Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p28780 Brassica napus HOM05D006968 ORTHO05D008748 2.2e-118 429.1 241 100.0
BcaC06g34413 Brassica carinata HOM05D006968 ORTHO05D008748 2.0e-111 406.0 228 100.0
BolC7t43414H Brassica oleracea HOM05D006968 ORTHO05D008748 1.6e-108 396.4 228 98.2
A06p46470 Brassica napus HOM05D006968 ORTHO05D008748 5.9e-103 377.9 228 93.9
BcaC06g31531 Brassica carinata HOM05D006968 ORTHO05D008748 1.1e-101 373.6 228 93.0
BraA06t27520Z Brassica rapa HOM05D006968 ORTHO05D008748 1.9e-101 372.9 228 92.5
Thhalv10001012m.g Eutrema salsugineum HOM05D006968 ORTHO05D008748 3.7e-97 358.6 228 90.4
AL8G12990 Arabidopsis lyrata HOM05D006968 ORTHO05D008748 2.0e-95 352.8 228 87.3
AT5G45660 Arabidopsis thaliana HOM05D006968 ORTHO05D008748 1.3e-94 350.1 228 86.4
CARHR176320 Cardamine hirsuta HOM05D006968 ORTHO05D008748 3.0e-94 349.0 228 86.8
Carub.0008s0235 Capsella rubella HOM05D006968 ORTHO05D008748 3.9e-94 348.6 228 86.8
Sp2g10550 Schrenkiella parvula HOM05D006968 ORTHO05D008748 1.3e-89 333.6 229 85.6
Aa31LG9G7390 Aethionema arabicum HOM05D006968 ORTHO05D008748 3.0e-78 295.8 228 71.5
THA.LOC104798448 Tarenaya hassleriana HOM05D006968 ORTHO05D008748 3.0e-62 242.7 226 60.6
Cpa.g.sc51.7 Carica papaya HOM05D006968 ORTHO05D008748 3.7e-44 182.6 219 45.2
COL.COLO4_22824 Corchorus olitorius HOM05D006968 ORTHO05D008748 1.4e-43 180.6 213 46.9
Manes.17G062400 Manihot esculenta HOM05D006968 ORTHO05D008748 1.8e-43 180.3 188 50.0
Potri.011G076600 Populus trichocarpa HOM05D006968 ORTHO05D008748 2.4e-43 179.9 192 51.0
Atru.chr10.1476 Acer truncatum HOM05D006968 ORTHO05D008748 3.1e-43 179.5 214 49.1
Eucgr.E02869 Eucalyptus grandis HOM05D006968 ORTHO05D008748 4.5e-42 175.6 187 50.3
CSS0042403 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 5.9e-42 175.3 186 52.2
CANSAT35G0299 Cannabis sativa HOM05D006968 ORTHO05D008748 5.9e-42 175.3 195 48.7
CiPaw.09G132600 Carya illinoinensis HOM05D006968 ORTHO05D008748 2.9e-41 172.9 209 46.4
CSS0021911 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 5.0e-41 172.2 186 51.6
Duzib192G0634 Durio zibethinus HOM05D006968 ORTHO05D008748 6.5e-41 171.8 214 50.0
Sabra11G0063700 Salix brachista HOM05D006968 ORTHO05D008748 8.5e-41 171.4 194 48.5
TWI73G0998 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 8.5e-41 171.4 183 47.5
MELO3C002693.2 Cucumis melo HOM05D006968 ORTHO05D008748 1.9e-40 170.2 217 46.5
CsaV3_1G032900 Cucumis sativus L. HOM05D006968 ORTHO05D008748 1.9e-40 170.2 201 47.8
Thecc.06G160300 Theobroma cacao HOM05D006968 ORTHO05D008748 1.9e-40 170.2 231 48.1
RcHm_v2.0_Chr5g0012541 Rosa chinensis HOM05D006968 ORTHO05D008748 2.5e-40 169.9 228 46.5
Cfa001060 Carpinus fangiana HOM05D006968 ORTHO05D008748 5.5e-40 168.7 220 44.1
FAN16G1632 Fragaria x ananassa HOM05D006968 ORTHO05D008748 7.2e-40 168.3 188 50.0
FvH4_3g06600 Fragaria vesca HOM05D006968 ORTHO05D008748 9.3e-40 167.9 188 49.5
FAN25G0438 Fragaria x ananassa HOM05D006968 ORTHO05D008748 9.3e-40 167.9 188 49.5
QL05p052638 Quercus lobata HOM05D006968 ORTHO05D008748 9.3e-40 167.9 204 45.6
Dinv32313 Davidia involucrata HOM05D006968 ORTHO05D008748 2.1e-39 166.8 215 43.3
ClCG03G007290 Citrullus lanatus HOM05D006968 ORTHO05D008748 1.0e-38 164.5 221 44.8
Sed0009046 Sechium edule HOM05D006968 ORTHO05D008748 1.0e-38 164.5 211 42.7
Gohir.D05G154800 Gossypium hirsutum HOM05D006968 ORTHO05D008748 1.8e-38 163.7 213 47.9
Haze_05452 Corylus avellana HOM05D006968 ORTHO05D008748 3.0e-38 162.9 225 43.1
Gohir.A05G152300 Gossypium hirsutum HOM05D006968 ORTHO05D008748 3.0e-38 162.9 213 48.4
FAN11G1072 Fragaria x ananassa HOM05D006968 ORTHO05D008748 8.7e-38 161.4 191 48.2
Gorai.009G159100 Gossypium raimondii HOM05D006968 ORTHO05D008748 1.5e-37 160.6 213 47.4
Lsat_1_v5_gn_0_21300 Lactuca sativa HOM05D006968 ORTHO05D008748 1.5e-37 160.6 212 44.3
PGR042G2565 Punica granatum HOM05D006968 ORTHO05D008748 1.5e-37 160.6 185 43.8
Nn3g20980 Nelumbo nucifera HOM05D006968 ORTHO05D008748 7.4e-37 158.3 210 44.3
QL05p052648 Quercus lobata HOM05D006968 ORTHO05D008748 7.4e-37 158.3 194 46.4
Glyma.13G222900 Glycine max HOM05D006968 ORTHO05D008748 1.3e-36 157.5 226 41.6
VMungo0540G1786 Vigna mungo HOM05D006968 ORTHO05D008748 8.2e-36 154.8 226 39.8
Rhsim02G0123400 Rhododendron simsii HOM05D006968 ORTHO05D008748 1.1e-35 154.5 216 42.1
SalBow8G1131 Salvia bowleyana HOM05D006968 ORTHO05D008748 1.1e-35 154.5 220 40.9
SalBow8G0548 Salvia bowleyana HOM05D006968 ORTHO05D008748 3.1e-35 152.9 220 40.5
MSTRG.16189 Avicennia marina HOM05D006968 ORTHO05D008748 6.9e-35 151.8 206 42.7
arahy.Tifrunner.gnm1.ann1.5H3RNB Arachis hypogaea HOM05D006968 ORTHO05D008748 9.0e-35 151.4 217 42.9
arahy.Tifrunner.gnm1.ann1.9V28L0 Arachis hypogaea HOM05D006968 ORTHO05D008748 9.0e-35 151.4 217 42.9
Hund21573 Selenicereus undatus HOM05D006968 ORTHO05D008748 9.0e-35 151.4 210 42.9
SGA_v2.0_scaffold1G00109 Striga asiatica HOM05D006968 ORTHO05D008748 2.0e-34 150.2 208 42.8
Oeu042433.1 Olea europaea HOM05D006968 ORTHO05D008748 2.6e-34 149.8 219 41.1
TAR627G0978 Trochodendron aralioides HOM05D006968 ORTHO05D008748 2.6e-34 149.8 185 45.4
Ciclev10016662m.g Citrus clementina HOM05D006968 ORTHO05D008748 3.4e-34 149.4 188 45.2
MD10G1270500 Malus domestica HOM05D006968 ORTHO05D008748 3.4e-34 149.4 214 42.1
Nitab4.5_0003913g0060 Nicotiana tabacum HOM05D006968 ORTHO05D008748 3.4e-34 149.4 210 40.5
DCAR_007922 Daucus carota HOM05D000065 ORTHO05D000162 4.5e-34 149.1 211 45.0
Nitab4.5_0010884g0010 Nicotiana tabacum HOM05D006968 ORTHO05D008748 5.9e-34 148.7 215 40.0
Prupe.4G071300 Prunus persica HOM05D006968 ORTHO05D008748 5.9e-34 148.7 216 43.1
CAN.G257.117 Capsicum annuum HOM05D006968 ORTHO05D008748 1.0e-33 147.9 222 39.6
Lj6g0008479 Lotus japonicus HOM05D006968 ORTHO05D008748 1.3e-33 147.5 219 41.1
Lj2A313T77 Lonicera japonica HOM05D006968 ORTHO05D008748 1.7e-33 147.1 223 41.7
Phvul.006G168900 Phaseolus vulgaris HOM05D006968 ORTHO05D008748 2.9e-33 146.4 226 38.1
Solyc02g071600.4 Solanum lycopersicum HOM05D006968 ORTHO05D008748 6.5e-33 145.2 216 38.4
MD00G1093500 Malus domestica HOM05D006968 ORTHO05D008748 5.5e-32 142.1 214 40.7
HanXRQChr02g0055391 Helianthus annuus HOM05D006968 ORTHO05D008748 1.6e-31 140.6 213 40.4
HanXRQChr02g0055401 Helianthus annuus HOM05D006968 ORTHO05D008748 6.1e-31 138.7 220 40.5
Sopen02g020620 Solanum pennellii HOM05D006968 ORTHO05D008748 1.0e-30 137.9 217 36.9
EL10Ac8g19830 Beta vulgaris HOM05D006968 ORTHO05D008748 2.3e-30 136.7 201 42.3
Psat1g192720 Pisum sativum HOM05D006968 ORTHO05D008748 5.1e-30 135.6 225 35.6
Sc05g0006720 Simmondsia chinensis HOM05D000065 ORTHO05D000162 6.7e-30 135.2 199 42.7
FAN12G2652 Fragaria x ananassa HOM05D006968 ORTHO05D008748 8.8e-30 134.8 182 44.0
PSO675G0867 Papaver somniferum HOM05D006968 ORTHO05D008748 1.5e-29 134.0 215 39.1
PSO541G0278 Papaver somniferum HOM05D006968 ORTHO05D008748 2.6e-29 133.3 215 39.5
unitig_748.g7643 Utricularia gibba HOM05D001519 ORTHO05D008748 2.6e-29 133.3 208 38.9
Lalb_Chr18g0055011 Lupinus albus HOM05D006968 ORTHO05D008748 4.4e-29 132.5 200 39.5
PGSC0003DMG400007245 Solanum tuberosum HOM05D006968 ORTHO05D008748 5.7e-29 132.1 221 39.4
Ah.02g125570 Amaranthus hybridus HOM05D006968 ORTHO05D008748 1.7e-28 130.6 211 37.4
FvH4_4g34020 Fragaria vesca HOM05D006968 ORTHO05D008748 1.7e-28 130.6 182 43.4
Ca_00496_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 2.2e-28 130.2 205 38.0
Ca_30235_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 2.2e-28 130.2 205 38.0
CiPaw.09G132700 Carya illinoinensis HOM05D006968 ORTHO05D008748 3.7e-28 129.4 289 33.6
Cc02_g16200 Coffea canephora HOM05D006968 ORTHO05D008748 6.3e-28 128.6 215 38.1
Medtr2g018105 Medicago truncatula HOM05D006968 ORTHO05D008748 6.3e-28 128.6 228 33.8
TPR.G4467 Trifolium pratense HOM05D006968 ORTHO05D008748 1.1e-27 127.9 203 35.5
Actinidia07663 Actinidia chinensis HOM05D006968 ORTHO05D008748 3.2e-24 116.3 111 54.1
HPP92_009092 Vanilla planifolia HOM05D006968 ORTHO05D008748 1.6e-23 114.0 221 36.2
AUR62027636 Chenopodium quinoa HOM05D006968 ORTHO05D008748 2.7e-23 113.2 177 37.3
Aqoxy1G01892 Aquilegia oxysepala HOM05D006968 ORTHO05D008748 1.8e-22 110.5 210 33.8
FAN22G0056 Fragaria x ananassa HOM05D006968 ORTHO05D008748 3.0e-22 109.8 228 36.4
CDE10G0144 Ceratophyllum demersum HOM05D000065 ORTHO05D008748 4.4e-21 105.9 164 38.4
ECA248G0802 Erigeron canadensis HOM05D006968 ORTHO05D008748 4.4e-21 105.9 108 47.2
SEGI_37019 Sequoiadendron giganteum HOM05D006968 ORTHO05D008748 6.3e-20 102.1 214 33.2
AUR62035842 Chenopodium quinoa HOM05D006968 ORTHO05D008748 2.4e-19 100.1 104 49.0
Migut.M00982 Erythranthe guttata HOM05D006968 ORTHO05D008748 2.4e-19 100.1 152 41.4
Lalb_Chr18g0055041 Lupinus albus HOM05D006968 ORTHO05D008748 2.0e-18 97.1 225 30.2
SGA_v2.0_scaffold18G08383 Striga asiatica HOM05D006968 ORTHO05D008748 3.5e-18 96.3 106 47.2
Actinidia39540 Actinidia chinensis HOM05D006968 ORTHO05D008748 7.7e-18 95.1 156 42.3
SGA_v2.0_scaffold273G46455 Striga asiatica HOM05D006968 ORTHO05D008748 2.9e-17 93.2 101 48.5
Lsat_1_v5_gn_1_112261 Lactuca sativa HOM05D006968 ORTHO05D008748 1.1e-16 91.3 87 50.6
Pp3c13_11400 Physcomitrium patens HOM05D006968 ORTHO05D008748 1.0e-14 84.7 207 30.0
GSVIVG01021311001 Vitis vinifera HOM05D006968 ORTHO05D008748 1.8e-14 84.0 87 49.4
Zm00001eb154290 Zea mays HOM05D006968 ORTHO05D008748 3.0e-14 83.2 217 33.6
Os01g0727900 Oryza sativa ssp. japonica HOM05D006968 ORTHO05D008748 7.5e-13 78.6 181 34.3
Zm00001eb045900 Zea mays HOM05D006968 ORTHO05D008748 1.8e-11 73.9 227 32.6
TWI53G1777 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 4.5e-10 69.3 102 40.2
ATR0737G097 Amborella trichopoda HOM05D006968 ORTHO05D008748 1.1e-08 64.7 134 30.6
ECA248G3047 Erigeron canadensis HOM05D006968 ORTHO05D008748 1.9e-08 63.9 131 32.8
Haze_05450 Corylus avellana HOM05D006968 ORTHO05D164033 7.2e-08 62.0 49 59.2
GSVIVG01021310001 Vitis vinifera HOM05D006968 ORTHO05D008748 9.4e-08 61.6 66 48.5
SGA_v2.0_scaffold305G47958 Striga asiatica HOM05D000046 ORTHO05D405780 2.7e-07 60.1 56 50.0
SGA_v2.0_scaffold36G14429 Striga asiatica HOM05D003154 ORTHO05D003565 8.0e-07 58.5 66 45.5


User provided reference genes

Program Settings