Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33984 Brassica carinata HOM05D009773 ORTHO05D011937 2.4e-52 208.4 94 100.0
C07p34330 Brassica napus HOM05D009773 ORTHO05D011937 2.4e-52 208.4 94 100.0
A06p42760 Brassica napus HOM05D009773 ORTHO05D011937 2.4e-47 191.8 94 93.6
BraA06t27189Z Brassica rapa HOM05D009773 ORTHO05D011937 2.4e-47 191.8 94 93.6
BcaC06g33985 Brassica carinata HOM05D009773 ORTHO05D011937 3.2e-44 181.4 94 88.3
C07p34320 Brassica napus HOM05D009773 ORTHO05D011937 3.2e-44 181.4 94 88.3
A06p42770 Brassica napus HOM05D009773 ORTHO05D011937 6.0e-43 177.2 94 87.2
BcaC06g31136 Brassica carinata HOM05D009773 ORTHO05D011937 1.1e-41 172.9 94 84.0
Aa31LG2G6830 Aethionema arabicum HOM05D009773 ORTHO05D011937 1.8e-23 112.5 98 56.1
CARHR146400 Cardamine hirsuta HOM05D009773 ORTHO05D011937 2.5e-20 102.1 77 59.7
Thhalv10005505m.g Eutrema salsugineum HOM05D009773 ORTHO05D011937 4.2e-20 101.3 95 56.8
Thhalv10005382m.g Eutrema salsugineum HOM05D009773 ORTHO05D011937 1.2e-19 99.8 95 54.7
AL5G13860 Arabidopsis lyrata HOM05D009773 ORTHO05D011937 2.1e-19 99.0 93 47.3
Thhalv10005390m.g Eutrema salsugineum HOM05D009773 ORTHO05D011937 3.5e-19 98.2 95 55.8
AT2G04925 Arabidopsis thaliana HOM05D009773 ORTHO05D011937 6.0e-19 97.4 94 45.7
Thhalv10005341m.g Eutrema salsugineum HOM05D009773 ORTHO05D011937 7.9e-19 97.1 95 53.7
BcaC03g17262 Brassica carinata HOM05D009773 ORTHO05D011937 3.9e-18 94.7 95 48.4
A02p33790 Brassica napus HOM05D009773 ORTHO05D011937 3.9e-18 94.7 95 48.4
C02p51990 Brassica napus HOM05D009773 ORTHO05D011937 3.9e-18 94.7 95 48.4
BolC2t11283H Brassica oleracea HOM05D009773 ORTHO05D011937 3.9e-18 94.7 95 48.4
BraA02t08397Z Brassica rapa HOM05D009773 ORTHO05D011937 3.9e-18 94.7 95 48.4
Carub.0005s0320 Capsella rubella HOM05D009773 ORTHO05D011937 6.7e-18 94.0 76 53.9
AT2G04034 Arabidopsis thaliana HOM05D009773 ORTHO05D011937 1.9e-17 92.4 93 46.2
AL5G13850 Arabidopsis lyrata HOM05D009773 ORTHO05D011937 7.4e-17 90.5 93 45.2
Sp2g14755 Schrenkiella parvula HOM05D009773 ORTHO05D011937 7.4e-17 90.5 83 53.0
Aa31LG2G6840 Aethionema arabicum HOM05D009773 ORTHO05D011937 6.3e-16 87.4 94 44.7
THA.LOC104805948 Tarenaya hassleriana HOM05D015103 ORTHO05D017408 4.5e-06 54.7 112 34.8


User provided reference genes

Program Settings