Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p23960 Brassica napus HOM05D027993 ORTHO05D028290 4.8e-31 137.1 66 100.0
C06p40040 Brassica napus HOM05D027993 ORTHO05D028290 1.6e-29 132.1 67 97.0
BolC8t47389H Brassica oleracea HOM05D027993 ORTHO05D028290 1.0e-25 119.4 68 88.2
BolC8t47459H Brassica oleracea HOM05D027993 ORTHO05D028290 1.0e-25 119.4 68 88.2
AL1G24880 Arabidopsis lyrata HOM05D000799 ORTHO05D000629 9.8e-08 59.7 82 46.3
Carub.0001s1293 Capsella rubella HOM05D000799 ORTHO05D000629 9.8e-08 59.7 82 46.3
CARHR013570 Cardamine hirsuta HOM05D000799 ORTHO05D000629 9.8e-08 59.7 82 46.3
Thhalv10008511m.g Eutrema salsugineum HOM05D000799 ORTHO05D000629 9.8e-08 59.7 82 46.3
Sp1g11720 Schrenkiella parvula HOM05D000799 ORTHO05D000629 9.8e-08 59.7 82 46.3
AT1G13195 Arabidopsis thaliana HOM05D000799 ORTHO05D000629 2.9e-07 58.2 82 45.1
A06p08540 Brassica napus HOM05D000251 ORTHO05D000414 6.4e-07 57.0 82 43.9
A09p63230 Brassica napus HOM05D000799 ORTHO05D000629 6.4e-07 57.0 82 45.1
C05p10150 Brassica napus HOM05D000799 ORTHO05D000629 6.4e-07 57.0 82 43.9
BolC5t29761H Brassica oleracea HOM05D000799 ORTHO05D000629 6.4e-07 57.0 82 43.9
BraA06t24050Z Brassica rapa HOM05D000799 ORTHO05D000629 6.4e-07 57.0 82 43.9
BraA09t41675Z Brassica rapa HOM05D000799 ORTHO05D000629 6.4e-07 57.0 82 45.1
Aa31LG1G1600 Aethionema arabicum HOM05D000799 ORTHO05D000629 5.4e-06 53.9 70 48.6
BcaC05g25076 Brassica carinata HOM05D000799 ORTHO05D000629 5.4e-06 53.9 82 42.7


User provided reference genes

Program Settings