Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 1.1e-281 972.6 475 100.0
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 1.1e-281 972.6 475 100.0
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 2.7e-277 958.0 475 98.1
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 5.2e-276 953.7 475 97.7
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 1.5e-267 925.6 475 94.3
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 3.4e-267 924.5 475 93.9
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 5.7e-267 923.7 479 94.2
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 3.1e-265 917.9 479 93.5
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 1.2e-264 916.0 475 93.7
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 2.7e-264 914.8 479 93.5
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 4.5e-264 914.1 479 93.3
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 1.7e-263 912.1 499 89.8
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 6.1e-261 903.7 481 92.7
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 3.0e-260 901.4 479 92.1
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 5.2e-260 900.6 486 92.4
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 2.1e-253 878.6 479 88.5
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 8.3e-250 866.7 499 86.8
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 6.6e-231 803.9 479 81.2
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 3.5e-224 781.6 411 92.7
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 2.2e-218 762.3 491 73.3
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 9.3e-217 756.9 475 75.2
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 1.2e-216 756.5 491 72.7
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 3.5e-216 755.0 484 74.6
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 3.5e-216 755.0 482 73.2
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 4.6e-216 754.6 486 74.1
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 4.6e-216 754.6 483 72.0
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 6.0e-216 754.2 484 74.6
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 7.9e-216 753.8 478 73.8
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 7.9e-216 753.8 482 72.8
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.0e-215 753.4 478 73.8
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 1.3e-215 753.1 484 73.6
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 3.9e-215 751.5 479 74.3
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 5.1e-215 751.1 484 73.3
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.1e-214 750.0 478 73.4
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 1.1e-214 750.0 487 73.5
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 1.5e-214 749.6 477 72.3
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 1.5e-214 749.6 479 74.3
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.9e-214 749.2 487 72.7
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 3.3e-214 748.4 488 71.9
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 4.3e-214 748.0 484 72.7
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 5.6e-214 747.7 482 72.6
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 9.6e-214 746.9 478 73.0
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 1.6e-213 746.1 478 73.0
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 2.8e-213 745.3 487 72.3
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 2.8e-213 745.3 476 73.3
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.8e-213 744.6 478 73.2
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 4.8e-213 744.6 490 73.9
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 8.1e-213 743.8 495 70.7
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 1.4e-212 743.0 487 72.3
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 1.4e-212 743.0 485 72.2
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 2.4e-212 742.3 479 73.5
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 2.4e-212 742.3 495 70.5
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.4e-212 742.3 484 72.9
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 5.3e-212 741.1 487 72.3
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 5.3e-212 741.1 483 72.9
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 9.0e-212 740.3 480 74.0
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 1.2e-211 740.0 477 74.8
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 4.5e-211 738.0 481 74.0
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 7.6e-211 737.3 480 72.3
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 1.3e-210 736.5 518 67.8
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 3.8e-210 734.9 483 71.4
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 4.9e-210 734.6 486 72.8
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 4.9e-210 734.6 479 73.3
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 6.4e-210 734.2 484 71.7
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 8.4e-210 733.8 476 72.1
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 8.4e-210 733.8 483 71.6
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 1.1e-209 733.4 475 72.4
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.1e-209 733.4 478 72.0
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.1e-209 733.4 484 72.7
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 1.1e-209 733.4 479 72.0
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 1.9e-209 732.6 483 71.4
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 1.9e-209 732.6 509 69.5
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 2.4e-209 732.3 491 70.1
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 4.2e-209 731.5 484 72.7
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 5.5e-209 731.1 484 72.1
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 2.1e-208 729.2 485 70.9
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 2.1e-208 729.2 480 71.2
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 2.7e-208 728.8 480 72.5
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 4.6e-208 728.0 498 70.9
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 6.0e-208 727.6 480 71.2
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 7.9e-208 727.2 465 72.9
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.8e-207 726.1 475 72.2
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 8.7e-207 723.8 491 69.9
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 5.6e-206 721.1 483 71.2
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 7.4e-206 720.7 473 71.7
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.4e-204 716.5 456 75.0
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 1.8e-204 716.1 485 69.5
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 3.1e-204 715.3 488 70.5
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 5.8e-203 711.1 467 72.4
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 1.0e-202 710.3 488 69.5
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 1.4e-201 706.4 574 61.5
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 2.7e-200 702.2 479 70.4
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 4.6e-200 701.4 491 67.4
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 4.6e-200 701.4 572 61.4
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 1.3e-199 699.9 478 69.0
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 6.7e-199 697.6 482 68.7
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 1.3e-197 693.3 487 69.0
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 3.4e-195 685.3 559 61.4
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 3.6e-192 675.2 540 62.2
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 7.4e-190 667.5 475 65.9
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 1.1e-188 663.7 568 59.7
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 3.1e-188 662.1 411 75.2
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 2.6e-187 659.1 478 66.3
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 2.2e-186 656.0 411 75.9
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 8.5e-186 654.1 593 57.2
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 4.1e-180 635.2 361 88.1
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 1.2e-176 623.6 333 92.5
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 3.6e-176 622.1 325 93.5
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 1.5e-174 616.7 480 61.2
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 1.3e-173 613.6 443 66.1
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 2.6e-171 605.9 422 67.8
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 7.0e-164 581.3 374 73.0
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 6.5e-162 574.7 480 56.9
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 2.5e-161 572.8 493 56.0
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 3.2e-161 572.4 361 76.7
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 2.1e-160 569.7 373 71.0
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 2.7e-160 569.3 327 87.8
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 1.2e-158 563.9 373 70.5
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 9.5e-153 544.3 342 74.3
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 4.0e-151 538.9 327 79.2
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.0e-151 538.9 327 77.4
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.6e-147 526.9 327 76.1
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 2.5e-145 519.6 481 54.1
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 6.4e-141 505.0 328 74.7
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 6.6e-130 468.4 351 66.1
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 8.6e-130 468.0 296 74.3
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 3.5e-99 366.3 442 43.7
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.9e-97 360.5 222 76.1
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 3.1e-95 353.2 387 47.0
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.8e-87 327.4 210 73.3
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 5.3e-87 325.9 426 42.7
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 5.1e-82 309.3 223 61.9
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 7.9e-75 285.4 186 72.6
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.3e-73 279.6 159 82.4
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.3e-73 279.6 159 82.4
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.0e-70 270.8 159 81.1
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 5.1e-66 256.1 145 77.9
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 2.4e-55 220.7 406 33.7
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 3.8e-45 186.8 119 79.0
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.4e-42 178.3 106 79.2
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.0e-42 176.8 94 87.2
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 8.8e-42 175.6 93 88.2
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.7e-41 172.9 106 80.2
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 5.0e-37 159.8 134 56.0
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.3e-29 135.2 91 70.3
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 4.4e-17 93.6 67 58.2
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 7.5e-17 92.8 87 51.7
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 6.4e-16 89.7 70 62.9
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 8.3e-16 89.4 76 60.5
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.4e-15 88.6 65 60.0
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 7.0e-15 86.3 69 63.8
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 1.1e-07 62.4 130 33.8
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 3.5e-06 57.4 34 70.6


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