Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p31290 Brassica napus HOM05D008086 ORTHO05D004972 7.7e-149 530.4 258 100.0
BcaC06g34235 Brassica carinata HOM05D008086 ORTHO05D004972 1.8e-145 519.2 259 98.1
BcaC06g34237 Brassica carinata HOM05D008086 ORTHO05D004972 1.7e-143 512.7 283 90.1
BolC7t43666H Brassica oleracea HOM05D008086 ORTHO05D004972 2.1e-130 469.2 261 88.5
C07p31250 Brassica napus HOM05D008086 ORTHO05D004972 7.5e-128 460.7 261 87.7
A06p44930 Brassica napus HOM05D008086 ORTHO05D004972 1.3e-127 459.9 262 88.5
BraA06t27364Z Brassica rapa HOM05D008086 ORTHO05D004972 1.3e-127 459.9 262 88.5
BcaC06g31364 Brassica carinata HOM05D008086 ORTHO05D004972 2.2e-124 449.1 254 86.6
BcaC06g31356 Brassica carinata HOM05D008086 ORTHO05D004972 1.1e-118 430.3 286 76.9
BraA06t27366Z Brassica rapa HOM05D008086 ORTHO05D004972 2.1e-93 346.3 250 68.4
BcaC06g31366 Brassica carinata HOM05D008086 ORTHO05D004972 3.5e-93 345.5 242 70.2
A06p44950 Brassica napus HOM05D008086 ORTHO05D004972 6.2e-90 334.7 238 70.2
C07p31230 Brassica napus HOM05D008086 ORTHO05D004972 8.9e-89 330.9 251 66.1
BolC7t43664H Brassica oleracea HOM05D008086 ORTHO05D004972 1.3e-87 327.0 251 65.3
AL8G10360 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 4.1e-86 322.0 253 66.8
Carub.0008s0020 Capsella rubella HOM05D008086 ORTHO05D004972 9.2e-86 320.9 247 68.4
AL8G10380 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 5.1e-84 315.1 243 67.1
CARHR173760 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.1e-83 313.9 256 62.9
Thhalv10001213m.g Eutrema salsugineum HOM05D008086 ORTHO05D004972 6.4e-79 298.1 204 70.1
CARHR174690 Cardamine hirsuta HOM05D008086 ORTHO05D004972 5.4e-78 295.0 239 60.7
BcaC04g19776 Brassica carinata HOM05D008086 ORTHO05D004972 2.7e-77 292.7 263 58.9
C09p51830 Brassica napus HOM05D008086 ORTHO05D004972 2.7e-77 292.7 263 58.9
BraA06t27411Z Brassica rapa HOM05D008086 ORTHO05D004972 3.5e-77 292.4 257 59.5
CARHR173730 Cardamine hirsuta HOM05D008086 ORTHO05D004972 2.3e-76 289.7 256 58.2
CARHR183270 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.5e-75 287.0 241 59.3
BolC1t05406H Brassica oleracea HOM05D008086 ORTHO05D004972 6.2e-74 281.6 261 56.3
BcaC03g17198 Brassica carinata HOM05D008086 ORTHO05D004972 1.4e-73 280.4 263 56.7
C02p51250 Brassica napus HOM05D008086 ORTHO05D004972 1.4e-73 280.4 266 56.4
BolC2t11215H Brassica oleracea HOM05D008086 ORTHO05D004972 1.4e-73 280.4 263 56.7
BolC9t58045H Brassica oleracea HOM05D008086 ORTHO05D004972 5.3e-73 278.5 249 59.0
THA.LOC104798375 Tarenaya hassleriana HOM05D008086 ORTHO05D004972 2.6e-72 276.2 249 57.0
A01p41900 Brassica napus HOM05D008086 ORTHO05D004972 3.4e-72 275.8 261 56.7
C07p30570 Brassica napus HOM05D008086 ORTHO05D004972 4.4e-72 275.4 267 55.8
BcaC06g31340 Brassica carinata HOM05D008086 ORTHO05D004972 2.9e-71 272.7 275 53.1
BcaC06g31429 Brassica carinata HOM05D008086 ORTHO05D004972 6.4e-71 271.6 275 53.1
BcaC06g34302 Brassica carinata HOM05D008086 ORTHO05D004972 8.4e-71 271.2 267 55.8
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 3.5e-69 265.8 222 61.7
Aa31LG9G5430 Aethionema arabicum HOM05D008086 ORTHO05D004972 6.0e-69 265.0 231 58.0
A02p30530 Brassica napus HOM05D008086 ORTHO05D004972 6.0e-69 265.0 231 58.4
BcaC03g16869 Brassica carinata HOM05D008086 ORTHO05D004972 1.1e-67 260.8 267 53.6
A06p45430 Brassica napus HOM05D008086 ORTHO05D004972 3.6e-66 255.8 232 59.1
C07p30540 Brassica napus HOM05D008086 ORTHO05D004972 6.9e-65 251.5 208 62.5
BraA02t08071Z Brassica rapa HOM05D008086 ORTHO05D004972 1.2e-64 250.8 242 56.2
BolC2t10802H Brassica oleracea HOM05D008086 ORTHO05D004972 4.9e-63 245.4 243 53.5
CARHR173740 Cardamine hirsuta HOM05D008086 ORTHO05D004972 6.4e-63 245.0 246 54.1
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 9.3e-62 241.1 223 57.0
BraA02t08035Z Brassica rapa HOM05D008086 ORTHO05D004972 1.4e-57 227.3 271 48.0
BraA02t08074Z Brassica rapa HOM05D008086 ORTHO05D004972 5.3e-57 225.3 254 50.0
BcaC03g16909 Brassica carinata HOM05D008086 ORTHO05D004972 3.4e-56 222.6 213 54.5
BolC2t10843H Brassica oleracea HOM05D008086 ORTHO05D004972 1.7e-55 220.3 202 55.0
BcaB07g30809 Brassica carinata HOM05D008086 ORTHO05D004972 2.9e-55 219.5 227 52.4
A02p30570 Brassica napus HOM05D008086 ORTHO05D004972 3.8e-55 219.2 254 48.8
BcaC06g34304 Brassica carinata HOM05D008086 ORTHO05D004972 1.9e-54 216.9 221 53.4
AT5G47590 Arabidopsis thaliana HOM05D008086 ORTHO05D004972 5.5e-54 215.3 140 74.3
C02p47660 Brassica napus HOM05D008086 ORTHO05D004972 4.6e-53 212.2 228 53.1
BcaNung07056 Brassica carinata HOM05D008086 ORTHO05D004972 1.8e-49 200.3 214 52.3
C02p48110 Brassica napus HOM05D008086 ORTHO05D004972 1.0e-47 194.5 187 53.5
BcaC03g16910 Brassica carinata HOM05D008086 ORTHO05D004972 6.3e-42 175.3 234 44.0
A02p30540 Brassica napus HOM05D008086 ORTHO05D004972 1.0e-36 157.9 138 60.1
BraA02t08072Z Brassica rapa HOM05D008086 ORTHO05D004972 3.3e-35 152.9 137 58.4
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 4.8e-34 149.1 263 33.8
A02p30190 Brassica napus HOM05D008086 ORTHO05D004972 4.8e-34 149.1 140 55.7
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 4.8e-34 149.1 263 35.0
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 8.2e-34 148.3 263 32.7
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 2.4e-33 146.7 264 34.8
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 1.2e-32 144.4 266 35.0
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 2.0e-32 143.7 253 34.0
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 3.4e-32 142.9 253 32.4
AT2G03020 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 7.7e-32 141.7 257 33.9
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 7.7e-32 141.7 266 34.2
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 7.7e-32 141.7 266 34.2
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.9e-31 139.8 262 32.8
BcaNung02865 Brassica carinata HOM05D007337 ORTHO05D004972 2.5e-30 136.7 262 32.4
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 3.2e-30 136.3 262 32.1
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 5.5e-30 135.6 253 32.8
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 5.5e-30 135.6 258 33.3
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 2.7e-29 133.3 254 33.1
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 4.7e-29 132.5 241 33.6
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 4.7e-29 132.5 241 33.6
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.0e-28 131.3 268 31.3
C07p32950 Brassica napus HOM05D008086 ORTHO05D004972 6.7e-28 128.6 120 56.7
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 6.7e-28 128.6 264 31.1
C02p33330 Brassica napus HOM05D007337 ORTHO05D004972 8.8e-28 128.3 257 33.1
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.5e-27 127.5 251 32.7
Thecc.03G253000 Theobroma cacao HOM05D008086 ORTHO05D004972 2.6e-27 126.7 121 55.4
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 5.7e-27 125.6 264 31.8
Thhalv10026050m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 5.7e-27 125.6 248 33.5
QL12p012461 Quercus lobata HOM05D008086 ORTHO05D004972 7.4e-27 125.2 215 34.4
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 9.7e-27 124.8 247 31.6
A02p20510 Brassica napus HOM05D007337 ORTHO05D004972 9.7e-27 124.8 257 32.3
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 4.8e-26 122.5 232 33.2
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 6.3e-26 122.1 252 31.7
Carub.0007s2488 Capsella rubella HOM05D007337 ORTHO05D004972 2.4e-25 120.2 238 30.3
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 2.4e-25 120.2 240 32.9
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 7.0e-25 118.6 285 28.8
BolC2t09369H Brassica oleracea HOM05D007337 ORTHO05D004972 2.6e-24 116.7 278 29.9
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 2.6e-24 116.7 241 29.0
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.5e-24 116.3 274 29.2
QL12p012450 Quercus lobata HOM05D007337 ORTHO05D004972 4.5e-24 115.9 206 34.5
BcaC03g15651 Brassica carinata HOM05D007337 ORTHO05D004972 5.9e-24 115.5 271 30.3
BcaC06g33490 Brassica carinata HOM05D007337 ORTHO05D004972 7.7e-24 115.2 206 36.9
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 1.0e-23 114.8 292 28.4
BcaC09g50368 Brassica carinata HOM05D007337 ORTHO05D004972 1.3e-23 114.4 242 28.9
BcaNung00175 Brassica carinata HOM05D007337 ORTHO05D004972 1.3e-23 114.4 242 28.9
BcaNung02864 Brassica carinata HOM05D007337 ORTHO05D004972 1.7e-23 114.0 271 28.0
A03p49990 Brassica napus HOM05D007337 ORTHO05D004972 1.7e-23 114.0 263 28.9
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 2.2e-23 113.6 274 27.7
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.2e-23 113.6 218 33.0
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 6.5e-23 112.1 283 27.9
BcaC06g33494 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-22 111.3 276 27.2
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 1.5e-22 110.9 247 28.3
C01p26180 Brassica napus HOM05D007337 ORTHO05D004972 2.5e-22 110.2 244 29.1
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 2.5e-22 110.2 274 28.8
BolC7t45324H Brassica oleracea HOM05D007337 ORTHO05D004972 4.2e-22 109.4 215 36.3
A01p20850 Brassica napus HOM05D007337 ORTHO05D004972 7.2e-22 108.6 244 28.3
AL7G38280 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 9.4e-22 108.2 253 27.7
BcaC03g13098 Brassica carinata HOM05D007337 ORTHO05D004972 9.4e-22 108.2 214 32.7
BcaC09g50370 Brassica carinata HOM05D007337 ORTHO05D004972 1.2e-21 107.8 242 28.9
BolC1t02561H Brassica oleracea HOM05D007337 ORTHO05D004972 1.2e-21 107.8 242 28.9
AT4G16550 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 3.6e-21 106.3 250 26.8
C03p62430 Brassica napus HOM05D008086 ORTHO05D004972 3.6e-21 106.3 151 43.7
A03p49960 Brassica napus HOM05D007337 ORTHO05D004972 8.0e-21 105.1 255 30.2
BraA01t02003Z Brassica rapa HOM05D007337 ORTHO05D004972 8.0e-21 105.1 242 28.1
BraA03t14088Z Brassica rapa HOM05D007337 ORTHO05D004972 1.0e-20 104.8 255 30.2
BcaC06g33497 Brassica carinata HOM05D007337 ORTHO05D004972 2.0e-19 100.5 246 29.7
Sp7g15160 Schrenkiella parvula HOM05D007337 ORTHO05D004972 3.3e-19 99.8 253 27.3
C07p48000 Brassica napus HOM05D007337 ORTHO05D004972 5.7e-19 99.0 261 31.8
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 7.5e-19 98.6 260 29.2
AT4G16540 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.3e-18 97.8 121 39.7
BcaC06g33489 Brassica carinata HOM05D007337 ORTHO05D004972 1.3e-18 97.8 246 29.3
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 1.7e-18 97.4 240 30.0
C07p48020 Brassica napus HOM05D007337 ORTHO05D004972 3.7e-18 96.3 113 40.7
BolC7t45326H Brassica oleracea HOM05D007337 ORTHO05D004972 3.7e-18 96.3 113 40.7
BcaC06g33495 Brassica carinata HOM05D007337 ORTHO05D004972 4.8e-18 95.9 243 27.6
BcaNung02862 Brassica carinata HOM05D007337 ORTHO05D004972 4.8e-18 95.9 243 27.6
BraA03t14089Z Brassica rapa HOM05D007337 ORTHO05D004972 4.8e-18 95.9 212 33.0
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 6.3e-18 95.5 236 30.5
AL7G38300 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.1e-17 94.7 255 26.3
C07p47780 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-17 94.7 205 32.7
A03p49970 Brassica napus HOM05D007337 ORTHO05D004972 1.4e-17 94.4 212 32.5
AL7G38310 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 9.1e-17 91.7 249 31.3
AL7G38340 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.2e-16 91.3 243 29.6
BolC7t45302H Brassica oleracea HOM05D007337 ORTHO05D004972 1.6e-16 90.9 210 31.9
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.0e-16 90.5 265 24.9
BcaC06g33478 Brassica carinata HOM05D007337 ORTHO05D004972 4.5e-16 89.4 206 32.5
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 4.5e-16 89.4 258 27.9
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 7.7e-16 88.6 117 35.0
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 1.3e-15 87.8 236 28.8
BolC2t10844H Brassica oleracea HOM05D008086 ORTHO05D041227 2.9e-15 86.7 147 41.5
BolC3t18501H Brassica oleracea HOM05D008086 ORTHO05D004972 3.8e-15 86.3 140 40.0
CARHR222970 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.9e-14 84.0 117 35.9
BolC7t45327H Brassica oleracea HOM05D007337 ORTHO05D004972 5.5e-14 82.4 229 29.3
C07p47990 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-13 81.3 232 28.4
AT4G16555 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.7e-13 80.1 121 38.0
BcaC09g50367 Brassica carinata HOM05D007337 ORTHO05D004972 1.4e-12 77.8 161 30.4
CARHR223010 Cardamine hirsuta HOM05D007337 ORTHO05D004972 2.6e-11 73.6 88 39.8
BolC2t05997H Brassica oleracea HOM05D007337 ORTHO05D004972 4.4e-11 72.8 138 33.3
BolC4t21835H Brassica oleracea HOM05D007337 ORTHO05D004972 7.0e-09 65.5 211 26.1
BolC4t21837H Brassica oleracea HOM05D007337 ORTHO05D004972 7.0e-09 65.5 211 26.1
BolC4t21838H Brassica oleracea HOM05D007337 ORTHO05D004972 7.0e-09 65.5 211 26.1
BolC7t45323H Brassica oleracea HOM05D007337 ORTHO05D004972 1.6e-08 64.3 88 42.0
Sopen08g027190 Solanum pennellii HOM05D001099 ORTHO05D010560 2.7e-08 63.5 108 31.5
C02p48120 Brassica napus HOM05D008086 ORTHO05D041227 4.5e-08 62.8 81 45.7
CAN.G1218.23 Capsicum annuum HOM05D008086 ORTHO05D010560 5.9e-08 62.4 100 32.0
PGSC0003DMG400004806 Solanum tuberosum HOM05D008086 ORTHO05D010560 7.7e-08 62.0 100 32.0
Solyc08g078720.3 Solanum lycopersicum HOM05D008086 ORTHO05D010560 1.3e-07 61.2 108 30.6
Peaxi162Scf00002g01721 Petunia axillaris HOM05D008086 ORTHO05D010560 3.8e-07 59.7 100 31.0
Nitab4.5_0008481g0040 Nicotiana tabacum HOM05D008086 ORTHO05D010560 1.9e-06 57.4 96 34.4
Nitab4.5_0000312g0140 Nicotiana tabacum HOM05D001099 ORTHO05D010560 2.5e-06 57.0 96 33.3


User provided reference genes

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