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 5.6e-46 188.7 193 51.3
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 1.8e-44 183.7 184 50.0
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 9.0e-44 181.4 108 81.5
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 2.0e-43 180.3 129 71.3
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 3.4e-43 179.5 182 54.9
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 5.3e-36 155.6 108 64.8
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 2.5e-33 146.7 188 41.5
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 8.2e-29 131.7 117 66.7
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.4e-23 114.4 84 66.7
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 8.8e-23 111.7 73 80.8
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 5.9e-19 99.0 95 62.1
BcaB01g05146 Brassica carinata HOM05D039718 ORTHO05D031954 2.9e-18 96.7 103 55.3
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 8.8e-15 85.1 48 81.2
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 4.8e-13 79.3 46 87.0
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 2.4e-12 77.0 67 64.2
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 4.4e-06 56.2 44 59.1


User provided reference genes

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