Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p22550 Brassica napus HOM05D008316 ORTHO05D005130 5.0e-90 334.3 159 100.0
BcaC06g34855 Brassica carinata HOM05D008316 ORTHO05D005130 9.7e-86 320.1 150 100.0
BcaC07g37291 Brassica carinata HOM05D008316 ORTHO05D005130 5.9e-83 310.8 159 94.3
C08p07230 Brassica napus HOM05D008316 ORTHO05D005130 5.9e-83 310.8 159 94.3
BcaC08g44739 Brassica carinata HOM05D008316 ORTHO05D005130 1.8e-79 299.3 150 94.0
C04p52530 Brassica napus HOM05D008316 ORTHO05D005130 4.8e-77 291.2 147 93.2
BcaB05g25144 Brassica carinata HOM05D008316 ORTHO05D005130 8.5e-74 280.4 151 88.1
BcaC02g09635 Brassica carinata HOM05D008316 ORTHO05D005130 1.5e-73 279.6 150 88.0
BcaC04g20935 Brassica carinata HOM05D008316 ORTHO05D005130 9.4e-65 250.4 129 89.1
BolC9t56608H Brassica oleracea HOM05D008316 ORTHO05D005130 9.4e-65 250.4 129 89.1
BolC5t32273H Brassica oleracea HOM05D003554 ORTHO05D005130 6.1e-64 247.7 163 74.2
BraA07t28446Z Brassica rapa HOM05D003554 ORTHO05D005130 1.0e-63 246.9 163 73.6
C06p00220 Brassica napus HOM05D003554 ORTHO05D005130 6.8e-63 244.2 163 73.6
BcaC09g49342 Brassica carinata HOM05D008316 ORTHO05D005130 2.0e-62 242.7 151 79.5
A07p06510 Brassica napus HOM05D003554 ORTHO05D005130 2.6e-62 242.3 163 73.0
BcaB02g06748 Brassica carinata HOM05D008316 ORTHO05D005130 6.6e-58 227.6 162 70.4
BraA09t38863Z Brassica rapa HOM05D008316 ORTHO05D005130 5.4e-52 208.0 104 91.3
BcaB07g32291 Brassica carinata HOM05D008316 ORTHO05D014956 2.3e-50 202.6 108 88.0
BcaB06g28040 Brassica carinata HOM05D008316 ORTHO05D005130 2.5e-49 199.1 132 68.9
BcaB05g21986 Brassica carinata HOM05D008316 ORTHO05D005130 7.3e-49 197.6 153 62.1
BcaB05g23532 Brassica carinata HOM05D008316 ORTHO05D005130 1.6e-48 196.4 132 66.7
Carub.0003s3367 Capsella rubella HOM05D003554 ORTHO05D005130 4.3e-33 145.2 157 48.4
Carub.0001s3566 Capsella rubella HOM05D003554 ORTHO05D005130 5.6e-33 144.8 157 49.0
Carub.0002s0984 Capsella rubella HOM05D003554 ORTHO05D005130 3.6e-32 142.1 157 47.8
Carub.0007s0014 Capsella rubella HOM05D003554 ORTHO05D005130 3.6e-32 142.1 157 47.8
Carub.0006s2609 Capsella rubella HOM05D003554 ORTHO05D005130 4.7e-32 141.7 157 47.8
Carub.0002s0983 Capsella rubella HOM05D003554 ORTHO05D005130 6.2e-32 141.4 131 52.7
Carub.0278s0001 Capsella rubella HOM05D003554 ORTHO05D005130 8.1e-32 141.0 144 49.3
Aa31LG6G9970 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.4e-31 140.2 154 46.8
BcaB08g35391 Brassica carinata HOM05D003554 ORTHO05D005130 4.0e-31 138.7 147 44.9
C03p67190 Brassica napus HOM05D003554 ORTHO05D005130 4.0e-31 138.7 104 71.2
BcaB01g04319 Brassica carinata HOM05D008316 ORTHO05D005130 5.2e-31 138.3 137 56.9
C02p31360 Brassica napus HOM05D009532 ORTHO05D005130 8.9e-31 137.5 108 63.9
Carub.0002s0995 Capsella rubella HOM05D003554 ORTHO05D005130 8.9e-31 137.5 146 47.3
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 3.4e-30 135.6 157 45.2
BcaB02g10640 Brassica carinata HOM05D003554 ORTHO05D005130 3.7e-29 132.1 132 47.7
Aa31LG10G9040 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.2e-28 129.0 158 43.7
BcaC08g42899 Brassica carinata HOM05D003554 ORTHO05D005130 5.4e-28 128.3 146 45.2
Aa31LG11G8070 Aethionema arabicum HOM05D003554 ORTHO05D005130 7.1e-28 127.9 153 43.1
Aa31LG7G10740 Aethionema arabicum HOM05D003554 ORTHO05D005130 7.1e-28 127.9 156 41.7
BNapus_Darmor_BZH_scaffold_167p00060 Brassica napus HOM05D003554 ORTHO05D005130 4.6e-27 125.2 153 43.8
BolC5t32025H Brassica oleracea HOM05D003554 ORTHO05D005130 6.0e-27 124.8 161 40.4
Aa31sc111G40 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.0e-26 124.0 158 41.8
Carub.0007s3074 Capsella rubella HOM05D003554 ORTHO05D005130 1.0e-26 124.0 136 45.6
BcaC07g37687 Brassica carinata HOM05D003554 ORTHO05D005130 2.3e-26 122.9 149 44.3
Aa31LG1G6440 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.0e-26 122.5 133 45.1
Aa31sc538G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.9e-26 122.1 151 43.7
Carub.0002s1016 Capsella rubella HOM05D003554 ORTHO05D005130 3.9e-26 122.1 128 47.7
BcaB04g17553 Brassica carinata HOM05D008316 ORTHO05D014956 5.1e-26 121.7 146 49.3
BcaB01g01146 Brassica carinata HOM05D003554 ORTHO05D005130 1.1e-25 120.6 169 38.5
Carub.0002s1014 Capsella rubella HOM05D003554 ORTHO05D005130 1.1e-25 120.6 152 43.4
Carub.0004s0685 Capsella rubella HOM05D003554 ORTHO05D005130 1.5e-25 120.2 136 44.1
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 3.3e-25 119.0 115 50.4
Aa31sc442G10 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.2e-24 117.1 106 52.8
BcaB04g17902 Brassica carinata HOM05D003554 ORTHO05D005130 2.8e-24 115.9 157 40.1
BcaB03g16118 Brassica carinata HOM05D003554 ORTHO05D005130 4.7e-24 115.2 157 40.1
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 8.1e-24 114.4 101 60.4
C05p06190 Brassica napus HOM05D003554 ORTHO05D005130 1.8e-23 113.2 138 44.9
Sp7g02635 Schrenkiella parvula HOM05D003554 ORTHO05D005130 3.1e-23 112.5 115 48.7
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 8.9e-23 110.9 152 42.1
BcaB01g02862 Brassica carinata HOM05D003554 ORTHO05D005130 1.2e-22 110.5 157 38.9
BcaB08g35337 Brassica carinata HOM05D003554 ORTHO05D005130 1.3e-21 107.1 156 39.1
BcaB07g31822 Brassica carinata HOM05D003554 ORTHO05D032345 8.4e-21 104.4 136 41.9
AL1G56530 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 1.1e-20 104.0 150 42.7
AL1G56540 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 1.1e-20 104.0 150 42.7
AT2G06420 Arabidopsis thaliana HOM05D003554 ORTHO05D005130 1.9e-20 103.2 132 43.2
C08p06800 Brassica napus HOM05D003554 ORTHO05D005130 2.4e-20 102.8 115 47.0
THA.LOC104803192 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.1e-18 95.1 152 37.5
THA.LOC104807807 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.1e-18 95.1 152 37.5
Thhalv10009333m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 1.1e-17 94.0 152 36.8
Thhalv10009650m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 2.5e-17 92.8 109 42.2
Thhalv10009514m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 5.6e-17 91.7 109 41.3
Thhalv10009683m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 5.6e-17 91.7 152 36.2
Thhalv10009941m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 9.6e-17 90.9 109 41.3
THA.LOC104811336 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.3e-16 90.5 152 36.2
THA.LOC104808464 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.8e-16 89.4 151 36.4
THA.LOC104822529 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.8e-16 88.6 151 36.4
Aa31LG5G24000 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.1e-15 87.4 91 51.6
THA.LOC104807874 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.1e-15 87.4 137 37.2
THA.LOC109116427 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.8e-15 86.7 146 37.0
THA.LOC104804766 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.0e-15 85.5 151 35.8
THA.LOC109117170 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.0e-15 85.5 137 35.8
Thhalv10009627m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 5.3e-15 85.1 109 39.4
BolC4t23182H Brassica oleracea HOM05D003554 ORTHO05D005130 9.0e-15 84.3 93 49.5
BolC3t19531H Brassica oleracea HOM05D003554 ORTHO05D005130 1.2e-14 84.0 76 52.6
Thhalv10009369m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 1.2e-14 84.0 152 34.9
Thhalv10009620m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 1.5e-14 83.6 142 35.9
Thhalv10009711m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 1.5e-14 83.6 99 40.4
CARHR213120 Cardamine hirsuta HOM05D003554 ORTHO05D005130 2.6e-14 82.8 70 52.9
THA.LOC104813280 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.6e-14 82.8 147 32.7
THA.LOC104810569 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.4e-14 82.4 147 32.0
THA.LOC109116390 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.4e-14 82.0 140 34.3
Aa31LG6G9990 Aethionema arabicum HOM05D003554 ORTHO05D005130 5.8e-14 81.6 158 32.9
BcaC05g27442 Brassica carinata HOM05D003554 ORTHO05D005130 5.8e-14 81.6 91 46.2
THA.LOC104804655 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.8e-14 81.6 149 32.9
CARHR034150 Cardamine hirsuta HOM05D003554 ORTHO05D005130 1.3e-13 80.5 105 41.9
Aa31LG6G10050 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.9e-13 79.3 93 48.4
THA.LOC104816074 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.9e-13 78.6 147 32.0
THA.LOC104820187 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.9e-13 78.6 147 32.0
THA.LOC109116563 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.9e-13 78.6 122 36.1
CARHR113350 Cardamine hirsuta HOM05D003554 ORTHO05D005130 8.4e-13 77.8 92 45.7
THA.LOC104815123 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.4e-12 77.0 123 31.7
THA.LOC104803467 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.4e-12 76.3 149 33.6
THA.LOC104825259 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.4e-12 76.3 151 31.8
THA.LOC104810514 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.2e-12 75.5 149 31.5
THA.LOC104798651 Tarenaya hassleriana HOM05D003554 ORTHO05D015748 1.6e-11 73.6 126 31.7
THA.LOC104809667 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.5e-11 72.4 142 30.3
CARHR049310 Cardamine hirsuta HOM05D003554 ORTHO05D005130 6.0e-11 71.6 90 44.4
THA.LOC104823081 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 6.0e-11 71.6 142 30.3
THA.LOC104798650 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 7.9e-11 71.2 142 29.6
Aa31sc471G30 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.7e-10 70.1 63 52.4
THA.LOC104810611 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.3e-10 69.7 150 29.3
THA.LOC104811332 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.3e-10 69.7 130 30.8
THA.LOC109116278 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.9e-10 68.9 130 30.8
THA.LOC104825824 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.7e-10 67.8 114 34.2
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 1.9e-09 66.6 45 60.0
BraA03t15707Z Brassica rapa HOM05D003554 ORTHO05D005130 1.9e-09 66.6 90 37.8
THA.LOC104798704 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.8e-08 62.8 85 41.2
THA.LOC104799670 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.8e-08 62.8 85 41.2
THA.LOC104803478 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.4e-07 60.5 112 36.6
THA.LOC104821602 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.4e-07 59.7 136 31.6
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 4.0e-07 58.9 46 58.7
THA.LOC104798881 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 9.9e-06 54.3 68 42.6


User provided reference genes

Program Settings