Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p30370 Brassica napus HOM05D000220 ORTHO05D000141 1.8e-20 101.7 52 100.0
BolC7t43575H Brassica oleracea HOM05D000220 ORTHO05D000141 1.1e-14 82.4 43 97.7
BcaC06g34311 Brassica carinata HOM05D000220 ORTHO05D000141 2.2e-10 68.2 69 60.9
BcaC06g34313 Brassica carinata HOM05D000220 ORTHO05D000141 2.2e-10 68.2 69 60.9
BcaC06g34314 Brassica carinata HOM05D000220 ORTHO05D000141 2.2e-10 68.2 69 60.9
BcaC06g34316 Brassica carinata HOM05D000220 ORTHO05D000141 2.2e-10 68.2 69 60.9
BcaC06g34317 Brassica carinata HOM05D000220 ORTHO05D000141 2.2e-10 68.2 69 60.9
BcaC06g34318 Brassica carinata HOM05D000220 ORTHO05D000141 2.2e-10 68.2 69 60.9
BcaC06g34319 Brassica carinata HOM05D000220 ORTHO05D000141 2.2e-10 68.2 69 60.9
BcaC06g34321 Brassica carinata HOM05D000220 ORTHO05D000141 2.2e-10 68.2 69 60.9
BcaC06g34322 Brassica carinata HOM05D000220 ORTHO05D000141 2.2e-10 68.2 69 60.9
C07p30350 Brassica napus HOM05D000220 ORTHO05D000141 2.2e-10 68.2 69 60.9
C07p30410 Brassica napus HOM05D000220 ORTHO05D000141 2.2e-10 68.2 69 60.9
C07p30460 Brassica napus HOM05D000220 ORTHO05D000141 2.2e-10 68.2 69 60.9
BcaC06g34310 Brassica carinata HOM05D000220 ORTHO05D000141 4.8e-10 67.0 69 59.4
BraA06t27420Z Brassica rapa HOM05D000220 ORTHO05D000141 4.8e-10 67.0 69 59.4
C07p30360 Brassica napus HOM05D000220 ORTHO05D000141 6.3e-10 66.6 69 59.4
BolC7t43580H Brassica oleracea HOM05D000220 ORTHO05D000141 1.1e-09 65.9 69 59.4
BcaC06g34327 Brassica carinata HOM05D000220 ORTHO05D000141 1.4e-09 65.5 69 58.0
BcaC06g34323 Brassica carinata HOM05D000220 ORTHO05D000141 1.8e-09 65.1 69 59.4
C07p30330 Brassica napus HOM05D000220 ORTHO05D000141 1.8e-09 65.1 69 59.4
BraA06t27416Z Brassica rapa HOM05D000220 ORTHO05D000141 2.4e-09 64.7 69 58.0
BraA06t27417Z Brassica rapa HOM05D000220 ORTHO05D000141 2.4e-09 64.7 69 58.0
BraA06t27419Z Brassica rapa HOM05D000220 ORTHO05D000141 2.4e-09 64.7 69 58.0
BolC7t43577H Brassica oleracea HOM05D000220 ORTHO05D000141 1.2e-08 62.4 30 96.7
C07p30390 Brassica napus HOM05D000220 ORTHO05D000141 4.5e-08 60.5 34 85.3
BraA06t27418Z Brassica rapa HOM05D000220 ORTHO05D000141 4.5e-08 60.5 69 56.5
C07p30450 Brassica napus HOM05D000220 ORTHO05D000141 2.2e-07 58.2 60 61.7
BolC7t43585H Brassica oleracea HOM05D000220 ORTHO05D000141 2.2e-07 58.2 60 61.7
BolC7t43586H Brassica oleracea HOM05D000220 ORTHO05D000141 2.2e-07 58.2 60 61.7
SpUn0312_0010 Schrenkiella parvula HOM05D000220 ORTHO05D000141 3.8e-07 57.4 33 81.8
Sp2g11690 Schrenkiella parvula HOM05D000220 ORTHO05D000141 5.0e-07 57.0 34 82.4
AL8G11390 Arabidopsis lyrata HOM05D000220 ORTHO05D000141 6.5e-07 56.6 34 82.4
Thhalv10001071m.g Eutrema salsugineum HOM05D000220 ORTHO05D000141 8.5e-07 56.2 34 82.4
SpUn0312_0020 Schrenkiella parvula HOM05D000220 ORTHO05D000141 1.5e-06 55.5 33 78.8
BcaB07g30806 Brassica carinata HOM05D000220 ORTHO05D000141 1.9e-06 55.1 33 78.8
BcaB07g30807 Brassica carinata HOM05D000220 ORTHO05D000141 1.9e-06 55.1 33 78.8
AT5G46900 Arabidopsis thaliana HOM05D000220 ORTHO05D000141 2.5e-06 54.7 34 79.4
Sp7g04990 Schrenkiella parvula HOM05D000220 ORTHO05D000141 2.5e-06 54.7 33 75.8
Thhalv10001072m.g Eutrema salsugineum HOM05D000220 ORTHO05D000141 3.2e-06 54.3 34 79.4
AT5G46890 Arabidopsis thaliana HOM05D000220 ORTHO05D000141 5.5e-06 53.5 34 76.5
BcaB07g30811 Brassica carinata HOM05D000220 ORTHO05D000141 7.2e-06 53.1 33 75.8
BcaC04g21672 Brassica carinata HOM05D000220 ORTHO05D000141 7.2e-06 53.1 33 75.8
A09p22650 Brassica napus HOM05D000220 ORTHO05D000141 7.2e-06 53.1 33 75.8
A09p22660 Brassica napus HOM05D000220 ORTHO05D000141 7.2e-06 53.1 33 75.8
C09p29110 Brassica napus HOM05D000220 ORTHO05D000141 7.2e-06 53.1 33 75.8
BolC9t55771H Brassica oleracea HOM05D000220 ORTHO05D000141 7.2e-06 53.1 33 75.8
BraA09t37870Z Brassica rapa HOM05D000220 ORTHO05D000141 7.2e-06 53.1 33 75.8
BraA09t37871Z Brassica rapa HOM05D000220 ORTHO05D000141 7.2e-06 53.1 33 75.8
Carub.0008s0094 Capsella rubella HOM05D000220 ORTHO05D000141 7.2e-06 53.1 34 76.5
CARHR174530 Cardamine hirsuta HOM05D000220 ORTHO05D000141 7.2e-06 53.1 34 76.5


User provided reference genes

Program Settings