Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p34950 Brassica napus HOM05D010264 ORTHO05D012423 2.2e-45 185.3 94 100.0
A06p42380 Brassica napus HOM05D010264 ORTHO05D012423 3.6e-40 167.9 94 91.5
BraA06t27153Z Brassica rapa HOM05D010264 ORTHO05D012423 3.6e-40 167.9 94 91.5
BcaC06g33940 Brassica carinata HOM05D010264 ORTHO05D012423 8.4e-37 156.8 81 98.8
BolC7t44027H Brassica oleracea HOM05D010264 ORTHO05D012423 8.4e-37 156.8 81 98.8
BcaC06g31105 Brassica carinata HOM05D010264 ORTHO05D012423 5.6e-25 117.5 81 75.3
Thhalv10005195m.g Eutrema salsugineum HOM05D010264 ORTHO05D012423 1.6e-24 115.9 94 66.0
A02p34160 Brassica napus HOM05D010264 ORTHO05D012423 1.5e-22 109.4 94 63.8
BraA02t08431Z Brassica rapa HOM05D010264 ORTHO05D012423 1.5e-22 109.4 94 63.8
BolC9t56061H Brassica oleracea HOM05D010264 ORTHO05D012423 3.4e-22 108.2 94 61.7
BolC2t11328H Brassica oleracea HOM05D010264 ORTHO05D012423 2.2e-21 105.5 94 61.7
BcaB07g30248 Brassica carinata HOM05D010264 ORTHO05D012423 1.9e-20 102.4 95 62.1
C02p52520 Brassica napus HOM05D010264 ORTHO05D012423 4.2e-20 101.3 94 59.6
AL5G14560 Arabidopsis lyrata HOM05D010264 ORTHO05D012423 1.6e-19 99.4 97 62.9
AT3G25905 Arabidopsis thaliana HOM05D010264 ORTHO05D012423 8.7e-18 93.6 98 59.2
CARHR146890 Cardamine hirsuta HOM05D010264 ORTHO05D012423 1.1e-17 93.2 97 59.8
BcaC04g21412 Brassica carinata HOM05D010264 ORTHO05D012423 2.2e-16 89.0 81 60.5
BcaC03g17305 Brassica carinata HOM05D010264 ORTHO05D012423 6.9e-15 84.0 81 59.3
Carub.0005s0374 Capsella rubella HOM05D010264 ORTHO05D012423 3.4e-14 81.6 99 57.6
C09p32100 Brassica napus HOM05D010264 ORTHO05D012423 1.2e-11 73.2 60 63.3
Aa31LG2G6430 Aethionema arabicum HOM05D010264 ORTHO05D012423 6.7e-10 67.4 65 53.8
THA.LOC109117083 Tarenaya hassleriana HOM05D010264 ORTHO05D012423 1.8e-07 59.3 100 44.0


User provided reference genes

Program Settings