Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p30610 Brassica napus HOM05D008727 ORTHO05D011379 3.2e-96 355.1 187 100.0
BolC7t43601H Brassica oleracea HOM05D008727 ORTHO05D011379 3.2e-96 355.1 187 100.0
BcaC06g34300 Brassica carinata HOM05D008727 ORTHO05D011379 1.2e-95 353.2 187 99.5
BraA06t27409Z Brassica rapa HOM05D008727 ORTHO05D011379 1.1e-91 340.1 187 95.2
A06p45410 Brassica napus HOM05D008727 ORTHO05D011379 4.1e-91 338.2 187 94.7
BcaC06g31427 Brassica carinata HOM05D008727 ORTHO05D011379 3.6e-71 271.9 188 74.5
BcaC06g31426 Brassica carinata HOM05D008727 ORTHO05D011379 9.4e-64 247.3 183 69.9
A06p45400 Brassica napus HOM05D008727 ORTHO05D011379 6.1e-63 244.6 187 69.0
C07p30620 Brassica napus HOM05D008727 ORTHO05D011379 6.1e-63 244.6 184 70.1
BolC7t43602H Brassica oleracea HOM05D008727 ORTHO05D011379 1.0e-62 243.8 184 70.1
BraA06t27408Z Brassica rapa HOM05D008727 ORTHO05D011379 1.0e-62 243.8 187 68.4
BcaC06g34299 Brassica carinata HOM05D008727 ORTHO05D011379 1.5e-61 240.0 182 69.8
BcaB07g30480 Brassica carinata HOM05D008727 ORTHO05D011379 3.8e-57 225.3 181 66.3
A06p45420 Brassica napus HOM05D008727 ORTHO05D011379 2.1e-55 219.5 174 66.1
BraA06t27410Z Brassica rapa HOM05D008727 ORTHO05D011379 2.1e-55 219.5 174 66.1
BolC9t60173H Brassica oleracea HOM05D008727 ORTHO05D011379 2.7e-55 219.2 174 66.1
C09p74390 Brassica napus HOM05D008727 ORTHO05D011379 5.2e-54 214.9 174 65.5
BcaC06g31428 Brassica carinata HOM05D008727 ORTHO05D011379 2.6e-53 212.6 162 67.9
BraA10t45379Z Brassica rapa HOM05D008727 ORTHO05D011379 1.2e-50 203.8 180 61.7
A10p33490 Brassica napus HOM05D008727 ORTHO05D011379 1.7e-49 199.9 180 61.7
Thhalv10001116m.g Eutrema salsugineum HOM05D008727 ORTHO05D011379 1.8e-46 189.9 179 57.5
BcaNung04448 Brassica carinata HOM05D008727 ORTHO05D011379 1.3e-44 183.7 140 68.6
Carub.0002s0896 Capsella rubella HOM05D008727 ORTHO05D011379 4.9e-44 181.8 179 55.3
AL1G65050 Arabidopsis lyrata HOM05D008727 ORTHO05D011379 1.8e-43 179.9 179 55.3
AT1G54620 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 1.6e-42 176.8 185 54.1
Sp2g11770 Schrenkiella parvula HOM05D008727 ORTHO05D011379 1.5e-40 170.2 178 53.4
Sp2g11780 Schrenkiella parvula HOM05D008727 ORTHO05D001261 1.2e-39 167.2 176 52.8
Thhalv10001202m.g Eutrema salsugineum HOM05D008727 ORTHO05D001261 1.8e-38 163.3 178 51.1
AT5G46990 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 4.0e-38 162.2 176 50.0
AT5G46980 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 8.9e-38 161.0 177 52.5
Sp2g11790 Schrenkiella parvula HOM05D008727 ORTHO05D001261 1.5e-37 160.2 177 52.0
Carub.0008s0084 Capsella rubella HOM05D008727 ORTHO05D011379 7.5e-37 157.9 176 48.9
Carub.0008s0086 Capsella rubella HOM05D008727 ORTHO05D011379 4.1e-35 152.1 186 45.2
Carub.0008s0088 Capsella rubella HOM05D008727 ORTHO05D011379 3.5e-34 149.1 166 52.4
BcaC03g16915 Brassica carinata HOM05D008727 ORTHO05D023847 7.3e-32 141.4 179 49.7
C02p48180 Brassica napus HOM05D008727 ORTHO05D023847 7.3e-32 141.4 179 49.7
BolC2t10850H Brassica oleracea HOM05D008727 ORTHO05D023847 2.8e-31 139.4 179 49.2
BraA02t08079Z Brassica rapa HOM05D008727 ORTHO05D023847 8.0e-31 137.9 179 48.6
A02p30610 Brassica napus HOM05D008727 ORTHO05D023847 1.0e-30 137.5 179 48.6
CARHR055710 Cardamine hirsuta HOM05D008727 ORTHO05D011379 2.6e-29 132.9 177 44.1
BcaC06g34301 Brassica carinata HOM05D008727 ORTHO05D011379 1.3e-25 120.6 138 48.6
Carub.0008s0089 Capsella rubella HOM05D001445 ORTHO05D001261 3.4e-21 105.9 180 39.4
AL8G11310 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 3.7e-20 102.4 180 38.9
AL8G11340 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 1.6e-18 97.1 180 35.6
Aa31LG9G5990 Aethionema arabicum HOM05D001445 ORTHO05D001261 3.5e-18 95.9 172 38.4
Aa31sc241G40 Aethionema arabicum HOM05D001445 ORTHO05D001261 7.8e-18 94.7 180 35.6
AT5G46930 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 7.8e-18 94.7 180 36.7
Aa31sc241G60 Aethionema arabicum HOM05D001445 ORTHO05D001261 1.3e-17 94.0 180 35.6
CARHR174500 Cardamine hirsuta HOM05D001445 ORTHO05D001261 6.6e-17 91.7 179 35.8
Sp2g11760 Schrenkiella parvula HOM05D001445 ORTHO05D001261 6.6e-17 91.7 180 36.7
AL8G11330 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 1.1e-16 90.9 179 35.8
Thhalv10001100m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 1.1e-16 90.9 180 36.1
Sp2g11720 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.9e-16 90.1 180 35.0
Carub.0008s0091 Capsella rubella HOM05D001445 ORTHO05D001261 4.3e-16 89.0 178 36.0
AT5G46940 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 5.6e-16 88.6 179 36.3
Carub.0008s0092 Capsella rubella HOM05D001445 ORTHO05D001261 5.6e-16 88.6 180 34.4
Sp2g11740 Schrenkiella parvula HOM05D001445 ORTHO05D001261 5.6e-16 88.6 179 34.6
AT5G46970 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 7.3e-16 88.2 172 36.6
AL8G11300 Arabidopsis lyrata HOM05D008727 ORTHO05D011379 4.7e-15 85.5 134 40.3
Carub.0008s0090 Capsella rubella HOM05D001445 ORTHO05D001261 4.7e-15 85.5 178 35.4
C02p48090 Brassica napus HOM05D001445 ORTHO05D001261 1.1e-14 84.3 182 34.1
BolC2t10840H Brassica oleracea HOM05D001445 ORTHO05D001261 1.1e-14 84.3 182 34.1
A02p30560 Brassica napus HOM05D001445 ORTHO05D001261 3.1e-14 82.8 180 34.4
BcaB07g30808 Brassica carinata HOM05D001445 ORTHO05D001261 4.0e-14 82.4 179 34.6
Thhalv10001105m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 5.2e-14 82.0 179 34.6
Thhalv10001199m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 1.2e-13 80.9 179 34.6
C03p62420 Brassica napus HOM05D001445 ORTHO05D001261 2.6e-13 79.7 179 33.0
BolC3t18500H Brassica oleracea HOM05D001445 ORTHO05D001261 2.6e-13 79.7 179 33.5
CARHR174480 Cardamine hirsuta HOM05D001445 ORTHO05D001261 4.4e-13 79.0 161 35.4
A02p30180 Brassica napus HOM05D001445 ORTHO05D001261 1.7e-12 77.0 179 33.5
BraA02t08034Z Brassica rapa HOM05D001445 ORTHO05D001261 2.2e-12 76.6 179 33.5
CANSAT21G0328 Cannabis sativa HOM05D001445 ORTHO05D001261 2.9e-12 76.3 165 30.9
Sp2g11750 Schrenkiella parvula HOM05D001445 ORTHO05D001261 8.4e-12 74.7 176 32.4
BcaB01g05448 Brassica carinata HOM05D001445 ORTHO05D001261 1.1e-11 74.3 178 29.8
TWI15G1112 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 1.1e-11 74.3 188 29.3
A02p30590 Brassica napus HOM05D001445 ORTHO05D001261 2.4e-11 73.2 179 31.3
BraA02t08076Z Brassica rapa HOM05D001445 ORTHO05D001261 3.2e-11 72.8 181 33.1
BolC7t43597H Brassica oleracea HOM05D008727 ORTHO05D040202 4.1e-11 72.4 58 60.3
BraA02t08073Z Brassica rapa HOM05D001445 ORTHO05D001261 4.1e-11 72.4 180 33.3
Prupe.5G048900 Prunus persica HOM05D001445 ORTHO05D001261 5.4e-11 72.0 176 28.4
A02p30580 Brassica napus HOM05D001445 ORTHO05D001261 7.1e-11 71.6 181 33.1
MELO3C003367.2 Cucumis melo HOM05D001445 ORTHO05D001261 7.1e-11 71.6 176 28.4
COL.COLO4_17127 Corchorus olitorius HOM05D001445 ORTHO05D001261 1.6e-10 70.5 182 29.1
Duzib205G0415 Durio zibethinus HOM05D001445 ORTHO05D001261 2.7e-10 69.7 164 31.1
BcaC03g16906 Brassica carinata HOM05D001445 ORTHO05D001261 3.5e-10 69.3 174 32.2
BcaC06g31448 Brassica carinata HOM05D001445 ORTHO05D001261 3.5e-10 69.3 179 29.6
AL8G11320 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 6.0e-10 68.6 185 29.2
C07p30580 Brassica napus HOM05D008727 ORTHO05D040202 6.0e-10 68.6 53 62.3
Sp2g11730 Schrenkiella parvula HOM05D001445 ORTHO05D001261 6.0e-10 68.6 179 31.3
MD06G1042400 Malus domestica HOM05D001445 ORTHO05D001261 1.0e-09 67.8 178 28.7
BcaB07g30804 Brassica carinata HOM05D001445 ORTHO05D001261 1.7e-09 67.0 182 31.3
COL.COLO4_17126 Corchorus olitorius HOM05D001445 ORTHO05D001261 3.3e-08 62.8 182 28.6
Thecc.01G402600 Theobroma cacao HOM05D001445 ORTHO05D001261 5.6e-08 62.0 182 25.8
PSO782G4131 Papaver somniferum HOM05D001445 ORTHO05D001261 3.6e-07 59.3 157 28.7
BcaB08g36203 Brassica carinata HOM05D001445 ORTHO05D001261 4.7e-07 58.9 179 30.2
A09p22680 Brassica napus HOM05D001445 ORTHO05D001261 4.7e-07 58.9 182 30.2
Prupe.5G048600 Prunus persica HOM05D001445 ORTHO05D001261 4.7e-07 58.9 158 29.1
QL04p026153 Quercus lobata HOM05D001445 ORTHO05D001261 4.7e-07 58.9 177 26.0
C09p29170 Brassica napus HOM05D001445 ORTHO05D001261 1.1e-06 57.8 182 28.6
BraA09t37873Z Brassica rapa HOM05D001445 ORTHO05D001261 1.4e-06 57.4 182 28.6
Duzib133G0634 Durio zibethinus HOM05D001445 ORTHO05D001261 1.4e-06 57.4 182 24.7
CARHR174490 Cardamine hirsuta HOM05D001445 ORTHO05D001261 1.8e-06 57.0 166 27.7
BcaC04g21667 Brassica carinata HOM05D001445 ORTHO05D001261 3.1e-06 56.2 179 28.5
BolC9t55774H Brassica oleracea HOM05D001445 ORTHO05D001261 3.1e-06 56.2 182 28.0
TAR375G0630 Trochodendron aralioides HOM05D001445 ORTHO05D001261 5.2e-06 55.5 132 28.8


User provided reference genes

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