Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 6.0e-222 773.9 386 100.0
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 2.1e-206 722.2 386 93.3
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 7.3e-204 713.8 386 92.5
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 1.2e-201 706.4 386 92.2
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 4.4e-201 704.5 386 91.7
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 3.0e-197 691.8 386 89.4
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 2.3e-165 585.9 382 77.2
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 4.1e-162 575.1 388 75.3
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 2.1e-158 562.8 381 73.0
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 5.3e-146 521.5 316 82.3
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 6.7e-141 504.6 349 71.1
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 2.8e-139 499.2 386 64.5
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 6.8e-109 398.3 359 54.3
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 1.2e-108 397.5 334 56.6
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 2.0e-108 396.7 240 79.2
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 2.0e-108 396.7 362 54.1
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 4.4e-108 395.6 364 53.0
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 7.5e-108 394.8 339 55.8
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 4.9e-107 392.1 359 51.8
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 2.0e-105 386.7 367 53.1
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 2.0e-105 386.7 371 52.3
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 7.8e-105 384.8 366 53.6
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 5.6e-103 378.6 358 52.0
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 5.6e-103 378.6 364 53.6
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 7.3e-103 378.3 368 51.9
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 9.5e-103 377.9 362 50.6
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 2.1e-102 376.7 366 51.4
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 2.8e-102 376.3 367 52.3
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 3.6e-102 375.9 330 55.5
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 4.7e-102 375.6 329 55.0
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 6.2e-102 375.2 362 51.9
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 1.4e-101 374.0 363 50.1
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 3.4e-100 369.4 381 50.4
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 7.5e-100 368.2 330 54.2
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 9.9e-100 367.9 346 53.8
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 2.2e-99 366.7 361 51.2
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 2.2e-99 366.7 352 53.4
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 6.4e-99 365.2 373 50.4
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 8.3e-99 364.8 365 51.8
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 8.3e-99 364.8 381 48.0
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 1.4e-98 364.0 329 53.8
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 3.2e-98 362.8 369 49.3
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 7.1e-98 361.7 357 51.5
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 4.6e-97 359.0 370 49.2
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 4.6e-97 359.0 336 52.1
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 6.0e-97 358.6 370 49.2
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 1.0e-96 357.8 350 50.3
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 1.3e-96 357.5 350 52.3
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 1.7e-96 357.1 356 51.1
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 5.1e-96 355.5 381 47.5
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 8.6e-96 354.8 373 49.3
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 8.6e-96 354.8 395 45.3
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 8.6e-96 354.8 340 49.7
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 2.5e-95 353.2 351 51.6
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 4.7e-94 349.0 363 47.7
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 4.7e-94 349.0 386 46.4
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 2.4e-93 346.7 363 49.6
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 6.8e-93 345.1 373 47.7
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 1.5e-92 344.0 370 48.6
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 2.2e-91 340.1 363 48.8
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 1.4e-90 337.4 363 46.8
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 3.2e-90 336.3 335 49.9
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 4.1e-90 335.9 447 41.2
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 5.4e-90 335.5 365 46.6
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 6.0e-89 332.0 384 46.4
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 1.7e-88 330.5 348 47.7
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 1.7e-88 330.5 363 48.5
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 5.1e-88 328.9 364 45.6
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 6.6e-88 328.6 371 46.9
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.5e-87 327.4 274 55.5
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 5.6e-87 325.5 360 46.7
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 9.6e-87 324.7 366 45.6
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 1.4e-85 320.9 349 46.7
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 6.9e-85 318.5 349 45.3
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 4.4e-84 315.8 362 49.2
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 7.6e-84 315.1 383 46.2
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 1.3e-83 314.3 367 47.1
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 8.4e-83 311.6 353 47.3
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 1.4e-82 310.8 376 45.5
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 3.2e-82 309.7 382 43.7
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 2.1e-81 307.0 376 46.0
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 3.0e-80 303.1 354 45.8
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 2.4e-77 293.5 348 44.8
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 1.2e-76 291.2 360 44.4
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 6.4e-75 285.4 394 40.9
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 1.5e-71 274.2 338 44.1
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 1.6e-70 270.8 330 43.9
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 2.8e-70 270.0 231 55.4
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 1.4e-69 267.7 230 62.2
Zm00001eb000170 Zea mays HOM05D006624 ORTHO05D008209 1.3e-67 261.2 350 38.9
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 3.3e-63 246.5 469 31.8
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 1.6e-62 244.2 390 39.0
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 1.8e-61 240.7 259 46.3
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 1.7e-59 234.2 169 64.5
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 3.0e-56 223.4 277 44.8
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 2.4e-53 213.8 266 43.6
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 3.2e-50 203.4 358 35.5
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 7.9e-49 198.7 191 49.2
Mapoly0037s0054 Marchantia polymorpha HOM05D006624 ORTHO05D008209 1.0e-48 198.4 357 33.6
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 1.0e-48 198.4 314 35.4
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.8e-48 197.6 241 44.0
Hma1.2p1_3049F.1_g332130 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 2.3e-48 197.2 297 38.4
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 3.3e-47 193.4 180 48.9
Hma1.2p1_0414F.1_g147760 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 4.8e-38 162.9 158 51.9
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.1e-34 151.8 326 33.1
Hma1.2p1_3049F.1_g332131 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 2.1e-33 147.5 112 63.4
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 2.3e-32 144.1 246 31.3
Peaxi162Scf00084g00918 Petunia axillaris HOM05D006624 ORTHO05D008209 1.2e-25 121.7 129 48.8
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 2.3e-24 117.5 223 30.0
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 5.2e-24 116.3 129 41.9
Gorai.004G213700 Gossypium raimondii HOM05D006624 ORTHO05D008209 5.2e-24 116.3 244 32.0
arahy.Tifrunner.gnm1.ann1.PE2WYP Arachis hypogaea HOM05D006624 ORTHO05D008209 6.7e-24 115.9 189 38.1
Os03g0100050 Oryza sativa ssp. japonica HOM05D006624 ORTHO05D008209 1.1e-13 82.0 100 39.0
Gohir.D11G288800 Gossypium hirsutum HOM05D000724 ORTHO05D011687 3.1e-13 80.5 108 36.1
Gorai.001G079600 Gossypium raimondii HOM05D006624 ORTHO05D008209 7.0e-13 79.3 86 41.9
Gohir.D07G137350 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.7e-11 74.7 86 50.0
Gorai.007G312600 Gossypium raimondii HOM05D000724 ORTHO05D011687 2.9e-11 73.9 86 48.8
Gohir.D08G202425 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.8e-11 73.6 86 48.8
Gohir.D07G075451 Gossypium hirsutum HOM05D006624 ORTHO05D008209 6.6e-11 72.8 86 48.8
Gohir.D11G288766 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.1e-10 72.0 86 47.7
Gohir.D07G137300 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.2e-09 68.6 65 44.6
Gohir.D08G202450 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.6e-09 68.2 68 44.1
CBR_g30426 Chara braunii HOM05D006624 ORTHO05D008209 2.2e-06 57.8 53 45.3


User provided reference genes

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