Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p31240 Brassica napus HOM05D009070 ORTHO05D010560 1.8e-81 305.8 150 100.0
BolC7t43665H Brassica oleracea HOM05D009070 ORTHO05D010560 6.8e-81 303.9 150 99.3
A06p44940 Brassica napus HOM05D009070 ORTHO05D010560 1.6e-77 292.7 150 95.3
BraA06t27365Z Brassica rapa HOM05D009070 ORTHO05D010560 1.6e-77 292.7 150 95.3
BcaC06g31365 Brassica carinata HOM05D009070 ORTHO05D010560 1.6e-69 266.2 150 87.3
BcaC06g31339 Brassica carinata HOM05D009070 ORTHO05D010560 5.6e-67 257.7 150 83.3
BcaC06g31355 Brassica carinata HOM05D009070 ORTHO05D010560 4.3e-59 231.5 149 77.2
Sp2g12310 Schrenkiella parvula HOM05D009070 ORTHO05D010560 1.7e-55 219.5 150 72.7
Thhalv10001063m.g Eutrema salsugineum HOM05D009070 ORTHO05D010560 8.1e-50 200.7 150 64.7
C07p30530 Brassica napus HOM05D009070 ORTHO05D010560 5.4e-46 188.0 149 61.1
BolC7t43595H Brassica oleracea HOM05D009070 ORTHO05D010560 7.1e-46 187.6 150 61.3
BcaC06g34305 Brassica carinata HOM05D009070 ORTHO05D010560 1.6e-45 186.4 150 60.0
A06p45440 Brassica napus HOM05D009070 ORTHO05D010560 1.1e-43 180.3 151 60.3
BraA06t27412Z Brassica rapa HOM05D009070 ORTHO05D010560 5.6e-43 177.9 151 59.6
AT5G47600 Arabidopsis thaliana HOM05D009070 ORTHO05D010560 7.6e-40 167.5 126 63.5
AL8G10370 Arabidopsis lyrata HOM05D009070 ORTHO05D010560 8.4e-39 164.1 124 59.7
Carub.0008s0019 Capsella rubella HOM05D009070 ORTHO05D010560 1.9e-38 162.9 132 58.3
BcaC06g31338 Brassica carinata HOM05D009070 ORTHO05D010560 4.6e-37 158.3 127 60.6
CARHR173720 Cardamine hirsuta HOM05D009070 ORTHO05D010560 2.3e-36 156.0 124 57.3
BcaC06g31430 Brassica carinata HOM05D009070 ORTHO05D010560 3.9e-36 155.2 127 59.1
BcaC05g26794 Brassica carinata HOM05D009070 ORTHO05D010560 1.1e-35 153.7 117 68.4
BcaC03g16907 Brassica carinata HOM05D009070 ORTHO05D010560 2.8e-34 149.1 148 54.1
CARHR173750 Cardamine hirsuta HOM05D009070 ORTHO05D010560 9.0e-33 144.1 112 57.1
C02p48100 Brassica napus HOM05D009070 ORTHO05D010560 9.9e-32 140.6 151 52.3
Aa31LG9G5420 Aethionema arabicum HOM05D009070 ORTHO05D010560 4.9e-31 138.3 95 66.3
BraA02t08070Z Brassica rapa HOM05D009070 ORTHO05D010560 1.4e-30 136.7 148 50.7
A02p30520 Brassica napus HOM05D009070 ORTHO05D010560 2.4e-30 136.0 148 50.0
THA.LOC104812801 Tarenaya hassleriana HOM05D009070 ORTHO05D010560 5.5e-30 134.8 96 57.3
BolC2t10841H Brassica oleracea HOM05D009070 ORTHO05D010560 7.1e-30 134.4 144 50.0
BcaB08g35845 Brassica carinata HOM05D009070 ORTHO05D010560 8.2e-26 120.9 67 85.1
Actinidia02127 Actinidia chinensis HOM05D009070 ORTHO05D010560 3.8e-15 85.5 95 35.8
C03p42220 Brassica napus HOM05D009070 ORTHO05D010560 5.5e-14 81.6 86 47.7
Rhsim05G0054600 Rhododendron simsii HOM05D009070 ORTHO05D010560 2.1e-13 79.7 95 34.7
Sabra03G0046400 Salix brachista HOM05D009070 ORTHO05D010560 3.3e-11 72.4 95 36.8
Dinv39135 Davidia involucrata HOM05D009070 ORTHO05D010560 4.3e-11 72.0 101 33.7
Hma1.2p1_1786F.1_g302310 Hydrangea macrophylla HOM05D001099 ORTHO05D010560 6.3e-10 68.2 94 34.0
vmacro20795 Vaccinium macrocarpon HOM05D009070 ORTHO05D010560 1.1e-09 67.4 97 34.0
COL.COLO4_37190 Corchorus olitorius HOM05D007337 ORTHO05D010560 4.1e-09 65.5 86 32.6
Rhsim09G0039000 Rhododendron simsii HOM05D007337 ORTHO05D000958 9.1e-09 64.3 93 33.3
SEGI_13652 Sequoiadendron giganteum HOM05D001099 ORTHO05D000958 5.9e-08 61.6 90 31.1
Oeu038321.1 Olea europaea HOM05D001099 ORTHO05D000958 1.0e-07 60.8 90 32.2
Atru.chr9.1326 Acer truncatum HOM05D001099 ORTHO05D000958 1.7e-07 60.1 90 31.1
EL10Ac5g13076 Beta vulgaris HOM05D001099 ORTHO05D000958 2.2e-07 59.7 84 31.0
Manes.14G036000 Manihot esculenta HOM05D001099 ORTHO05D000958 2.2e-07 59.7 101 29.7
Nitab4.5_0007598g0030 Nicotiana tabacum HOM05D001099 ORTHO05D000958 2.2e-07 59.7 94 29.8
Rhsim07G0020900 Rhododendron simsii HOM05D001099 ORTHO05D000958 2.2e-07 59.7 103 29.1
A02p30530 Brassica napus HOM05D008086 ORTHO05D004972 2.9e-07 59.3 100 35.0
C07p31230 Brassica napus HOM05D008086 ORTHO05D004972 2.9e-07 59.3 112 33.0
BolC7t43664H Brassica oleracea HOM05D008086 ORTHO05D004972 2.9e-07 59.3 112 33.0
Nitab4.5_0000312g0140 Nicotiana tabacum HOM05D001099 ORTHO05D010560 2.9e-07 59.3 116 28.4
RcHm_v2.0_Chr7g0203041 Rosa chinensis HOM05D001099 ORTHO05D000958 2.9e-07 59.3 90 27.8
C07p30540 Brassica napus HOM05D008086 ORTHO05D004972 3.8e-07 58.9 100 35.0
PGR042G2034 Punica granatum HOM05D001099 ORTHO05D000958 5.0e-07 58.5 91 29.7
BraA06t27411Z Brassica rapa HOM05D008086 ORTHO05D004972 6.5e-07 58.2 100 35.0
MELO3C013945.2 Cucumis melo HOM05D001099 ORTHO05D000958 6.5e-07 58.2 100 28.0
Thecc.03G155700 Theobroma cacao HOM05D001099 ORTHO05D000958 6.5e-07 58.2 101 29.7
BcaC03g16869 Brassica carinata HOM05D008086 ORTHO05D004972 1.1e-06 57.4 102 34.3
BcaC03g17198 Brassica carinata HOM05D008086 ORTHO05D004972 1.4e-06 57.0 98 33.7
A02p30570 Brassica napus HOM05D008086 ORTHO05D004972 1.4e-06 57.0 102 33.3
C02p51250 Brassica napus HOM05D008086 ORTHO05D004972 1.4e-06 57.0 98 33.7
BolC2t11215H Brassica oleracea HOM05D008086 ORTHO05D004972 1.4e-06 57.0 98 33.7
BraA02t08074Z Brassica rapa HOM05D008086 ORTHO05D004972 1.4e-06 57.0 102 33.3
Dinv21632 Davidia involucrata HOM05D001099 ORTHO05D000958 1.4e-06 57.0 102 27.5
FAN04G1733 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.4e-06 57.0 89 28.1
Sed0013728 Sechium edule HOM05D001099 ORTHO05D000958 1.4e-06 57.0 106 27.4
FAN08G3558 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.9e-06 56.6 89 28.1
AL1G23450 Arabidopsis lyrata HOM05D037278 ORTHO05D031405 2.5e-06 56.2 77 39.0
AUR62007509 Chenopodium quinoa HOM05D001099 ORTHO05D000958 2.5e-06 56.2 84 28.6
AUR62039962 Chenopodium quinoa HOM05D001099 ORTHO05D000958 2.5e-06 56.2 84 28.6
MELO3C013946.2 Cucumis melo HOM05D001099 ORTHO05D000958 2.5e-06 56.2 100 27.0
Dinv21628 Davidia involucrata HOM05D001099 ORTHO05D010560 2.5e-06 56.2 136 30.1
GSVIVG01018654001 Vitis vinifera HOM05D001099 ORTHO05D000958 2.5e-06 56.2 102 29.4
BolC2t10802H Brassica oleracea HOM05D008086 ORTHO05D004972 3.2e-06 55.8 102 33.3
CsaV3_3G002770 Cucumis sativus L. HOM05D001099 ORTHO05D000958 3.2e-06 55.8 100 27.0
FAN13G2298 Fragaria x ananassa HOM05D001099 ORTHO05D000958 3.2e-06 55.8 89 28.1
Prupe.5G071200 Prunus persica HOM05D001099 ORTHO05D000958 3.2e-06 55.8 90 25.6
Manes.06G134700 Manihot esculenta HOM05D001099 ORTHO05D000958 4.2e-06 55.5 102 29.4
Medtr0004s0510 Medicago truncatula HOM05D001099 ORTHO05D000958 4.2e-06 55.5 90 30.0
Nn1g01033 Nelumbo nucifera HOM05D001099 ORTHO05D000958 4.2e-06 55.5 114 25.4
Nn6g33979 Nelumbo nucifera HOM05D001099 ORTHO05D000958 4.2e-06 55.5 102 26.5
TWI23G0452 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 4.2e-06 55.5 102 27.5
Cpa.g.sc3.323 Carica papaya HOM05D001099 ORTHO05D000958 5.5e-06 55.1 101 26.7
ClCG10G002740 Citrullus lanatus HOM05D001099 ORTHO05D000958 5.5e-06 55.1 100 26.0
arahy.Tifrunner.gnm1.ann1.PCT7KU Arachis hypogaea HOM05D001099 ORTHO05D000958 7.2e-06 54.7 101 26.7
arahy.Tifrunner.gnm1.ann1.TQI4QJ Arachis hypogaea HOM05D001099 ORTHO05D000958 7.2e-06 54.7 101 26.7
BcaC06g34302 Brassica carinata HOM05D008086 ORTHO05D004972 7.2e-06 54.7 96 34.4
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 7.2e-06 54.7 100 33.0
ClCG04G005380 Citrullus lanatus HOM05D001099 ORTHO05D000958 7.2e-06 54.7 100 26.0
CsaV3_3G002780 Cucumis sativus L. HOM05D001099 ORTHO05D000958 7.2e-06 54.7 100 27.0
Gorai.008G216100 Gossypium raimondii HOM05D001099 ORTHO05D000958 7.2e-06 54.7 101 29.7
MBI05_g10091_MAGBIO Magnolia biondii HOM05D001099 ORTHO05D000958 7.2e-06 54.7 97 25.8
PGR031G0040 Punica granatum HOM05D001099 ORTHO05D000958 7.2e-06 54.7 89 29.2
A01p41900 Brassica napus HOM05D008086 ORTHO05D004972 9.4e-06 54.3 100 34.0
BolC1t05406H Brassica oleracea HOM05D008086 ORTHO05D004972 9.4e-06 54.3 98 32.7
Dinv28574 Davidia involucrata HOM05D001099 ORTHO05D000958 9.4e-06 54.3 102 28.4
FvH4_5g18720 Fragaria vesca HOM05D001099 ORTHO05D000958 9.4e-06 54.3 89 28.1
FAN18G3089 Fragaria x ananassa HOM05D001099 ORTHO05D000958 9.4e-06 54.3 89 28.1
Nitab4.5_0001318g0050 Nicotiana tabacum HOM05D001099 ORTHO05D000958 9.4e-06 54.3 87 33.3
Psat4g136720 Pisum sativum HOM05D001099 ORTHO05D000958 9.4e-06 54.3 86 30.2
Hund11593 Selenicereus undatus HOM05D001099 ORTHO05D000958 9.4e-06 54.3 84 31.0
TWI39G1145 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 9.4e-06 54.3 102 28.4


User provided reference genes

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