Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p22190 Brassica napus HOM05D007607 ORTHO05D009603 1.2e-62 243.4 170 100.0
BcaC06g34863 Brassica carinata HOM05D007607 ORTHO05D009603 2.3e-61 239.2 170 98.8
BolC7t42778H Brassica oleracea HOM05D007607 ORTHO05D009603 2.3e-61 239.2 170 98.8
A07p15130 Brassica napus HOM05D007607 ORTHO05D009603 1.3e-51 206.8 139 89.2
BcaB03g14267 Brassica carinata HOM05D007607 ORTHO05D009603 9.2e-50 200.7 133 91.0
BcaB07g32146 Brassica carinata HOM05D007607 ORTHO05D009603 9.2e-42 174.1 124 85.5
BraA06t24849Z Brassica rapa HOM05D007607 ORTHO05D009603 7.8e-41 171.0 123 87.0
A06p17530 Brassica napus HOM05D007607 ORTHO05D009603 3.0e-40 169.1 123 86.2
C05p20400 Brassica napus HOM05D007607 ORTHO05D009603 1.1e-39 167.2 123 85.4
BcaC05g26059 Brassica carinata HOM05D007607 ORTHO05D009603 9.5e-39 164.1 123 82.9
BolC5t30734H Brassica oleracea HOM05D007607 ORTHO05D009603 9.5e-39 164.1 123 82.9
Sp1g19030 Schrenkiella parvula HOM05D007607 ORTHO05D009603 1.6e-38 163.3 119 85.7
Thhalv10009074m.g Eutrema salsugineum HOM05D007607 ORTHO05D009603 8.9e-37 157.5 117 82.1
CARHR021860 Cardamine hirsuta HOM05D007607 ORTHO05D009603 1.3e-32 143.7 126 71.4
AL1G34640 Arabidopsis lyrata HOM05D007607 ORTHO05D009603 3.0e-32 142.5 124 75.0
Carub.0001s2092 Capsella rubella HOM05D007607 ORTHO05D009603 3.9e-32 142.1 127 70.9
AT1G21500 Arabidopsis thaliana HOM05D007607 ORTHO05D009603 1.9e-31 139.8 124 73.4
Aa31LG7G5390 Aethionema arabicum HOM05D007607 ORTHO05D009603 9.5e-31 137.5 123 73.2
THA.LOC104813690 Tarenaya hassleriana HOM05D007607 ORTHO05D009603 5.8e-20 101.7 123 60.2
Haze_01353 Corylus avellana HOM05D007607 ORTHO05D009603 4.9e-11 72.0 77 68.8
Cfa015274 Carpinus fangiana HOM05D007607 ORTHO05D009603 8.4e-11 71.2 77 55.8
Atru.chr4.1510 Acer truncatum HOM05D007607 ORTHO05D009603 1.1e-10 70.9 84 60.7
PGR142G0203 Punica granatum HOM05D007607 ORTHO05D009603 1.4e-10 70.5 86 60.5
Atru.chr4.1481 Acer truncatum HOM05D007607 ORTHO05D009603 1.9e-10 70.1 84 60.7
Gohir.A10G145500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 1.9e-10 70.1 133 46.6
Ciclev10022842m.g Citrus clementina HOM05D007607 ORTHO05D009603 2.4e-10 69.7 77 64.9
CANSAT56G1551 Cannabis sativa HOM05D007607 ORTHO05D009603 3.2e-10 69.3 77 63.6
QL10p057428 Quercus lobata HOM05D007607 ORTHO05D009603 7.1e-10 68.2 77 61.0
Dinv18311 Davidia involucrata HOM05D007607 ORTHO05D009603 9.3e-10 67.8 77 64.9
Gohir.D10G121500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 9.3e-10 67.8 133 45.9
Gorai.011G133600 Gossypium raimondii HOM05D007607 ORTHO05D009603 9.3e-10 67.8 133 45.9
Lj4g0023803 Lotus japonicus HOM05D007607 ORTHO05D009603 1.2e-09 67.4 141 41.1
Lalb_Chr16g0384371 Lupinus albus HOM05D007607 ORTHO05D009603 1.2e-09 67.4 84 58.3
Rhsim02G0085800 Rhododendron simsii HOM05D007607 ORTHO05D009603 1.2e-09 67.4 77 64.9
RhsimUnG0015300 Rhododendron simsii HOM05D007607 ORTHO05D009603 1.2e-09 67.4 77 64.9
CiPaw.01G169900 Carya illinoinensis HOM05D007607 ORTHO05D009603 1.6e-09 67.0 82 58.5
Peaxi162Scf00883g00099 Petunia axillaris HOM05D007607 ORTHO05D009603 2.1e-09 66.6 77 64.9
PSO017G0391 Papaver somniferum HOM05D007607 ORTHO05D009603 2.7e-09 66.2 77 54.5
Glyma.02G138600 Glycine max HOM05D007607 ORTHO05D009603 3.5e-09 65.9 75 64.0
Glyma.07G206400 Glycine max HOM05D007607 ORTHO05D009603 3.5e-09 65.9 86 57.0
PSO675G5570 Papaver somniferum HOM05D007607 ORTHO05D009603 3.5e-09 65.9 77 54.5
QL10p057723 Quercus lobata HOM05D007607 ORTHO05D009603 3.5e-09 65.9 77 62.3
Eucgr.H00285 Eucalyptus grandis HOM05D007607 ORTHO05D009603 4.6e-09 65.5 126 50.8
Ah.13g073390 Amaranthus hybridus HOM05D007607 ORTHO05D009603 6.0e-09 65.1 64 65.6
Prupe.7G267000 Prunus persica HOM05D007607 ORTHO05D009603 7.9e-09 64.7 89 59.6
MD02G1004100 Malus domestica HOM05D007607 ORTHO05D009603 1.0e-08 64.3 79 62.0
Actinidia28975 Actinidia chinensis HOM05D007607 ORTHO05D009603 1.8e-08 63.5 125 40.8
Manes.05G131900 Manihot esculenta HOM05D007607 ORTHO05D009603 1.8e-08 63.5 129 47.3
Duzib212G0637 Durio zibethinus HOM05D007607 ORTHO05D009603 2.3e-08 63.2 133 41.4
arahy.Tifrunner.gnm1.ann1.RJI6AK Arachis hypogaea HOM05D007607 ORTHO05D009603 3.0e-08 62.8 90 56.7
CAN.G1237.5 Capsicum annuum HOM05D007607 ORTHO05D009603 3.0e-08 62.8 82 57.3
CiPaw.02G100000 Carya illinoinensis HOM05D007607 ORTHO05D009603 3.0e-08 62.8 129 46.5
CSS0037895 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 3.9e-08 62.4 102 52.0
AUR62023773 Chenopodium quinoa HOM05D007607 ORTHO05D009603 3.9e-08 62.4 113 53.1
GSVIVG01038189001 Vitis vinifera HOM05D007607 ORTHO05D009603 5.1e-08 62.0 129 45.7
CSS0042213 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 8.7e-08 61.2 102 51.0
Potri.013G128700 Populus trichocarpa HOM05D007607 ORTHO05D009603 1.5e-07 60.5 127 44.1
Thecc.04G162800 Theobroma cacao HOM05D007607 ORTHO05D009603 1.5e-07 60.5 129 47.3
TWI15G0968 Tripterygium wilfordii HOM05D007607 ORTHO05D009603 1.5e-07 60.5 77 59.7
MBI10_g16327_MAGBIO Magnolia biondii HOM05D007607 ORTHO05D009603 1.9e-07 60.1 77 61.0
EL10Ac3g06110 Beta vulgaris HOM05D007607 ORTHO05D009603 2.5e-07 59.7 115 45.2
Solyc12g019550.2 Solanum lycopersicum HOM05D007607 ORTHO05D009603 2.5e-07 59.7 84 59.5
MD15G1147800 Malus domestica HOM05D007607 ORTHO05D009603 3.3e-07 59.3 80 60.0
Cc03_g14540 Coffea canephora HOM05D007607 ORTHO05D009603 4.3e-07 58.9 117 47.9
Sed0020904 Sechium edule HOM05D007607 ORTHO05D009603 4.3e-07 58.9 133 39.8
Aqoxy2G03795 Aquilegia oxysepala HOM05D007607 ORTHO05D009603 7.4e-07 58.2 88 54.5
MSTRG.22043 Avicennia marina HOM05D007607 ORTHO05D009603 7.4e-07 58.2 116 45.7
Cpa.g.sc343.4 Carica papaya HOM05D007607 ORTHO05D009603 7.4e-07 58.2 82 58.5
Sopen12g009810 Solanum pennellii HOM05D007607 ORTHO05D009603 7.4e-07 58.2 84 59.5
AUR62002416 Chenopodium quinoa HOM05D007607 ORTHO05D009603 9.6e-07 57.8 108 45.4
MSTRG.24562 Avicennia marina HOM05D007607 ORTHO05D009603 1.3e-06 57.4 79 57.0
HanXRQChr02g0059081 Helianthus annuus HOM05D007607 ORTHO05D009603 1.3e-06 57.4 122 50.8
Nitab4.5_0000575g0080 Nicotiana tabacum HOM05D007607 ORTHO05D009603 1.3e-06 57.4 83 60.2
TAR362G0213 Trochodendron aralioides HOM05D007607 ORTHO05D009603 1.3e-06 57.4 78 59.0
VMungo0251G2348 Vigna mungo HOM05D007607 ORTHO05D009603 1.3e-06 57.4 115 44.3
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 1.6e-06 57.0 78 46.2
Sc13g0006620 Simmondsia chinensis HOM05D007607 ORTHO05D009603 1.6e-06 57.0 120 40.8
Nitab4.5_0008331g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.1e-06 56.6 129 44.2
FvH4_1g00500 Fragaria vesca HOM05D007607 ORTHO05D009603 2.8e-06 56.2 78 60.3
Lsat_1_v5_gn_8_9141 Lactuca sativa HOM05D007607 ORTHO05D009603 2.8e-06 56.2 121 38.0
Psat7g119360 Pisum sativum HOM05D007607 ORTHO05D009603 2.8e-06 56.2 117 45.3
ECA233G0487 Erigeron canadensis HOM05D007607 ORTHO05D009603 3.7e-06 55.8 94 39.4
Hund12359 Selenicereus undatus HOM05D007607 ORTHO05D009603 4.8e-06 55.5 105 45.7
Zm00001eb318610 Zea mays HOM05D007607 ORTHO05D009603 6.2e-06 55.1 76 59.2


User provided reference genes

Program Settings