Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p26620 Brassica napus HOM05D000112 ORTHO05D017602 1.7e-67 259.2 131 100.0
BolC7t43189H Brassica oleracea HOM05D000112 ORTHO05D010432 1.0e-56 223.4 116 97.4
A06p19980 Brassica napus HOM05D000112 ORTHO05D010432 2.4e-45 185.7 117 82.9
BraA06t25084Z Brassica rapa HOM05D000112 ORTHO05D010432 2.4e-45 185.7 117 82.9
BcaB02g07711 Brassica carinata HOM05D000112 ORTHO05D010432 2.0e-44 182.6 116 82.8
BolC3t19489H Brassica oleracea HOM05D000112 ORTHO05D032741 9.9e-44 180.3 117 82.1
BcaC01g01791 Brassica carinata HOM05D000112 ORTHO05D010432 1.7e-43 179.5 117 80.3
BcaC06g31662 Brassica carinata HOM05D000112 ORTHO05D010432 1.4e-42 176.4 116 79.3
BcaC02g11532 Brassica carinata HOM05D000112 ORTHO05D010432 2.4e-42 175.6 116 76.7
BcaB06g27596 Brassica carinata HOM05D000112 ORTHO05D010432 3.2e-42 175.3 116 79.3
BcaC06g31537 Brassica carinata HOM05D000112 ORTHO05D010432 5.4e-42 174.5 116 77.6
A06p47260 Brassica napus HOM05D000112 ORTHO05D010432 7.1e-42 174.1 108 79.6
BolC7t43239H Brassica oleracea HOM05D000112 ORTHO05D010432 2.1e-41 172.6 108 79.6
BcaB04g18806 Brassica carinata HOM05D000112 ORTHO05D010432 6.0e-41 171.0 116 75.9
BolC3t19476H Brassica oleracea HOM05D000112 ORTHO05D010432 7.8e-41 170.6 131 73.3
BcaC06g34563 Brassica carinata HOM05D000112 ORTHO05D010432 1.1e-39 166.8 108 77.8
C07p27100 Brassica napus HOM05D000112 ORTHO05D010432 1.1e-39 166.8 108 77.8
C04p14280 Brassica napus HOM05D000112 ORTHO05D010432 1.1e-37 160.2 108 75.9
C09p33860 Brassica napus HOM05D000112 ORTHO05D027428 2.6e-36 155.6 116 71.6
BolC9t56224H Brassica oleracea HOM05D000112 ORTHO05D027428 2.6e-36 155.6 116 71.6
BolC4t23014H Brassica oleracea HOM05D000112 ORTHO05D010432 2.9e-35 152.1 122 65.6
BcaB04g18060 Brassica carinata HOM05D000112 ORTHO05D010432 7.9e-33 144.1 107 72.0
BcaC04g21248 Brassica carinata HOM05D000112 ORTHO05D027428 5.1e-32 141.4 108 71.3
BcaB01g01712 Brassica carinata HOM05D000112 ORTHO05D010432 8.7e-32 140.6 101 71.3
BcaC01g01782 Brassica carinata HOM05D000112 ORTHO05D032741 9.6e-31 137.1 87 80.5
C03p71920 Brassica napus HOM05D000112 ORTHO05D032741 9.6e-31 137.1 87 80.5
BcaC04g21197 Brassica carinata HOM05D000112 ORTHO05D010432 1.3e-30 136.7 108 67.6
BolC9t56285H Brassica oleracea HOM05D000112 ORTHO05D010432 1.3e-30 136.7 108 67.6
BcaB01g01710 Brassica carinata HOM05D000112 ORTHO05D010432 3.2e-26 122.1 103 62.1
C09p34410 Brassica napus HOM05D000112 ORTHO05D010432 9.3e-26 120.6 103 62.1
A09p19160 Brassica napus HOM05D000112 ORTHO05D010432 6.0e-25 117.9 84 73.8
BraA09t37534Z Brassica rapa HOM05D000112 ORTHO05D010432 6.0e-25 117.9 84 73.8
BcaC04g22041 Brassica carinata HOM05D000112 ORTHO05D010432 1.8e-24 116.3 84 72.6
C09p24170 Brassica napus HOM05D000112 ORTHO05D010432 1.8e-24 116.3 84 72.6
BolC9t55333H Brassica oleracea HOM05D000112 ORTHO05D010432 1.8e-24 116.3 84 72.6
Thhalv10029379m.g Eutrema salsugineum HOM05D000112 ORTHO05D010432 1.4e-21 106.7 150 46.7
BcaC06g34603 Brassica carinata HOM05D000112 ORTHO05D010432 1.5e-20 103.2 51 100.0
BraA09t38108Z Brassica rapa HOM05D000112 ORTHO05D010432 5.8e-20 101.3 125 51.2
BraA09t38112Z Brassica rapa HOM05D000112 ORTHO05D010432 1.0e-19 100.5 131 48.9
BcaC04g21395 Brassica carinata HOM05D000112 ORTHO05D010432 1.3e-19 100.1 114 50.9
A09p25320 Brassica napus HOM05D000112 ORTHO05D010432 1.7e-19 99.8 131 48.1
BolC9t53235H Brassica oleracea HOM05D000112 ORTHO05D010432 2.2e-19 99.4 118 48.3
BraA09t38109Z Brassica rapa HOM05D000112 ORTHO05D010432 2.2e-19 99.4 131 48.1
BraA09t35939Z Brassica rapa HOM05D000112 ORTHO05D010432 6.5e-19 97.8 112 50.0
BolC9t56077H Brassica oleracea HOM05D000112 ORTHO05D010432 1.1e-18 97.1 104 53.8
C09p03050 Brassica napus HOM05D000112 ORTHO05D010432 1.4e-18 96.7 118 46.6
A09p25270 Brassica napus HOM05D000112 ORTHO05D010432 3.2e-18 95.5 104 53.8
A09p25240 Brassica napus HOM05D000112 ORTHO05D010432 3.5e-17 92.0 104 51.9
A09p02960 Brassica napus HOM05D000112 ORTHO05D010432 6.0e-17 91.3 106 49.1
Thhalv10029161m.g Eutrema salsugineum HOM05D000112 ORTHO05D000564 6.0e-17 91.3 138 44.9
BraA09t38062Z Brassica rapa HOM05D000112 ORTHO05D010432 7.9e-17 90.9 116 47.4
A09p24770 Brassica napus HOM05D000112 ORTHO05D010432 1.0e-16 90.5 116 47.4
BcaC04g23943 Brassica carinata HOM05D000112 ORTHO05D010432 1.8e-16 89.7 106 48.1
C09p33430 Brassica napus HOM05D000112 ORTHO05D017602 2.3e-16 89.4 149 42.3
BolC9t56180H Brassica oleracea HOM05D000112 ORTHO05D017602 2.3e-16 89.4 149 42.3
Sp6g06600 Schrenkiella parvula HOM05D000112 ORTHO05D019361 1.9e-15 86.3 150 41.3
BcaB01g01926 Brassica carinata HOM05D000112 ORTHO05D010432 2.5e-15 85.9 106 49.1
BraA09t38201Z Brassica rapa HOM05D000112 ORTHO05D017602 4.3e-15 85.1 153 38.6
BcaC04g21296 Brassica carinata HOM05D000112 ORTHO05D017602 5.7e-15 84.7 116 44.0
AL3G50500 Arabidopsis lyrata HOM05D000112 ORTHO05D000564 1.6e-14 83.2 148 41.9
Thhalv10029399m.g Eutrema salsugineum HOM05D000112 ORTHO05D000564 6.3e-14 81.3 107 48.6
BcaB01g01925 Brassica carinata HOM05D000112 ORTHO05D010432 1.1e-13 80.5 106 47.2
C09p32280 Brassica napus HOM05D000112 ORTHO05D017602 2.4e-13 79.3 85 48.2
Sp4g04570 Schrenkiella parvula HOM05D000112 ORTHO05D017602 1.2e-12 77.0 123 40.7
Sp6g08230 Schrenkiella parvula HOM05D000112 ORTHO05D019361 3.4e-12 75.5 128 43.8
BolC9t56075H Brassica oleracea HOM05D000112 ORTHO05D017602 1.7e-11 73.2 66 54.5
AT1G34390 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 1.1e-10 70.5 148 39.2
Sp6g08360 Schrenkiella parvula HOM05D000112 ORTHO05D019361 2.5e-10 69.3 138 36.2
Sp6g08860 Schrenkiella parvula HOM05D000112 ORTHO05D019361 2.5e-10 69.3 153 36.6
AT1G35520 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 4.2e-10 68.6 148 39.2
BcaB01g01713 Brassica carinata HOM05D000112 ORTHO05D010432 5.5e-10 68.2 41 78.0
SpUn0752_0010 Schrenkiella parvula HOM05D000112 ORTHO05D019361 7.2e-10 67.8 153 35.9
AT1G34410 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 9.3e-10 67.4 148 38.5
Sp4g04480 Schrenkiella parvula HOM05D000112 ORTHO05D019361 1.6e-09 66.6 154 36.4
AL1G49840 Arabidopsis lyrata HOM05D000112 ORTHO05D000564 2.7e-09 65.9 149 38.9
AL1G51110 Arabidopsis lyrata HOM05D000112 ORTHO05D010432 4.6e-09 65.1 149 36.9
AL1G48670 Arabidopsis lyrata HOM05D000112 ORTHO05D000564 7.9e-09 64.3 150 37.3
AT1G35240 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 1.8e-08 63.2 143 38.5
AT1G35540 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 6.7e-08 61.2 148 35.8
AT1G34310 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 3.3e-07 58.9 148 37.2
AL1G48960 Arabidopsis lyrata HOM05D000112 ORTHO05D000564 9.7e-07 57.4 148 35.1
AT1G34170 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 1.3e-06 57.0 102 43.1


User provided reference genes

Program Settings