Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p32840 Brassica napus HOM05D000290 ORTHO05D027172 4.2e-133 478.0 242 100.0
BolC7t43798H Brassica oleracea HOM05D000290 ORTHO05D027172 2.1e-132 475.7 242 99.6
BcaC06g34088 Brassica carinata HOM05D000290 ORTHO05D027172 3.4e-74 282.3 235 69.8
Sp6g37630 Schrenkiella parvula HOM05D000290 ORTHO05D007356 2.7e-31 139.8 220 45.9
CARHR208040 Cardamine hirsuta HOM05D000290 ORTHO05D007356 6.1e-31 138.7 220 45.5
BcaC06g32229 Brassica carinata HOM05D000290 ORTHO05D007356 1.8e-30 137.1 220 45.5
C09p71500 Brassica napus HOM05D000290 ORTHO05D007356 1.8e-30 137.1 220 45.5
BolC9t59913H Brassica oleracea HOM05D000290 ORTHO05D007356 1.8e-30 137.1 220 45.5
Thhalv10013198m.g Eutrema salsugineum HOM05D000290 ORTHO05D007356 2.3e-30 136.7 220 45.0
BcaB01g05718 Brassica carinata HOM05D000290 ORTHO05D007356 6.7e-30 135.2 220 45.0
A03p02240 Brassica napus HOM05D000290 ORTHO05D007356 6.7e-30 135.2 220 45.0
BraA03t09588Z Brassica rapa HOM05D000290 ORTHO05D007356 6.7e-30 135.2 220 45.0
Aa31LG11G6040 Aethionema arabicum HOM05D000290 ORTHO05D007356 8.8e-30 134.8 222 45.5
BcaB01g05943 Brassica carinata HOM05D000290 ORTHO05D007356 8.8e-30 134.8 220 45.5
A10p30990 Brassica napus HOM05D000290 ORTHO05D007356 1.1e-29 134.4 220 45.0
AUR62030591 Chenopodium quinoa HOM05D000290 ORTHO05D007356 1.1e-29 134.4 250 41.6
BraA10t45144Z Brassica rapa HOM05D000290 ORTHO05D007356 2.0e-29 133.7 220 44.5
AUR62024948 Chenopodium quinoa HOM05D000290 ORTHO05D007356 4.4e-29 132.5 216 45.4
Carub.0006s0413 Capsella rubella HOM05D000290 ORTHO05D007356 1.3e-28 131.0 220 44.1
AT5G05200 Arabidopsis thaliana HOM05D000290 ORTHO05D007356 1.7e-28 130.6 216 44.9
C03p02580 Brassica napus HOM05D000290 ORTHO05D007356 2.2e-28 130.2 220 44.5
AL6G15040 Arabidopsis lyrata HOM05D000290 ORTHO05D007356 2.8e-28 129.8 216 44.4
Ah.12g064460 Amaranthus hybridus HOM05D000290 ORTHO05D007356 4.1e-27 125.9 216 43.1
Phvul.008G186400 Phaseolus vulgaris HOM05D000290 ORTHO05D007356 1.6e-26 124.0 221 43.0
PGR142G4431 Punica granatum HOM05D000290 ORTHO05D007356 1.6e-26 124.0 219 42.9
Eucgr.G03148 Eucalyptus grandis HOM05D000290 ORTHO05D007356 2.7e-26 123.2 221 43.4
EL10Ac2g02669 Beta vulgaris HOM05D000290 ORTHO05D007356 3.5e-26 122.9 247 40.1
arahy.Tifrunner.gnm1.ann1.FMIL5U Arachis hypogaea HOM05D000290 ORTHO05D007356 4.5e-26 122.5 221 43.9
arahy.Tifrunner.gnm1.ann1.S15XUX Arachis hypogaea HOM05D000290 ORTHO05D007356 4.5e-26 122.5 221 43.9
Cfa001193 Carpinus fangiana HOM05D000290 ORTHO05D007356 4.5e-26 122.5 215 41.4
LjContig00408g0018075 Lotus japonicus HOM05D000290 ORTHO05D007356 4.5e-26 122.5 216 42.1
THA.LOC104823168 Tarenaya hassleriana HOM05D000290 ORTHO05D007356 5.9e-26 122.1 220 41.8
GSVIVG01032656001 Vitis vinifera HOM05D000290 ORTHO05D007356 7.7e-26 121.7 219 42.0
CANSAT56G2455 Cannabis sativa HOM05D000290 ORTHO05D007356 1.3e-25 120.9 208 44.7
Peaxi162Scf00073g02224 Petunia axillaris HOM05D000290 ORTHO05D007356 1.7e-25 120.6 222 42.3
MD07G1235400 Malus domestica HOM05D000290 ORTHO05D007356 2.2e-25 120.2 222 41.4
Haze_17371 Corylus avellana HOM05D000290 ORTHO05D007356 2.9e-25 119.8 215 40.9
CiPaw.01G307500 Carya illinoinensis HOM05D000290 ORTHO05D007356 5.0e-25 119.0 219 41.6
COL.COLO4_19476 Corchorus olitorius HOM05D000290 ORTHO05D007356 5.0e-25 119.0 219 40.2
Dinv34498 Davidia involucrata HOM05D000290 ORTHO05D007356 5.0e-25 119.0 215 41.4
Atru.chr12.193 Acer truncatum HOM05D000290 ORTHO05D007356 8.5e-25 118.2 215 41.4
Lalb_Chr10g0102831 Lupinus albus HOM05D000290 ORTHO05D007356 8.5e-25 118.2 203 43.8
Hma1.2p1_1805F.1_g303140 Hydrangea macrophylla HOM05D000290 ORTHO05D007356 1.1e-24 117.9 220 41.4
Manes.07G142100 Manihot esculenta HOM05D000290 ORTHO05D007356 1.1e-24 117.9 215 40.9
PGSC0003DMG400022947 Solanum tuberosum HOM05D000290 ORTHO05D007356 1.1e-24 117.9 222 41.9
PSO170G6016 Papaver somniferum HOM05D000290 ORTHO05D007356 1.5e-24 117.5 221 41.6
Solyc03g095620.4 Solanum lycopersicum HOM05D000290 ORTHO05D007356 1.5e-24 117.5 222 41.4
Ciclev10031187m.g Citrus clementina HOM05D000290 ORTHO05D007356 1.9e-24 117.1 221 40.7
Nitab4.5_0000171g0290 Nicotiana tabacum HOM05D000290 ORTHO05D007356 1.9e-24 117.1 220 41.4
CSS0016279 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007356 2.5e-24 116.7 217 41.9
CSS0037983 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007356 2.5e-24 116.7 217 41.9
ATR1127G020 Amborella trichopoda HOM05D000290 ORTHO05D007356 3.2e-24 116.3 222 41.4
TWI09G1541 Tripterygium wilfordii HOM05D000290 ORTHO05D007356 3.2e-24 116.3 206 43.7
Ca_23242_v3 Cicer arietinum L. HOM05D000290 ORTHO05D007356 4.2e-24 115.9 221 41.6
PSO017G3158 Papaver somniferum HOM05D000290 ORTHO05D007356 4.2e-24 115.9 207 43.0
Sopen03g025570 Solanum pennellii HOM05D000290 ORTHO05D007356 4.2e-24 115.9 222 41.0
Glyma.14G186700 Glycine max HOM05D000290 ORTHO05D007356 5.5e-24 115.5 221 42.1
Thecc.10G185100 Theobroma cacao HOM05D000290 ORTHO05D007356 5.5e-24 115.5 215 39.5
TAR623G1031 Trochodendron aralioides HOM05D000290 ORTHO05D007356 5.5e-24 115.5 202 43.1
HPP92_017912 Vanilla planifolia HOM05D000290 ORTHO05D007356 7.2e-24 115.2 211 43.6
Cpa.g.sc19.40 Carica papaya HOM05D000290 ORTHO05D007356 1.6e-23 114.0 208 43.3
Duzib114G0405 Durio zibethinus HOM05D000290 ORTHO05D007356 1.6e-23 114.0 215 39.5
SEGI_22277 Sequoiadendron giganteum HOM05D000290 ORTHO05D007356 1.6e-23 114.0 209 41.1
TPR.G33928 Trifolium pratense HOM05D000290 ORTHO05D007356 1.6e-23 114.0 215 40.5
CAN.G1229.6 Capsicum annuum HOM05D000290 ORTHO05D007356 2.1e-23 113.6 208 42.8
FvH4_7g26150 Fragaria vesca HOM05D000290 ORTHO05D007356 2.1e-23 113.6 222 40.5
FAN06G0462 Fragaria x ananassa HOM05D000290 ORTHO05D007356 2.1e-23 113.6 222 40.5
FAN10G3915 Fragaria x ananassa HOM05D000290 ORTHO05D007356 2.1e-23 113.6 222 40.1
Rhsim03G0153700 Rhododendron simsii HOM05D000290 ORTHO05D007356 2.1e-23 113.6 219 41.1
Sc10g0003060 Simmondsia chinensis HOM05D000290 ORTHO05D007356 2.1e-23 113.6 215 40.5
Migut.F01231 Erythranthe guttata HOM05D000290 ORTHO05D007356 2.7e-23 113.2 220 42.3
vmacro06903 Vaccinium macrocarpon HOM05D000290 ORTHO05D007356 2.7e-23 113.2 221 40.3
Oeu039386.1 Olea europaea HOM05D000290 ORTHO05D007356 3.6e-23 112.8 215 40.9
Os07g0227800 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D007356 3.6e-23 112.8 216 39.8
Aqoxy4G03280 Aquilegia oxysepala HOM05D000290 ORTHO05D007356 4.7e-23 112.5 201 41.8
Cc02_g05200 Coffea canephora HOM05D000290 ORTHO05D007356 4.7e-23 112.5 216 40.3
Prupe.2G265700 Prunus persica HOM05D000290 ORTHO05D007356 4.7e-23 112.5 215 40.0
Lj8A52T21 Lonicera japonica HOM05D000290 ORTHO05D007356 6.1e-23 112.1 221 40.7
ECA238G2935 Erigeron canadensis HOM05D000290 ORTHO05D007356 8.0e-23 111.7 200 43.0
FAN01G0461 Fragaria x ananassa HOM05D000290 ORTHO05D007356 8.0e-23 111.7 222 40.1
Medtr5g068050 Medicago truncatula HOM05D000290 ORTHO05D007356 8.0e-23 111.7 215 40.0
Psat2g061840 Pisum sativum HOM05D000290 ORTHO05D007356 1.0e-22 111.3 215 40.0
Gohir.A05G404300 Gossypium hirsutum HOM05D000290 ORTHO05D007356 1.4e-22 110.9 214 38.8
Gohir.D04G011400 Gossypium hirsutum HOM05D000290 ORTHO05D007356 1.4e-22 110.9 214 38.8
Gorai.012G013600 Gossypium raimondii HOM05D000290 ORTHO05D007356 1.4e-22 110.9 214 38.8
Potri.019G061300 Populus trichocarpa HOM05D000290 ORTHO05D007356 2.3e-22 110.2 215 40.0
QL08p065093 Quercus lobata HOM05D000290 ORTHO05D007356 2.3e-22 110.2 205 42.0
Zm00001eb303700 Zea mays HOM05D000290 ORTHO05D007356 3.0e-22 109.8 201 40.8
Hund13437 Selenicereus undatus HOM05D000290 ORTHO05D007356 4.0e-22 109.4 201 38.8
unitig_90.g27551 Utricularia gibba HOM05D000290 ORTHO05D007356 4.0e-22 109.4 206 42.2
Sed0001960 Sechium edule HOM05D000290 ORTHO05D007356 8.8e-22 108.2 219 38.8
MELO3C020171.2 Cucumis melo HOM05D000290 ORTHO05D007356 1.2e-21 107.8 219 39.3
SGA_v2.0_scaffold160G37737 Striga asiatica HOM05D000290 ORTHO05D007356 1.2e-21 107.8 220 41.4
ClCG07G005270 Citrullus lanatus HOM05D000290 ORTHO05D007356 1.5e-21 107.5 219 38.8
RcHm_v2.0_Chr1g0372581 Rosa chinensis HOM05D000290 ORTHO05D007356 2.0e-21 107.1 215 38.1
MD01G1169500 Malus domestica HOM05D000290 ORTHO05D007356 2.6e-21 106.7 208 40.9
CsaV3_5G011120 Cucumis sativus L. HOM05D000290 ORTHO05D007356 4.4e-21 105.9 219 38.8
HanXRQChr14g0460511 Helianthus annuus HOM05D000290 ORTHO05D007356 7.5e-21 105.1 200 41.5
Lsat_1_v5_gn_2_126721 Lactuca sativa HOM05D000290 ORTHO05D007356 2.0e-18 97.1 200 39.5
Sabra19G0075100 Salix brachista HOM05D000290 ORTHO05D007356 7.7e-18 95.1 253 34.8
BolC3t12810H Brassica oleracea HOM05D000290 ORTHO05D007356 7.2e-16 88.6 176 41.5
AagrBONN_evm.TU.Sc2ySwM_344.3768 Anthoceros agrestis HOM05D000290 ORTHO05D007356 9.4e-16 88.2 209 34.9
CBR_g39924 Chara braunii HOM05D000290 ORTHO05D007356 2.3e-14 83.6 225 32.9
BraA08t33020Z Brassica rapa HOM05D000290 ORTHO05D027172 4.0e-14 82.8 57 75.4
Pp3c1_33470 Physcomitrium patens HOM05D000290 ORTHO05D007356 5.7e-13 79.0 211 32.7
Nitab4.5_0005979g0040 Nicotiana tabacum HOM05D000290 ORTHO05D007356 9.8e-13 78.2 130 42.3
SalBow2G1855 Salvia bowleyana HOM05D000290 ORTHO05D007356 1.3e-12 77.8 130 42.3
BraA07t31299Z Brassica rapa HOM05D004709 ORTHO05D005669 2.2e-12 77.0 44 84.1
C05p13780 Brassica napus HOM05D010157 ORTHO05D101104 1.1e-11 74.7 44 79.5
Duzib128G1704 Durio zibethinus HOM05D000290 ORTHO05D007356 1.4e-11 74.3 104 46.2
Mapoly0021s0153 Marchantia polymorpha HOM05D000290 ORTHO05D007356 4.1e-11 72.8 210 32.4
SMO361G0050 Selaginella moellendorffii HOM05D000290 ORTHO05D007356 2.0e-10 70.5 197 32.0
C09p14180 Brassica napus HOM05D024713 ORTHO05D000065 7.7e-10 68.6 58 62.1
Actinidia01008 Actinidia chinensis HOM05D000290 ORTHO05D007356 1.0e-09 68.2 101 46.5
BcaC08g46389 Brassica carinata HOM05D012065 ORTHO05D014121 9.5e-08 61.6 45 62.2
MCO04G093 Micromonas commoda HOM05D000290 ORTHO05D007356 1.2e-07 61.2 117 35.9
BolC1t03884H Brassica oleracea HOM05D010157 ORTHO05D017615 2.8e-07 60.1 45 62.2
CDE04G3545 Ceratophyllum demersum HOM05D000290 ORTHO05D007356 6.1e-07 58.9 119 38.7
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 6.1e-07 58.9 50 62.0
Nn2g10265 Nelumbo nucifera HOM05D000290 ORTHO05D007356 1.4e-06 57.8 56 55.4
A03p62560 Brassica napus HOM05D010157 ORTHO05D017615 8.9e-06 55.1 45 55.6
BolC5t32497H Brassica oleracea HOM05D010157 ORTHO05D017615 8.9e-06 55.1 45 62.2
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 8.9e-06 55.1 44 59.1


User provided reference genes

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