Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p33480 Brassica napus HOM05D001070 ORTHO05D005132 6.1e-250 867.1 452 100.0
BolSC35t60686H Brassica oleracea HOM05D001070 ORTHO05D005132 4.1e-246 854.4 451 96.9
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 5.3e-246 854.0 452 96.9
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 5.3e-246 854.0 452 96.9
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 1.0e-244 849.7 449 96.9
BcaB03g16407 Brassica carinata HOM05D001070 ORTHO05D005132 5.0e-220 767.7 452 88.5
C02p28800 Brassica napus HOM05D001070 ORTHO05D005132 1.1e-198 696.8 367 100.0
BolSC29t60512H Brassica oleracea HOM05D001070 ORTHO05D005132 8.6e-196 687.2 366 96.7
C05p53850 Brassica napus HOM05D001070 ORTHO05D005132 2.8e-178 629.0 336 97.6
BolSC37t60799H Brassica oleracea HOM05D001070 ORTHO05D005132 1.1e-129 467.6 257 95.3
BolC2t10603H Brassica oleracea HOM05D001070 ORTHO05D005132 3.3e-123 446.0 243 93.8
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 1.5e-120 437.2 486 53.3
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 9.4e-110 401.4 466 50.0
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.9e-103 379.8 483 47.2
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 1.1e-102 377.9 470 48.7
Nn1g08629 Nelumbo nucifera HOM05D001070 ORTHO05D005132 6.8e-100 368.6 495 46.3
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 4.0e-92 342.8 470 44.7
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 8.9e-92 341.7 450 44.9
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 5.0e-87 325.9 483 42.9
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 2.6e-83 313.5 485 41.9
PSO063G4510 Papaver somniferum HOM05D001070 ORTHO05D005132 8.0e-77 292.0 396 44.2
ClCG11G009240 Citrullus lanatus HOM05D001070 ORTHO05D005132 9.8e-75 285.0 386 45.9
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 3.5e-72 276.6 416 42.8
Migut.D01247 Erythranthe guttata HOM05D001070 ORTHO05D005132 7.8e-72 275.4 388 44.3
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 4.7e-69 266.2 360 44.7
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 2.9e-66 256.9 480 39.2
HanXRQChr09g0258471 Helianthus annuus HOM05D001070 ORTHO05D005132 2.9e-66 256.9 480 39.2
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 2.9e-66 256.9 480 39.2
HanXRQChr15g0465481 Helianthus annuus HOM05D001070 ORTHO05D005132 2.9e-66 256.9 480 39.2
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 2.9e-66 256.9 480 39.2
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 2.9e-66 256.9 480 39.2
HanXRQChr00c0703g0576911 Helianthus annuus HOM05D001070 ORTHO05D005132 9.2e-65 251.9 457 39.8
HanXRQChr03g0087621 Helianthus annuus HOM05D001070 ORTHO05D005132 1.6e-64 251.1 472 39.8
arahy.Tifrunner.gnm1.ann1.B1X1LX Arachis hypogaea HOM05D001070 ORTHO05D005132 1.3e-63 248.1 400 40.0
HanXRQChr13g0413611 Helianthus annuus HOM05D001070 ORTHO05D005132 1.5e-62 244.6 394 42.1
HanXRQChr00c0336g0573711 Helianthus annuus HOM05D001070 ORTHO05D005132 5.2e-60 236.1 452 39.8
Peaxi162Scf00030g02112 Petunia axillaris HOM05D001070 ORTHO05D005132 3.1e-52 210.3 270 48.9
Hund28953 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.0e-47 195.3 482 31.3
Hund08794 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund12717 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund12844 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund23969 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund27677 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund27830 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund27882 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund28329 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund28437 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund28449 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund28598 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund28612 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund28879 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund28938 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund28947 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund28962 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund28978 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29178 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29187 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29245 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29246 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29252 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29274 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29278 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29282 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29286 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29287 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29315 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29440 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29712 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29754 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund29819 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund30035 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund30119 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund30176 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
Hund30366 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-47 194.5 482 31.3
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 6.4e-42 176.0 184 52.2
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 2.4e-41 174.1 448 32.8
Gohir.1Z049494 Gossypium hirsutum HOM05D001070 ORTHO05D005132 2.3e-39 167.5 301 39.2
Gohir.A09G045792 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.9e-38 164.5 222 47.7
Gohir.D11G334275 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.9e-38 164.5 301 38.2
Gohir.A09G039280 Gossypium hirsutum HOM05D001070 ORTHO05D005132 7.4e-38 162.5 304 37.5
Gohir.D11G237240 Gossypium hirsutum HOM05D001070 ORTHO05D005132 6.2e-37 159.5 301 37.2
Gorai.010G136000 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.5e-35 154.8 258 42.2
Gorai.004G219800 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.9e-34 150.6 301 36.2
EL10As1g23055 Beta vulgaris HOM05D001070 ORTHO05D005132 2.8e-29 134.0 262 36.3
MELO3C027053.2 Cucumis melo HOM05D001070 ORTHO05D005132 8.2e-29 132.5 158 48.7
Gohir.D08G133232 Gossypium hirsutum HOM05D001070 ORTHO05D005132 5.3e-28 129.8 247 37.7
Hund28952 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.3e-28 129.8 443 27.3
Gorai.004G136300 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.5e-27 128.3 247 37.7
Gorai.002G047700 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.0e-27 127.9 198 45.5
Glyma.18G155800 Glycine max HOM05D001070 ORTHO05D005132 1.0e-26 125.6 219 39.7
HanXRQChr17g0569771 Helianthus annuus HOM05D001070 ORTHO05D005132 2.2e-26 124.4 235 41.3
Hund28588 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.5e-25 120.9 409 27.4
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.5e-25 120.9 409 27.4
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.5e-25 120.9 409 27.4
Hund29110 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.5e-25 120.9 409 27.4
Hund29253 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.5e-25 120.9 409 27.4
Hund30040 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.5e-25 120.9 409 27.4
Nn3g17667 Nelumbo nucifera HOM05D000388 ORTHO05D000473 7.1e-25 119.4 168 47.0
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-25 119.4 441 27.0
Hund29025 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.3e-25 119.0 408 27.2
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.7e-24 117.5 303 30.7
EL10Ac1g01959 Beta vulgaris HOM05D001070 ORTHO05D005132 3.5e-24 117.1 175 42.9
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 1.8e-23 114.8 174 42.0
RcHm_v2.0_Chr7g0212321 Rosa chinensis HOM05D001070 ORTHO05D005132 3.9e-23 113.6 154 46.1
Solyc11g021240.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 5.1e-23 113.2 98 58.2
Gohir.A02G108504 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.6e-21 108.2 102 57.8
Medtr2g039370 Medicago truncatula HOM05D001070 ORTHO05D005132 3.1e-20 104.0 140 45.0
Medtr8g093760 Medicago truncatula HOM05D001070 ORTHO05D005132 4.1e-20 103.6 232 30.6
Lju5009P0T28 Lonicera japonica HOM05D001070 ORTHO05D005132 1.2e-19 102.1 395 30.4
Medtr6g042180 Medicago truncatula HOM05D001070 ORTHO05D005132 1.2e-19 102.1 92 54.3
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 1.2e-19 102.1 157 42.7
Nitab4.5_0007104g0080 Nicotiana tabacum HOM05D001070 ORTHO05D005132 7.7e-19 99.4 131 45.8
Gorai.006G079500 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.2e-18 97.8 102 53.9
arahy.Tifrunner.gnm1.ann1.1Y8W5R Arachis hypogaea HOM05D001070 ORTHO05D018510 6.5e-18 96.3 88 55.7
Hund28911 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.5e-17 94.4 408 26.5
Peaxi162Scf00080g00527 Petunia axillaris HOM05D001070 ORTHO05D036944 4.2e-17 93.6 146 40.4
Gohir.A13G086425 Gossypium hirsutum HOM05D001070 ORTHO05D005132 5.5e-17 93.2 114 45.6
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.2e-16 92.0 156 35.3
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.8e-15 88.2 147 36.7
GSVIVG01019173001 Vitis vinifera HOM05D000216 ORTHO05D000634 2.3e-15 87.8 115 47.0
SEGI_27427 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 8.8e-15 85.9 227 32.2
SEGI_20187 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 2.0e-14 84.7 227 31.7
SEGI_30878 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 2.0e-14 84.7 227 31.7
SEGI_36485 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 2.0e-14 84.7 227 31.7
SEGI_38135 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 2.2e-13 81.3 216 32.4
SEGI_01987 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 4.8e-13 80.1 227 30.8
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 1.4e-12 78.6 92 51.1
arahy.Tifrunner.gnm1.ann1.LH3NEH Arachis hypogaea HOM05D001070 ORTHO05D005132 2.4e-12 77.8 289 28.7
Gohir.D09G079833 Gossypium hirsutum HOM05D001070 ORTHO05D005132 9.1e-12 75.9 68 54.4
Solyc07g041680.2 Solanum lycopersicum HOM05D001070 ORTHO05D005132 9.1e-12 75.9 107 43.0
arahy.Tifrunner.gnm1.ann1.IUHB90 Arachis hypogaea HOM05D001070 ORTHO05D005132 5.9e-11 73.2 93 44.1
Medtr7g104140 Medicago truncatula HOM05D001070 ORTHO05D005132 1.3e-10 72.0 72 51.4
BolC7t43860H Brassica oleracea HOM05D001070 ORTHO05D005132 2.2e-10 71.2 34 97.1
Medtr1g051590 Medicago truncatula HOM05D000533 ORTHO05D001069 5.5e-09 66.6 156 34.6
Gorai.011G078900 Gossypium raimondii HOM05D001070 ORTHO05D005132 9.4e-09 65.9 89 44.9
CARHR180460 Cardamine hirsuta HOM05D001070 ORTHO05D005132 1.2e-08 65.5 62 58.1
Gorai.012G102100 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.7e-08 64.3 97 39.2
Hund28853 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-08 63.9 166 30.7
Nn029s41576 Nelumbo nucifera HOM05D001070 ORTHO05D005132 6.1e-08 63.2 81 45.7
Hund20483 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.0e-06 58.2 75 48.0
Lj2P1238T100 Lonicera japonica HOM05D001070 ORTHO05D005132 2.6e-06 57.8 130 32.3


User provided reference genes

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