Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p27650 Brassica napus HOM05D000083 ORTHO05D009678 6.8e-66 253.8 127 100.0
C07p27660 Brassica napus HOM05D000083 ORTHO05D009678 1.1e-55 219.9 108 100.0
C07p27640 Brassica napus HOM05D000083 ORTHO05D009678 9.2e-55 216.9 108 99.1
BcaC06g34512 Brassica carinata HOM05D000083 ORTHO05D009678 6.0e-54 214.2 108 98.1
BcaC06g34515 Brassica carinata HOM05D000083 ORTHO05D009678 6.0e-54 214.2 108 98.1
BolC7t43299H Brassica oleracea HOM05D000083 ORTHO05D009678 3.3e-52 208.4 105 98.1
C07p27680 Brassica napus HOM05D000083 ORTHO05D009678 2.1e-51 205.7 100 100.0
A06p46960 Brassica napus HOM05D000083 ORTHO05D009678 3.1e-50 201.8 105 94.3
BcaC06g34517 Brassica carinata HOM05D000083 ORTHO05D009678 4.0e-50 201.4 110 92.7
C07p27630 Brassica napus HOM05D000083 ORTHO05D009678 1.7e-48 196.1 106 92.5
BraA06t27570Z Brassica rapa HOM05D000083 ORTHO05D009678 2.9e-48 195.3 116 85.3
BolC7t43298H Brassica oleracea HOM05D000083 ORTHO05D009678 4.9e-48 194.5 106 92.5
BolC7t43296H Brassica oleracea HOM05D000083 ORTHO05D009678 1.6e-46 189.5 108 89.8
BcaC06g34518 Brassica carinata HOM05D000083 ORTHO05D009678 1.1e-44 183.3 110 87.3
BraA06t27569Z Brassica rapa HOM05D000083 ORTHO05D009678 5.4e-39 164.5 83 95.2
A06p46980 Brassica napus HOM05D000083 ORTHO05D009678 1.6e-38 162.9 83 94.0
BolC7t43290H Brassica oleracea HOM05D000083 ORTHO05D009678 1.0e-37 160.2 81 95.1
BcaB07g30931 Brassica carinata HOM05D000083 ORTHO05D009678 3.1e-34 148.7 108 70.4
BcaB07g30932 Brassica carinata HOM05D000083 ORTHO05D009678 1.2e-33 146.7 108 69.4
BcaB07g30936 Brassica carinata HOM05D000083 ORTHO05D009678 2.6e-33 145.6 108 68.5
BcaB07g30933 Brassica carinata HOM05D000083 ORTHO05D009678 7.6e-33 144.1 108 67.6
BcaB07g30934 Brassica carinata HOM05D000083 ORTHO05D009678 1.3e-32 143.3 108 67.6
A09p21260 Brassica napus HOM05D000083 ORTHO05D009678 2.2e-32 142.5 104 71.2
BraA09t37731Z Brassica rapa HOM05D000083 ORTHO05D009678 1.6e-30 136.3 104 68.3
BcaC04g21822 Brassica carinata HOM05D000083 ORTHO05D009678 2.1e-30 136.0 108 63.9
A09p21250 Brassica napus HOM05D000083 ORTHO05D009678 2.1e-30 136.0 108 63.9
C09p27050 Brassica napus HOM05D000083 ORTHO05D009678 2.1e-30 136.0 108 63.9
BolC9t55588H Brassica oleracea HOM05D000083 ORTHO05D009678 2.1e-30 136.0 108 63.9
BraA09t37730Z Brassica rapa HOM05D000083 ORTHO05D009678 2.1e-30 136.0 108 63.9
C02p45320 Brassica napus HOM05D000083 ORTHO05D009678 3.9e-29 131.7 95 67.4
A02p28560 Brassica napus HOM05D000083 ORTHO05D009678 5.1e-29 131.3 95 68.4
A02p28600 Brassica napus HOM05D000083 ORTHO05D009678 5.1e-29 131.3 95 68.4
BraA02t07893Z Brassica rapa HOM05D000083 ORTHO05D009678 5.1e-29 131.3 95 68.4
BcaC06g31590 Brassica carinata HOM05D000083 ORTHO05D009678 9.6e-28 127.1 83 80.7
Thhalv10029430m.g Eutrema salsugineum HOM05D000083 ORTHO05D009678 1.3e-27 126.7 83 71.1
BolC2t10563H Brassica oleracea HOM05D000083 ORTHO05D009678 3.7e-27 125.2 81 74.1
Thhalv10029514m.g Eutrema salsugineum HOM05D000083 ORTHO05D009678 6.9e-26 120.9 83 66.3
BcaB07g30492 Brassica carinata HOM05D000083 ORTHO05D009678 2.3e-21 105.9 64 76.6
BcaB07g30497 Brassica carinata HOM05D000083 ORTHO05D009678 2.3e-21 105.9 64 76.6
BraA02t07897Z Brassica rapa HOM05D000083 ORTHO05D009678 2.3e-21 105.9 64 76.6
BcaB07g30499 Brassica carinata HOM05D000083 ORTHO05D009678 3.9e-21 105.1 64 75.0
BcaB07g30493 Brassica carinata HOM05D000083 ORTHO05D009678 5.1e-21 104.8 64 76.6
BcaB07g30494 Brassica carinata HOM05D000083 ORTHO05D009678 1.9e-20 102.8 64 75.0
BcaB07g30935 Brassica carinata HOM05D000083 ORTHO05D009678 2.5e-20 102.4 64 71.9
BcaB07g30495 Brassica carinata HOM05D000083 ORTHO05D009678 1.3e-19 100.1 64 73.4
BcaB07g30498 Brassica carinata HOM05D000083 ORTHO05D009678 1.3e-19 100.1 64 73.4
BcaB07g30500 Brassica carinata HOM05D000083 ORTHO05D009678 1.6e-19 99.8 64 73.4
A06p46970 Brassica napus HOM05D000083 ORTHO05D009678 2.8e-19 99.0 46 97.8
BcaC06g34523 Brassica carinata HOM05D000083 ORTHO05D009678 6.3e-19 97.8 46 97.8
BolC7t43295H Brassica oleracea HOM05D000083 ORTHO05D009678 6.3e-19 97.8 46 97.8
BolC7t43297H Brassica oleracea HOM05D000083 ORTHO05D009678 6.3e-19 97.8 46 97.8
C07p27570 Brassica napus HOM05D000083 ORTHO05D009678 1.4e-18 96.7 46 95.7
AL3G14810 Arabidopsis lyrata HOM05D000083 ORTHO05D009678 5.3e-18 94.7 88 54.5
Carub.0003s0387 Capsella rubella HOM05D000083 ORTHO05D009678 9.0e-18 94.0 95 51.6
Thhalv10017514m.g Eutrema salsugineum HOM05D000083 ORTHO05D009678 3.4e-17 92.0 94 52.1
Carub.0002s0413 Capsella rubella HOM05D000083 ORTHO05D009678 7.6e-17 90.9 88 52.3
BcaC03g16692 Brassica carinata HOM05D000083 ORTHO05D009678 1.7e-16 89.7 53 77.4
BcaC02g07320 Brassica carinata HOM05D000083 ORTHO05D009678 1.4e-15 86.7 81 55.6
C04p68400 Brassica napus HOM05D000083 ORTHO05D009678 1.4e-15 86.7 81 55.6
BolC4t28341H Brassica oleracea HOM05D000083 ORTHO05D009678 1.4e-15 86.7 81 55.6
Thhalv10012219m.g Eutrema salsugineum HOM05D000083 ORTHO05D009678 1.9e-15 86.3 81 53.1
Thhalv10017880m.g Eutrema salsugineum HOM05D000083 ORTHO05D009678 1.9e-15 86.3 94 48.9
A04p31010 Brassica napus HOM05D000083 ORTHO05D009678 2.5e-15 85.9 81 54.3
BraA04t18558Z Brassica rapa HOM05D000083 ORTHO05D009678 2.5e-15 85.9 81 54.3
BcaB06g29151 Brassica carinata HOM05D000083 ORTHO05D009678 3.2e-15 85.5 81 54.3
Carub.0009s0010 Capsella rubella HOM05D000083 ORTHO05D009678 5.5e-15 84.7 88 51.1
Thhalv10017889m.g Eutrema salsugineum HOM05D000083 ORTHO05D009678 7.2e-15 84.3 81 48.1
AT2G40560 Arabidopsis thaliana HOM05D000083 ORTHO05D009678 9.4e-15 84.0 90 53.3
Thhalv10017950m.g Eutrema salsugineum HOM05D000083 ORTHO05D009678 1.8e-13 79.7 94 48.9
Carub.0004s2283 Capsella rubella HOM05D000083 ORTHO05D009678 5.1e-13 78.2 90 53.3
Thhalv10017570m.g Eutrema salsugineum HOM05D000083 ORTHO05D009678 5.1e-13 78.2 89 46.1
Sp2g04290 Schrenkiella parvula HOM05D000083 ORTHO05D009678 1.1e-12 77.0 85 45.9
CARHR135700 Cardamine hirsuta HOM05D000083 ORTHO05D009678 2.5e-12 75.9 87 47.1
AT2G40500 Arabidopsis thaliana HOM05D000083 ORTHO05D009678 3.3e-12 75.5 115 42.6
Aa31sc300G40 Aethionema arabicum HOM05D000083 ORTHO05D009678 1.3e-11 73.6 81 48.1
AL4G38350 Arabidopsis lyrata HOM05D000083 ORTHO05D009678 8.2e-11 70.9 91 50.5
AL4G38410 Arabidopsis lyrata HOM05D000083 ORTHO05D009678 8.2e-11 70.9 91 50.5
Carub.0004s2287 Capsella rubella HOM05D000083 ORTHO05D009678 1.8e-10 69.7 86 51.2
Carub.0004s2276 Capsella rubella HOM05D000083 ORTHO05D009678 3.1e-10 68.9 90 47.8
Carub.0004s2285 Capsella rubella HOM05D000083 ORTHO05D009678 1.5e-09 66.6 88 43.2
AL4G38450 Arabidopsis lyrata HOM05D000083 ORTHO05D009678 7.7e-09 64.3 97 43.3
AL4G34420 Arabidopsis lyrata HOM05D000083 ORTHO05D009678 1.3e-08 63.5 93 39.8
BcaC02g11273 Brassica carinata HOM05D000083 ORTHO05D003406 1.6e-06 56.6 91 42.9
A05p13860 Brassica napus HOM05D000083 ORTHO05D003406 1.6e-06 56.6 88 43.2
BraA05t20322Z Brassica rapa HOM05D000083 ORTHO05D003406 1.6e-06 56.6 88 43.2
BcaNung04393 Brassica carinata HOM05D000083 ORTHO05D003406 3.6e-06 55.5 74 44.6
C04p18230 Brassica napus HOM05D000083 ORTHO05D003406 3.6e-06 55.5 91 42.9
BolC4t23380H Brassica oleracea HOM05D000083 ORTHO05D003406 3.6e-06 55.5 91 42.9
Sp4g24500 Schrenkiella parvula HOM05D000083 ORTHO05D003406 3.6e-06 55.5 110 39.1


User provided reference genes

Program Settings