Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p30620 Brassica napus HOM05D008727 ORTHO05D011379 6.1e-106 387.5 196 100.0
BolC7t43602H Brassica oleracea HOM05D008727 ORTHO05D011379 1.5e-104 382.9 196 99.0
BcaC06g34299 Brassica carinata HOM05D008727 ORTHO05D011379 5.7e-104 380.9 194 99.0
A06p45400 Brassica napus HOM05D008727 ORTHO05D011379 1.1e-99 366.7 196 95.4
BraA06t27408Z Brassica rapa HOM05D008727 ORTHO05D011379 1.6e-98 362.8 196 94.4
BcaC06g31426 Brassica carinata HOM05D008727 ORTHO05D011379 4.9e-79 298.1 182 81.9
A06p45410 Brassica napus HOM05D008727 ORTHO05D011379 3.3e-67 258.8 184 71.2
BraA06t27409Z Brassica rapa HOM05D008727 ORTHO05D011379 3.3e-67 258.8 184 71.2
BcaC06g31427 Brassica carinata HOM05D008727 ORTHO05D011379 8.1e-66 254.2 183 71.6
BcaC06g34300 Brassica carinata HOM05D008727 ORTHO05D011379 4.0e-65 251.9 184 70.1
C07p30610 Brassica napus HOM05D008727 ORTHO05D011379 5.2e-65 251.5 184 70.1
BolC7t43601H Brassica oleracea HOM05D008727 ORTHO05D011379 5.2e-65 251.5 184 70.1
BcaB07g30480 Brassica carinata HOM05D008727 ORTHO05D011379 4.6e-61 238.4 184 67.9
BolC9t60173H Brassica oleracea HOM05D008727 ORTHO05D011379 1.1e-59 233.8 192 63.0
C09p74390 Brassica napus HOM05D008727 ORTHO05D011379 5.6e-59 231.5 192 62.5
A06p45420 Brassica napus HOM05D008727 ORTHO05D011379 5.2e-57 224.9 174 69.0
BraA06t27410Z Brassica rapa HOM05D008727 ORTHO05D011379 5.2e-57 224.9 174 69.0
BcaC06g31428 Brassica carinata HOM05D008727 ORTHO05D011379 2.9e-55 219.2 169 68.6
BraA10t45379Z Brassica rapa HOM05D008727 ORTHO05D011379 2.9e-55 219.2 184 62.5
A10p33490 Brassica napus HOM05D008727 ORTHO05D011379 7.1e-54 214.5 184 62.5
BcaNung04448 Brassica carinata HOM05D008727 ORTHO05D011379 8.1e-50 201.1 144 70.1
Thhalv10001116m.g Eutrema salsugineum HOM05D008727 ORTHO05D011379 1.2e-48 197.2 181 57.5
AL1G65050 Arabidopsis lyrata HOM05D008727 ORTHO05D011379 7.8e-45 184.5 181 53.6
Carub.0002s0896 Capsella rubella HOM05D008727 ORTHO05D011379 6.6e-44 181.4 181 51.9
AT1G54620 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 2.5e-43 179.5 183 53.6
Sp2g11770 Schrenkiella parvula HOM05D008727 ORTHO05D011379 3.1e-41 172.6 181 52.5
AT5G46990 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 3.8e-39 165.6 181 49.2
Thhalv10001202m.g Eutrema salsugineum HOM05D008727 ORTHO05D001261 1.1e-38 164.1 191 47.1
Sp2g11780 Schrenkiella parvula HOM05D008727 ORTHO05D001261 1.4e-38 163.7 177 51.4
AT5G46980 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 3.2e-38 162.5 181 50.8
Carub.0008s0084 Capsella rubella HOM05D008727 ORTHO05D011379 1.6e-37 160.2 181 47.5
Carub.0008s0086 Capsella rubella HOM05D008727 ORTHO05D011379 2.5e-35 152.9 181 44.2
Sp2g11790 Schrenkiella parvula HOM05D008727 ORTHO05D001261 4.3e-35 152.1 181 48.1
Carub.0008s0088 Capsella rubella HOM05D008727 ORTHO05D011379 1.4e-33 147.1 167 49.1
BcaC03g16915 Brassica carinata HOM05D008727 ORTHO05D023847 9.0e-33 144.4 177 48.6
C02p48180 Brassica napus HOM05D008727 ORTHO05D023847 9.0e-33 144.4 177 48.6
BolC2t10850H Brassica oleracea HOM05D008727 ORTHO05D023847 3.4e-32 142.5 177 48.0
A02p30610 Brassica napus HOM05D008727 ORTHO05D023847 1.3e-31 140.6 177 48.0
BraA02t08079Z Brassica rapa HOM05D008727 ORTHO05D023847 1.3e-31 140.6 177 48.0
CARHR055710 Cardamine hirsuta HOM05D008727 ORTHO05D011379 1.3e-31 140.6 178 46.1
BcaC06g34301 Brassica carinata HOM05D008727 ORTHO05D011379 1.8e-28 130.2 124 58.1
AL8G11310 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 7.9e-21 104.8 183 38.3
Carub.0008s0089 Capsella rubella HOM05D001445 ORTHO05D001261 1.1e-19 100.9 182 36.8
Aa31LG9G5990 Aethionema arabicum HOM05D001445 ORTHO05D001261 2.5e-19 99.8 175 37.7
AL8G11340 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 4.3e-19 99.0 188 35.1
Aa31sc241G60 Aethionema arabicum HOM05D001445 ORTHO05D001261 1.6e-18 97.1 176 34.7
AT5G46930 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 1.6e-18 97.1 188 35.6
AL8G11330 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 4.8e-18 95.5 182 35.7
Thhalv10001100m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 6.3e-18 95.1 183 37.2
CARHR174500 Cardamine hirsuta HOM05D001445 ORTHO05D001261 1.1e-17 94.4 181 34.8
Aa31sc241G40 Aethionema arabicum HOM05D001445 ORTHO05D001261 1.4e-17 94.0 176 34.1
AT5G46970 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 6.9e-17 91.7 172 36.0
Carub.0008s0092 Capsella rubella HOM05D001445 ORTHO05D001261 6.9e-17 91.7 188 33.5
AT5G46940 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 9.0e-17 91.3 182 35.2
AL8G11300 Arabidopsis lyrata HOM05D008727 ORTHO05D011379 1.2e-16 90.9 137 40.9
Sp2g11740 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.2e-16 90.9 181 34.3
C02p47650 Brassica napus HOM05D001445 ORTHO05D001261 2.0e-16 90.1 182 34.6
BolC2t10801H Brassica oleracea HOM05D001445 ORTHO05D001261 2.0e-16 90.1 182 34.6
BcaB07g30808 Brassica carinata HOM05D001445 ORTHO05D001261 5.9e-16 88.6 182 35.7
BcaC03g16912 Brassica carinata HOM05D001445 ORTHO05D001261 5.9e-16 88.6 182 34.6
C02p48140 Brassica napus HOM05D001445 ORTHO05D001261 5.9e-16 88.6 182 34.6
BolC2t10846H Brassica oleracea HOM05D001445 ORTHO05D001261 5.9e-16 88.6 182 34.6
Sp2g11760 Schrenkiella parvula HOM05D001445 ORTHO05D001261 5.9e-16 88.6 183 34.4
C03p62420 Brassica napus HOM05D001445 ORTHO05D001261 1.3e-15 87.4 182 34.6
Sp2g11720 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.7e-15 87.0 183 33.9
A02p30180 Brassica napus HOM05D001445 ORTHO05D001261 3.8e-15 85.9 182 34.1
BraA02t08034Z Brassica rapa HOM05D001445 ORTHO05D001261 3.8e-15 85.9 182 35.2
Carub.0008s0090 Capsella rubella HOM05D001445 ORTHO05D001261 6.5e-15 85.1 181 34.3
BcaC03g16868 Brassica carinata HOM05D001445 ORTHO05D001261 8.5e-15 84.7 182 33.5
A02p30560 Brassica napus HOM05D001445 ORTHO05D001261 1.4e-14 84.0 181 34.8
C02p48090 Brassica napus HOM05D001445 ORTHO05D001261 1.4e-14 84.0 178 33.1
BolC2t10840H Brassica oleracea HOM05D001445 ORTHO05D001261 1.4e-14 84.0 178 33.1
Carub.0008s0091 Capsella rubella HOM05D001445 ORTHO05D001261 1.4e-14 84.0 177 33.3
CARHR174480 Cardamine hirsuta HOM05D001445 ORTHO05D001261 1.4e-14 84.0 162 35.8
BolC3t18500H Brassica oleracea HOM05D001445 ORTHO05D001261 5.5e-14 82.0 182 33.5
A02p30590 Brassica napus HOM05D001445 ORTHO05D001261 1.6e-13 80.5 182 32.4
Thhalv10001199m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 2.1e-13 80.1 182 33.0
A02p30580 Brassica napus HOM05D001445 ORTHO05D001261 2.7e-13 79.7 184 34.2
BraA02t08076Z Brassica rapa HOM05D001445 ORTHO05D001261 3.6e-13 79.3 184 34.2
Sp2g11750 Schrenkiella parvula HOM05D001445 ORTHO05D001261 4.6e-13 79.0 182 33.5
BcaC03g16913 Brassica carinata HOM05D001445 ORTHO05D001261 1.4e-12 77.4 182 32.4
C02p48150 Brassica napus HOM05D001445 ORTHO05D001261 1.4e-12 77.4 182 32.4
BolC2t10847H Brassica oleracea HOM05D001445 ORTHO05D001261 1.4e-12 77.4 182 32.4
Thhalv10001105m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 1.4e-12 77.4 180 32.2
TWI15G1112 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 5.1e-12 75.5 167 29.3
A06p45680 Brassica napus HOM05D001445 ORTHO05D001261 8.8e-12 74.7 182 31.3
BraA06t27437Z Brassica rapa HOM05D001445 ORTHO05D001261 2.0e-11 73.6 178 31.5
BraA02t08073Z Brassica rapa HOM05D001445 ORTHO05D001261 2.5e-11 73.2 183 33.3
CANSAT21G0328 Cannabis sativa HOM05D001445 ORTHO05D001261 3.3e-11 72.8 146 30.1
BolC7t43597H Brassica oleracea HOM05D008727 ORTHO05D040202 7.4e-11 71.6 59 62.7
Psat4g219240 Pisum sativum HOM05D001445 ORTHO05D001261 1.7e-10 70.5 173 29.5
AL8G11320 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 2.8e-10 69.7 181 28.7
MELO3C003367.2 Cucumis melo HOM05D001445 ORTHO05D001261 2.8e-10 69.7 135 30.4
C07p30580 Brassica napus HOM05D008727 ORTHO05D040202 3.7e-10 69.3 54 64.8
Duzib205G0415 Durio zibethinus HOM05D001445 ORTHO05D001261 1.4e-09 67.4 163 30.7
BcaC03g16906 Brassica carinata HOM05D001445 ORTHO05D001261 2.4e-09 66.6 169 30.8
COL.COLO4_17126 Corchorus olitorius HOM05D001445 ORTHO05D001261 2.4e-09 66.6 185 29.2
Sp2g11730 Schrenkiella parvula HOM05D001445 ORTHO05D001261 3.1e-09 66.2 182 30.2
Sed0025391 Sechium edule HOM05D001445 ORTHO05D001261 9.1e-09 64.7 166 28.3
BcaB08g36203 Brassica carinata HOM05D001445 ORTHO05D001261 1.5e-08 63.9 182 31.3
Phvul.010G041500 Phaseolus vulgaris HOM05D001445 ORTHO05D001261 4.5e-08 62.4 185 26.5
Thecc.01G402600 Theobroma cacao HOM05D001445 ORTHO05D001261 4.5e-08 62.4 184 27.2
AT5G46950 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 5.9e-08 62.0 196 28.1
VMungo0331G1992 Vigna mungo HOM05D001445 ORTHO05D001261 2.9e-07 59.7 179 25.1
Gohir.A08G140800 Gossypium hirsutum HOM05D001445 ORTHO05D001261 1.1e-06 57.8 182 25.3
Duzib133G0634 Durio zibethinus HOM05D001445 ORTHO05D001261 2.5e-06 56.6 164 26.2


User provided reference genes

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