Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p24930 Brassica napus HOM05D012520 ORTHO05D013638 9.1e-47 189.9 96 100.0
BcaC06g34755 Brassica carinata HOM05D012520 ORTHO05D013638 1.7e-45 185.7 96 96.9
BolC7t43022H Brassica oleracea HOM05D012520 ORTHO05D013638 1.7e-45 185.7 96 96.9
A07p17070 Brassica napus HOM05D012520 ORTHO05D013638 7.2e-44 180.3 96 94.8
BraA07t29434Z Brassica rapa HOM05D012520 ORTHO05D013638 7.2e-44 180.3 96 94.8
Sp2g29840 Schrenkiella parvula HOM05D012520 ORTHO05D013638 4.4e-33 144.4 96 78.1
C02p64740 Brassica napus HOM05D012520 ORTHO05D013638 4.7e-27 124.4 89 75.3
BcaC03g18397 Brassica carinata HOM05D012520 ORTHO05D013638 2.3e-26 122.1 96 71.9
BolC2t12536H Brassica oleracea HOM05D012520 ORTHO05D013638 8.9e-26 120.2 96 70.8
AL8G44590 Arabidopsis lyrata HOM05D012520 ORTHO05D013638 2.7e-22 108.6 91 69.2
CARHR280850 Cardamine hirsuta HOM05D012520 ORTHO05D013638 3.9e-21 104.8 96 64.6
A02p44350 Brassica napus HOM05D012520 ORTHO05D013638 2.0e-17 92.4 79 63.3
BraA02t09352Z Brassica rapa HOM05D012520 ORTHO05D013638 2.0e-17 92.4 79 63.3
Sc03g0001440 Simmondsia chinensis HOM05D012520 ORTHO05D013638 1.9e-07 59.3 94 40.4
COL.COLO4_11385 Corchorus olitorius HOM05D007434 ORTHO05D009541 9.3e-07 57.0 101 43.6
CANSAT01G1652 Cannabis sativa HOM05D007434 ORTHO05D009541 2.1e-06 55.8 94 37.2
Atru.chr3.395 Acer truncatum HOM05D007434 ORTHO05D013638 3.5e-06 55.1 105 37.1


User provided reference genes

Program Settings