Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p26060 Brassica napus HOM05D003591 ORTHO05D014535 2.7e-52 208.4 103 100.0
BcaC02g11382 Brassica carinata HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
BcaC04g20349 Brassica carinata HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
BcaC06g34164 Brassica carinata HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
C02p32250 Brassica napus HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
C02p51040 Brassica napus HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
C04p36620 Brassica napus HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
C05p33180 Brassica napus HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
C05p35170 Brassica napus HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
C07p31990 Brassica napus HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
C09p28690 Brassica napus HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
BolC2t09405H Brassica oleracea HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
BolC4t25135H Brassica oleracea HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
BolC4t25466H Brassica oleracea HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
BolC4t27380H Brassica oleracea HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
BolC6t37339H Brassica oleracea HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
BolC9t57338H Brassica oleracea HOM05D003591 ORTHO05D005681 7.3e-34 147.1 76 97.4
BcaC02g10879 Brassica carinata HOM05D003591 ORTHO05D092259 1.6e-33 146.0 76 96.1
BcaC03g15229 Brassica carinata HOM05D003591 ORTHO05D003049 1.6e-33 146.0 76 96.1
C02p28120 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-33 146.0 76 96.1
BolC2t08856H Brassica oleracea HOM05D003591 ORTHO05D005681 1.6e-33 146.0 76 96.1
BcaC01g03288 Brassica carinata HOM05D003591 ORTHO05D005681 2.1e-33 145.6 76 96.1
BcaC02g09149 Brassica carinata HOM05D003591 ORTHO05D005681 2.1e-33 145.6 76 96.1
BcaC03g14809 Brassica carinata HOM05D003591 ORTHO05D005681 2.1e-33 145.6 76 96.1
C01p40950 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-33 145.6 76 96.1
C02p22600 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-33 145.6 76 96.1
C04p15980 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-33 145.6 76 94.7
C06p29690 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-33 145.6 76 96.1
C04p20950 Brassica napus HOM05D003591 ORTHO05D005681 2.8e-33 145.2 75 97.3
BolC5t32233H Brassica oleracea HOM05D003591 ORTHO05D005681 2.8e-33 145.2 76 96.1
C08p14230 Brassica napus HOM05D003591 ORTHO05D005681 3.6e-33 144.8 76 94.7
BolC2t08413H Brassica oleracea HOM05D003591 ORTHO05D005681 4.7e-33 144.4 76 94.7
C01p09530 Brassica napus HOM05D003591 ORTHO05D005681 6.2e-33 144.1 76 94.7
C02p09960 Brassica napus HOM05D003591 ORTHO05D005681 6.2e-33 144.1 76 94.7
BolC2t09403H Brassica oleracea HOM05D003591 ORTHO05D005681 6.2e-33 144.1 76 96.1
BolC3t20044H Brassica oleracea HOM05D003591 ORTHO05D005681 6.2e-33 144.1 76 96.1
C09p33370 Brassica napus HOM05D003591 ORTHO05D005681 8.1e-33 143.7 76 93.4
BolC3t15622H Brassica oleracea HOM05D003591 ORTHO05D005681 8.1e-33 143.7 76 94.7
BcaC06g34843 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-32 143.3 76 94.7
BolC7t42807H Brassica oleracea HOM05D003591 ORTHO05D005681 1.1e-32 143.3 76 94.7
BolC5t33482H Brassica oleracea HOM05D003591 ORTHO05D005681 1.4e-32 142.9 76 94.7
BcaC02g09819 Brassica carinata HOM05D003591 ORTHO05D005681 1.8e-32 142.5 76 93.4
C04p36250 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-32 142.5 76 93.4
BolC4t23171H Brassica oleracea HOM05D003591 ORTHO05D005681 1.8e-32 142.5 76 93.4
BolC4t25162H Brassica oleracea HOM05D003591 ORTHO05D005681 1.8e-32 142.5 76 93.4
BolC5t32448H Brassica oleracea HOM05D003591 ORTHO05D005681 2.3e-32 142.1 76 93.4
C02p34170 Brassica napus HOM05D003591 ORTHO05D005681 3.1e-32 141.7 76 93.4
BolC1t02629H Brassica oleracea HOM05D003591 ORTHO05D005681 4.0e-32 141.4 76 93.4
A08p14820 Brassica napus HOM05D003591 ORTHO05D005681 5.2e-32 141.0 96 75.0
BcaC02g10516 Brassica carinata HOM05D006890 ORTHO05D009907 8.9e-32 140.2 76 94.7
C04p28010 Brassica napus HOM05D003591 ORTHO05D005681 8.9e-32 140.2 76 94.7
BolC4t24345H Brassica oleracea HOM05D003591 ORTHO05D005681 8.9e-32 140.2 76 94.7
BcaC06g35756 Brassica carinata HOM05D003591 ORTHO05D090311 2.6e-31 138.7 76 92.1
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 2.6e-31 138.7 76 92.1
C03p87750 Brassica napus HOM05D003591 ORTHO05D005681 3.4e-31 138.3 76 94.7
C09p13180 Brassica napus HOM05D003591 ORTHO05D005681 4.4e-31 137.9 76 94.7
BolC9t54212H Brassica oleracea HOM05D003591 ORTHO05D005681 4.4e-31 137.9 76 94.7
BcaC09g49519 Brassica carinata HOM05D003591 ORTHO05D005681 2.9e-30 135.2 76 90.8
C07p25810 Brassica napus HOM05D003591 ORTHO05D005681 3.7e-30 134.8 76 92.1
BcaC02g09280 Brassica carinata HOM05D003591 ORTHO05D093581 6.4e-30 134.0 92 75.0
C05p37070 Brassica napus HOM05D003591 ORTHO05D005681 1.9e-29 132.5 83 84.3
BolC9t56172H Brassica oleracea HOM05D003591 ORTHO05D005681 3.2e-29 131.7 70 92.9
BcaC05g27725 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-28 129.4 81 82.7
BcaC03g15680 Brassica carinata HOM05D003591 ORTHO05D031965 7.8e-28 127.1 89 80.9
C04p57200 Brassica napus HOM05D003591 ORTHO05D005681 5.1e-27 124.4 65 96.9
C09p26480 Brassica napus HOM05D003591 ORTHO05D005681 5.1e-27 124.4 65 96.9
C09p39080 Brassica napus HOM05D003591 ORTHO05D005681 5.6e-26 120.9 65 95.4
BcaC03g14967 Brassica carinata HOM05D003591 ORTHO05D005681 2.1e-25 119.0 68 89.7
BcaB04g17486 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-24 116.7 76 77.6
BcaB01g01038 Brassica carinata HOM05D003591 ORTHO05D005681 2.6e-23 112.1 76 76.3
BcaC09g48473 Brassica carinata HOM05D003591 ORTHO05D092369 2.6e-23 112.1 86 68.6
BcaB08g35320 Brassica carinata HOM05D003591 ORTHO05D005681 5.8e-23 110.9 76 69.7
A01p28000 Brassica napus HOM05D003591 ORTHO05D005681 7.6e-23 110.5 79 74.7
A07p22590 Brassica napus HOM05D003591 ORTHO05D099096 9.9e-23 110.2 103 60.2
C07p21330 Brassica napus HOM05D003591 ORTHO05D005681 1.3e-22 109.8 60 95.0
A02p27490 Brassica napus HOM05D003591 ORTHO05D005681 1.7e-22 109.4 76 76.3
A06p32970 Brassica napus HOM05D003591 ORTHO05D005681 1.7e-22 109.4 76 76.3
BraA02t07580Z Brassica rapa HOM05D003591 ORTHO05D005681 1.7e-22 109.4 76 76.3
BraA02t07777Z Brassica rapa HOM05D003591 ORTHO05D005681 1.7e-22 109.4 76 76.3
BraA03t14847Z Brassica rapa HOM05D003591 ORTHO05D005681 1.7e-22 109.4 76 76.3
BraA06t26229Z Brassica rapa HOM05D003591 ORTHO05D005681 1.7e-22 109.4 76 76.3
BraA09t37347Z Brassica rapa HOM05D003591 ORTHO05D005681 1.7e-22 109.4 76 76.3
BraA09t38302Z Brassica rapa HOM05D003591 ORTHO05D005681 1.7e-22 109.4 76 76.3
BraA09t39581Z Brassica rapa HOM05D003591 ORTHO05D005681 1.7e-22 109.4 76 76.3
A07p03450 Brassica napus HOM05D003591 ORTHO05D005681 2.9e-22 108.6 76 75.0
BraA05t21769Z Brassica rapa HOM05D003591 ORTHO05D005681 2.9e-22 108.6 76 76.3
BraA09t37386Z Brassica rapa HOM05D003591 ORTHO05D005681 2.9e-22 108.6 76 76.3
A06p23350 Brassica napus HOM05D003591 ORTHO05D005681 3.8e-22 108.2 76 75.0
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 4.9e-22 107.8 76 68.4
A01p14520 Brassica napus HOM05D003591 ORTHO05D005681 4.9e-22 107.8 72 77.8
A03p63750 Brassica napus HOM05D003591 ORTHO05D103373 4.9e-22 107.8 72 77.8
A05p27760 Brassica napus HOM05D003591 ORTHO05D005681 4.9e-22 107.8 72 77.8
A06p27640 Brassica napus HOM05D003591 ORTHO05D005681 4.9e-22 107.8 72 77.8
A08p10960 Brassica napus HOM05D003591 ORTHO05D005681 4.9e-22 107.8 72 77.8
A09p29800 Brassica napus HOM05D003591 ORTHO05D099288 4.9e-22 107.8 72 77.8
A09p31710 Brassica napus HOM05D003591 ORTHO05D005681 4.9e-22 107.8 76 75.0
BraSC36t46030Z Brassica rapa HOM05D003591 ORTHO05D005681 4.9e-22 107.8 76 75.0
BcaB06g27013 Brassica carinata HOM05D003591 ORTHO05D005681 8.4e-22 107.1 76 69.7
BcaC02g09786 Brassica carinata HOM05D003591 ORTHO05D094424 1.1e-21 106.7 71 76.1
BraA06t25603Z Brassica rapa HOM05D003591 ORTHO05D005681 3.2e-21 105.1 76 75.0
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 5.4e-21 104.4 76 68.4
BcaB06g26933 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-20 103.2 76 67.1
BcaB03g16456 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-20 102.8 74 66.2
C01p26850 Brassica napus HOM05D003591 ORTHO05D014029 1.6e-20 102.8 55 90.9
BcaC09g50299 Brassica carinata HOM05D003591 ORTHO05D005681 3.5e-20 101.7 52 94.2
BcaB04g17038 Brassica carinata HOM05D003591 ORTHO05D005681 6.0e-20 100.9 76 67.1
BraA09t40594Z Brassica rapa HOM05D003591 ORTHO05D005681 6.0e-20 100.9 67 79.1
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 1.0e-19 100.1 76 64.5
BcaB02g10642 Brassica carinata HOM05D003591 ORTHO05D005681 3.0e-19 98.6 74 64.9
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 6.6e-19 97.4 76 63.2
BcaB04g17010 Brassica carinata HOM05D003591 ORTHO05D005681 8.7e-19 97.1 96 53.1
A01p33180 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-18 96.7 78 69.2
BcaB03g16169 Brassica carinata HOM05D003591 ORTHO05D005681 1.5e-18 96.3 74 63.5
BcaB03g16209 Brassica carinata HOM05D003591 ORTHO05D005681 7.3e-18 94.0 76 60.5
A03p57820 Brassica napus HOM05D003591 ORTHO05D005681 7.3e-18 94.0 69 73.9
C07p11480 Brassica napus HOM05D003591 ORTHO05D005681 7.3e-18 94.0 50 98.0
BcaB01g01500 Brassica carinata HOM05D003591 ORTHO05D005681 9.6e-18 93.6 67 68.7
C04p40830 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-17 92.8 56 89.3
A01p27630 Brassica napus HOM05D003591 ORTHO05D015527 8.1e-17 90.5 76 60.5
BcaB06g27093 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-16 90.1 74 59.5
A07p05580 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-16 90.1 70 71.4
BcaB04g17866 Brassica carinata HOM05D003591 ORTHO05D094092 1.4e-16 89.7 68 63.2
BcaB07g33061 Brassica carinata HOM05D003591 ORTHO05D005681 1.4e-16 89.7 76 61.8
BcaB03g16445 Brassica carinata HOM05D003591 ORTHO05D096213 1.8e-16 89.4 75 61.3
A10p07270 Brassica napus HOM05D003591 ORTHO05D015527 1.8e-16 89.4 76 59.2
A01p26630 Brassica napus HOM05D003591 ORTHO05D015527 2.4e-16 89.0 76 59.2
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 3.1e-16 88.6 76 60.5
BcaB03g16256 Brassica carinata HOM05D003591 ORTHO05D005681 3.1e-16 88.6 103 49.5
BcaB04g18233 Brassica carinata HOM05D003591 ORTHO05D005681 5.3e-16 87.8 76 59.2
BcaNung06545 Brassica carinata HOM05D003591 ORTHO05D005681 5.3e-16 87.8 70 65.7
A03p68610 Brassica napus HOM05D003591 ORTHO05D015527 5.3e-16 87.8 76 57.9
A05p29680 Brassica napus HOM05D003591 ORTHO05D015527 5.3e-16 87.8 76 57.9
A05p29690 Brassica napus HOM05D003591 ORTHO05D015527 5.3e-16 87.8 76 57.9
A09p31670 Brassica napus HOM05D003591 ORTHO05D015527 5.3e-16 87.8 76 57.9
BcaB08g35182 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-15 86.7 76 57.9
A03p66450 Brassica napus HOM05D003591 ORTHO05D015527 1.2e-15 86.7 76 57.9
A05p29440 Brassica napus HOM05D003591 ORTHO05D015527 1.2e-15 86.7 76 57.9
BcaB05g24453 Brassica carinata HOM05D003591 ORTHO05D093807 2.6e-15 85.5 74 56.8
BcaB01g01281 Brassica carinata HOM05D003591 ORTHO05D093295 5.8e-15 84.3 76 57.9
BcaB04g17785 Brassica carinata HOM05D003591 ORTHO05D094524 5.8e-15 84.3 74 60.8
BolC6t38533H Brassica oleracea HOM05D003591 ORTHO05D005681 7.6e-15 84.0 44 97.7
BcaB05g24452 Brassica carinata HOM05D003591 ORTHO05D005681 1.7e-14 82.8 76 55.3
BcaC03g14227 Brassica carinata HOM05D003591 ORTHO05D005681 1.7e-14 82.8 52 76.9
BcaB07g33402 Brassica carinata HOM05D003591 ORTHO05D005681 2.2e-14 82.4 76 57.9
BcaB02g11544 Brassica carinata HOM05D003591 ORTHO05D005681 3.8e-14 81.6 76 56.6
BcaC07g40267 Brassica carinata HOM05D003591 ORTHO05D005681 4.9e-14 81.3 52 75.0
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 8.4e-14 80.5 76 53.9
BolC8t47808H Brassica oleracea HOM05D003591 ORTHO05D005681 8.4e-14 80.5 45 95.6
BcaB07g33117 Brassica carinata HOM05D003591 ORTHO05D009907 1.4e-13 79.7 76 53.9
BraA08t33466Z Brassica rapa HOM05D012384 ORTHO05D014535 1.4e-13 79.7 72 56.9
BcaC07g37492 Brassica carinata HOM05D003591 ORTHO05D005681 2.4e-13 79.0 45 93.3
C09p43990 Brassica napus HOM05D003591 ORTHO05D005681 2.4e-13 79.0 76 57.9
BcaB07g33018 Brassica carinata HOM05D003591 ORTHO05D092282 4.2e-13 78.2 74 54.1
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-12 76.6 79 53.2
BolC4t25666H Brassica oleracea HOM05D003591 ORTHO05D005681 3.5e-12 75.1 45 91.1
BcaB04g19404 Brassica carinata HOM05D003591 ORTHO05D009907 3.0e-11 72.0 69 52.2
A09p40910 Brassica napus HOM05D003591 ORTHO05D099409 2.5e-10 68.9 46 78.3
BraA06t23871Z Brassica rapa HOM05D003591 ORTHO05D005681 2.5e-10 68.9 46 78.3
A06p20300 Brassica napus HOM05D003591 ORTHO05D005681 5.6e-10 67.8 46 76.1
BcaB04g17638 Brassica carinata HOM05D003591 ORTHO05D005681 7.3e-10 67.4 46 67.4
BNapus_Darmor_BZH_scaffold_103p00030 Brassica napus HOM05D003591 ORTHO05D015462 4.8e-09 64.7 48 64.6
BNapus_Darmor_BZH_scaffold_104p00030 Brassica napus HOM05D003591 ORTHO05D015462 4.8e-09 64.7 48 64.6
BraSC36t46101Z Brassica rapa HOM05D003591 ORTHO05D015462 4.8e-09 64.7 48 64.6
BcaB05g24917 Brassica carinata HOM05D003591 ORTHO05D005681 2.4e-08 62.4 43 69.8
C04p13460 Brassica napus HOM05D003591 ORTHO05D015462 4.0e-08 61.6 48 62.5
BcaB05g23044 Brassica carinata HOM05D003591 ORTHO05D005681 5.3e-08 61.2 50 62.0
A05p23340 Brassica napus HOM05D003591 ORTHO05D015527 6.9e-08 60.8 76 46.1
BraA03t15698Z Brassica rapa HOM05D003591 ORTHO05D015462 2.0e-07 59.3 48 60.4
BraA09t38695Z Brassica rapa HOM05D003591 ORTHO05D015462 2.0e-07 59.3 48 60.4
BolC1t04212H Brassica oleracea HOM05D012384 ORTHO05D014535 3.4e-07 58.5 27 92.6
A03p67750 Brassica napus HOM05D003591 ORTHO05D015462 5.8e-07 57.8 48 58.3
BraA07t28411Z Brassica rapa HOM05D003591 ORTHO05D015462 5.8e-07 57.8 48 58.3
BraSC36t46093Z Brassica rapa HOM05D003591 ORTHO05D015527 7.6e-07 57.4 47 59.6


User provided reference genes

Program Settings