Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p32420 Brassica napus HOM05D009574 ORTHO05D015401 2.3e-56 221.9 100 100.0
BolC9t57730H Brassica oleracea HOM05D009574 ORTHO05D015401 1.5e-55 219.2 100 98.0
BolC5t33123H Brassica oleracea HOM05D000353 ORTHO05D015401 3.6e-30 134.8 270 34.1
C02p33390 Brassica napus HOM05D000353 ORTHO05D015401 8.1e-30 133.7 269 33.8
C09p48830 Brassica napus HOM05D011161 ORTHO05D026813 6.6e-24 114.0 52 98.1
A01p37990 Brassica napus HOM05D000353 ORTHO05D015401 1.1e-18 96.7 46 93.5
BcaB01g05982 Brassica carinata HOM05D000353 ORTHO05D000174 3.5e-17 91.7 46 87.0
BcaB07g32743 Brassica carinata HOM05D000353 ORTHO05D000174 1.8e-16 89.4 46 84.8
BcaC01g00855 Brassica carinata HOM05D011161 ORTHO05D015401 7.4e-15 84.0 39 89.7
BcaC04g20239 Brassica carinata HOM05D011161 ORTHO05D015401 2.1e-14 82.4 40 92.5
BcaB01g05981 Brassica carinata HOM05D009574 ORTHO05D012637 2.8e-14 82.0 44 70.5
C07p16110 Brassica napus HOM05D009574 ORTHO05D012637 2.8e-14 82.0 44 70.5
AT5G28885 Arabidopsis thaliana HOM05D009574 ORTHO05D015401 2.9e-11 72.0 64 54.7
AL5G11810 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.2e-10 68.6 46 58.7
AT2G05642 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 4.2e-10 68.2 46 58.7
BcaC05g25301 Brassica carinata HOM05D011161 ORTHO05D012637 2.7e-09 65.5 36 72.2
BolC5t29929H Brassica oleracea HOM05D011161 ORTHO05D012637 2.7e-09 65.5 36 72.2
BcaB07g32682 Brassica carinata HOM05D009574 ORTHO05D012637 7.9e-09 63.9 45 55.6
C05p29470 Brassica napus HOM05D009574 ORTHO05D000174 7.9e-09 63.9 45 55.6
BolC5t31677H Brassica oleracea HOM05D009574 ORTHO05D000174 7.9e-09 63.9 45 55.6
BcaC03g15564 Brassica carinata HOM05D009574 ORTHO05D000174 1.3e-08 63.2 37 59.5
BolC2t09283H Brassica oleracea HOM05D009574 ORTHO05D000174 1.3e-08 63.2 37 59.5
C07p39810 Brassica napus HOM05D009574 ORTHO05D000174 5.1e-08 61.2 192 25.0
BcaC01g01009 Brassica carinata HOM05D009574 ORTHO05D012637 8.7e-08 60.5 36 58.3
C03p87220 Brassica napus HOM05D009574 ORTHO05D012637 8.7e-08 60.5 36 58.3
AL1G48730 Arabidopsis lyrata HOM05D000353 ORTHO05D031316 1.5e-07 59.7 44 56.8
AL4G27470 Arabidopsis lyrata HOM05D006838 ORTHO05D008915 1.5e-07 59.7 44 56.8
BcaNung02594 Brassica carinata HOM05D009574 ORTHO05D012637 1.3e-06 56.6 35 57.1
AL7G20110 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.2e-06 54.3 47 55.3


User provided reference genes

Program Settings