Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p30780 Brassica napus HOM05D004467 ORTHO05D004918 1.6e-56 222.6 117 100.0
A01p20730 Brassica napus HOM05D004467 ORTHO05D004918 6.5e-55 217.2 117 98.3
A03p60110 Brassica napus HOM05D004467 ORTHO05D004918 6.5e-55 217.2 117 98.3
A04p00920 Brassica napus HOM05D004467 ORTHO05D004918 6.5e-55 217.2 117 98.3
A09p39280 Brassica napus HOM05D004467 ORTHO05D004918 6.5e-55 217.2 117 98.3
A09p54700 Brassica napus HOM05D004467 ORTHO05D004918 1.9e-54 215.7 117 97.4
A02p34050 Brassica napus HOM05D004467 ORTHO05D004918 8.2e-50 200.3 117 93.2
A03p58480 Brassica napus HOM05D004467 ORTHO05D004918 2.0e-40 169.1 119 79.8
BraA03t14909Z Brassica rapa HOM05D004467 ORTHO05D004918 2.0e-40 169.1 119 79.8
BcaNung02901 Brassica carinata HOM05D004467 ORTHO05D004918 4.7e-37 157.9 122 75.4
C07p56500 Brassica napus HOM05D004467 ORTHO05D004918 4.7e-37 157.9 122 75.4
BolC7t46129H Brassica oleracea HOM05D004467 ORTHO05D004918 4.9e-34 147.9 123 71.5
Sp7g26880 Schrenkiella parvula HOM05D004467 ORTHO05D004918 5.4e-33 144.4 141 61.7
AT4G28910 Arabidopsis thaliana HOM05D004467 ORTHO05D004918 1.2e-32 143.3 141 62.4
Carub.0007s1175 Capsella rubella HOM05D004467 ORTHO05D004918 4.5e-32 141.4 141 61.0
Thhalv10025262m.g Eutrema salsugineum HOM05D004467 ORTHO05D004918 1.0e-31 140.2 118 66.9
A01p09030 Brassica napus HOM05D004467 ORTHO05D004918 2.9e-31 138.7 118 66.9
BraA01t00851Z Brassica rapa HOM05D004467 ORTHO05D004918 2.9e-31 138.7 118 66.9
AL7G23580 Arabidopsis lyrata HOM05D004467 ORTHO05D004918 8.6e-31 137.1 141 59.6
BcaC09g51670 Brassica carinata HOM05D004467 ORTHO05D004918 2.5e-30 135.6 116 66.4
BcaNung06399 Brassica carinata HOM05D004467 ORTHO05D004918 2.5e-30 135.6 116 66.4
C01p10580 Brassica napus HOM05D004467 ORTHO05D004918 2.5e-30 135.6 116 66.4
BolC1t01020H Brassica oleracea HOM05D004467 ORTHO05D004918 2.5e-30 135.6 116 66.4
CARHR236680 Cardamine hirsuta HOM05D004467 ORTHO05D004918 3.3e-30 135.2 117 67.5
BcaNung01350 Brassica carinata HOM05D004467 ORTHO05D004918 9.5e-30 133.7 119 63.9
A05p18840 Brassica napus HOM05D004467 ORTHO05D004918 1.9e-22 109.4 55 100.0
Aa31LG2G21270 Aethionema arabicum HOM05D004467 ORTHO05D004918 4.3e-22 108.2 114 55.3
A01p21180 Brassica napus HOM05D004467 ORTHO05D004918 5.6e-22 107.8 55 98.2
THA.LOC104820046 Tarenaya hassleriana HOM05D004467 ORTHO05D004918 4.0e-20 101.7 111 55.0
THA.LOC104814564 Tarenaya hassleriana HOM05D004467 ORTHO05D004918 1.2e-16 90.1 114 54.4
Thecc.09G104300 Theobroma cacao HOM05D004467 ORTHO05D004918 4.7e-13 78.2 123 43.1
Aa31LG8G16970 Aethionema arabicum HOM05D004467 ORTHO05D004918 6.2e-13 77.8 105 46.7
Atru.chr7.1422 Acer truncatum HOM05D004467 ORTHO05D004918 1.4e-12 76.6 119 42.9
Hma1.2p1_0945F.1_g240200 Hydrangea macrophylla HOM05D004467 ORTHO05D004918 5.2e-12 74.7 135 40.0
Prupe.7G224200 Prunus persica HOM05D004467 ORTHO05D004918 8.9e-12 73.9 120 42.5
CANSAT56G0937 Cannabis sativa HOM05D004467 ORTHO05D004918 1.2e-11 73.6 114 44.7
Dinv41649 Davidia involucrata HOM05D004467 ORTHO05D004918 1.2e-11 73.6 93 49.5
FAN28G1510 Fragaria x ananassa HOM05D004467 ORTHO05D004918 1.2e-11 73.6 92 44.6
FAN26G1468 Fragaria x ananassa HOM05D004467 ORTHO05D004918 2.0e-11 72.8 109 40.4
FAN26G2528 Fragaria x ananassa HOM05D004467 ORTHO05D004918 2.0e-11 72.8 109 40.4
COL.COLO4_34790 Corchorus olitorius HOM05D004467 ORTHO05D004918 5.8e-11 71.2 124 41.9
FAN23G1822 Fragaria x ananassa HOM05D004467 ORTHO05D004918 7.5e-11 70.9 92 44.6
RcHm_v2.0_Chr2g0091401 Rosa chinensis HOM05D004467 ORTHO05D004918 9.9e-11 70.5 92 44.6
PGR102G2224 Punica granatum HOM05D004467 ORTHO05D004918 1.3e-10 70.1 105 44.8
Cpa.g.sc40.31 Carica papaya HOM05D004467 ORTHO05D004918 1.7e-10 69.7 118 40.7
CiPaw.03G227200 Carya illinoinensis HOM05D004467 ORTHO05D004918 1.7e-10 69.7 122 41.8
Ciclev10008049m.g Citrus clementina HOM05D004467 ORTHO05D004918 1.7e-10 69.7 122 42.6
Haze_25793 Corylus avellana HOM05D004467 ORTHO05D004918 1.7e-10 69.7 122 41.0
MD15G1193100 Malus domestica HOM05D004467 ORTHO05D004918 1.7e-10 69.7 119 41.2
Duzib168G1064 Durio zibethinus HOM05D004467 ORTHO05D004918 2.2e-10 69.3 123 41.5
Sed0017359 Sechium edule HOM05D004467 ORTHO05D004918 6.4e-10 67.8 119 38.7
Manes.03G024900 Manihot esculenta HOM05D004467 ORTHO05D004918 8.3e-10 67.4 123 40.7
Lj7C659T11 Lonicera japonica HOM05D004467 ORTHO05D004918 1.1e-09 67.0 123 38.2
Manes.16G111600 Manihot esculenta HOM05D004467 ORTHO05D004918 1.1e-09 67.0 124 42.7
arahy.Tifrunner.gnm1.ann1.6QT9XW Arachis hypogaea HOM05D004467 ORTHO05D004918 1.4e-09 66.6 118 41.5
Duzib187G1021 Durio zibethinus HOM05D004467 ORTHO05D004918 1.4e-09 66.6 115 45.2
Cfa003215 Carpinus fangiana HOM05D004467 ORTHO05D004918 2.4e-09 65.9 122 40.2
FvH4_1g05760 Fragaria vesca HOM05D004467 ORTHO05D004918 2.4e-09 65.9 93 43.0
FAN19G0416 Fragaria x ananassa HOM05D004467 ORTHO05D004918 2.4e-09 65.9 93 43.0
arahy.Tifrunner.gnm1.ann1.4I8WV5 Arachis hypogaea HOM05D004467 ORTHO05D004918 4.1e-09 65.1 118 40.7
Eucgr.C03788 Eucalyptus grandis HOM05D004467 ORTHO05D004918 4.1e-09 65.1 102 40.2
Gorai.009G027000 Gossypium raimondii HOM05D004467 ORTHO05D004918 4.1e-09 65.1 123 38.2
QL02p042682 Quercus lobata HOM05D004467 ORTHO05D004918 4.1e-09 65.1 124 37.9
QL02p042959 Quercus lobata HOM05D004467 ORTHO05D004918 4.1e-09 65.1 124 37.9
TWI32G0931 Tripterygium wilfordii HOM05D004467 ORTHO05D004918 5.4e-09 64.7 120 40.0
Gohir.D05G026900 Gossypium hirsutum HOM05D004467 ORTHO05D004918 7.1e-09 64.3 123 38.2
Phvul.004G169100 Phaseolus vulgaris HOM05D004467 ORTHO05D004918 1.2e-08 63.5 122 36.9
ClCG11G002290 Citrullus lanatus HOM05D004467 ORTHO05D004918 2.7e-08 62.4 120 37.5
Gohir.A05G025400 Gossypium hirsutum HOM05D004467 ORTHO05D004918 2.7e-08 62.4 120 39.2
Gohir.A06G065600 Gossypium hirsutum HOM05D004467 ORTHO05D004918 2.7e-08 62.4 92 46.7
Rhsim05G0042300 Rhododendron simsii HOM05D004467 ORTHO05D004918 3.5e-08 62.0 118 42.4
Gorai.010G074900 Gossypium raimondii HOM05D004467 ORTHO05D004918 4.6e-08 61.6 92 46.7
VMungo0464G1817 Vigna mungo HOM05D004467 ORTHO05D004918 4.6e-08 61.6 122 36.1
Gohir.D06G064200 Gossypium hirsutum HOM05D004467 ORTHO05D004918 7.8e-08 60.8 92 46.7
Oeu053753.2 Olea europaea HOM05D004467 ORTHO05D004918 7.8e-08 60.8 122 38.5
MELO3C004575.2 Cucumis melo HOM05D004467 ORTHO05D004918 1.0e-07 60.5 121 38.0
CsaV3_2G002070 Cucumis sativus L. HOM05D004467 ORTHO05D004918 1.3e-07 60.1 120 36.7
DCAR_024697 Daucus carota HOM05D004467 ORTHO05D004918 3.0e-07 58.9 115 36.5
Aqoxy7G01500 Aquilegia oxysepala HOM05D004467 ORTHO05D004918 3.9e-07 58.5 127 37.0
Ca_25554_v3 Cicer arietinum L. HOM05D004467 ORTHO05D004918 5.1e-07 58.2 90 40.0
TWI63G0792 Tripterygium wilfordii HOM05D004467 ORTHO05D004918 6.6e-07 57.8 120 37.5
Lalb_Chr16g0388041 Lupinus albus HOM05D004467 ORTHO05D004918 8.6e-07 57.4 121 37.2
TAR626G1578 Trochodendron aralioides HOM05D004467 ORTHO05D004918 1.5e-06 56.6 89 42.7
TAR636G0217 Trochodendron aralioides HOM05D004467 ORTHO05D004918 1.5e-06 56.6 89 42.7
Actinidia20407 Actinidia chinensis HOM05D004467 ORTHO05D004918 1.9e-06 56.2 104 43.3
Migut.K00515 Erythranthe guttata HOM05D004467 ORTHO05D004918 5.6e-06 54.7 88 39.8
Lj8C70G12 Lonicera japonica HOM05D004467 ORTHO05D004918 5.6e-06 54.7 121 34.7
Lalb_Chr05g0223111 Lupinus albus HOM05D004467 ORTHO05D004918 5.6e-06 54.7 111 39.6
Medtr6g087140 Medicago truncatula HOM05D004467 ORTHO05D004918 5.6e-06 54.7 119 35.3
AUR62010932 Chenopodium quinoa HOM05D004467 ORTHO05D004918 7.3e-06 54.3 91 35.2
Peaxi162Scf00539g00210 Petunia axillaris HOM05D004467 ORTHO05D004918 7.3e-06 54.3 117 34.2
Sed0000460 Sechium edule HOM05D004467 ORTHO05D004918 7.3e-06 54.3 102 38.2
Hund26245 Selenicereus undatus HOM05D004467 ORTHO05D004918 7.3e-06 54.3 94 37.2
CSS0045223 Camellia sinensis var. sinensis HOM05D004467 ORTHO05D004918 9.5e-06 53.9 120 36.7
CSS0050424 Camellia sinensis var. sinensis HOM05D004467 ORTHO05D004918 9.5e-06 53.9 121 39.7
Glyma.01G146400 Glycine max HOM05D004467 ORTHO05D004918 9.5e-06 53.9 122 34.4


User provided reference genes

Program Settings