Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p22170 Brassica napus HOM05D000003 ORTHO05D012606 2.3e-40 168.3 76 100.0
BolC7t42780H Brassica oleracea HOM05D000003 ORTHO05D012606 2.3e-40 168.3 76 100.0
BraA05t20506Z Brassica rapa HOM05D000003 ORTHO05D000283 4.4e-28 127.5 75 73.3
AL5G31050 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 9.5e-15 83.2 74 45.9
A03p35460 Brassica napus HOM05D000003 ORTHO05D000283 8.1e-14 80.1 74 44.6
BraA03t12723Z Brassica rapa HOM05D000003 ORTHO05D000283 8.1e-14 80.1 74 44.6
AL5G25100 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 2.0e-12 75.5 72 50.0
AL4G12860 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 3.4e-12 74.7 72 47.2
BraA02t06952Z Brassica rapa HOM05D000003 ORTHO05D000283 5.8e-12 73.9 72 45.8
AL1G60290 Arabidopsis lyrata HOM05D064363 ORTHO05D000283 7.6e-12 73.6 72 45.8
BraA10t42734Z Brassica rapa HOM05D000003 ORTHO05D000283 2.9e-11 71.6 75 38.7
BolC9t58058H Brassica oleracea HOM05D000003 ORTHO05D000283 3.2e-10 68.2 72 43.1
BcaC07g38350 Brassica carinata HOM05D000003 ORTHO05D000283 4.1e-10 67.8 72 40.3
BcaC06g34861 Brassica carinata HOM05D012544 ORTHO05D012606 5.4e-10 67.4 31 90.3
AL2G10360 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.6e-09 65.9 65 41.5
BcaC05g27859 Brassica carinata HOM05D000003 ORTHO05D000283 2.1e-09 65.5 75 38.7
BolC5t32594H Brassica oleracea HOM05D000003 ORTHO05D000283 2.1e-09 65.5 75 38.7
Carub.0002s0853 Capsella rubella HOM05D000003 ORTHO05D000283 2.7e-09 65.1 71 36.6
BolC8t47863H Brassica oleracea HOM05D000003 ORTHO05D000283 6.0e-09 63.9 72 38.9
BolC9t57812H Brassica oleracea HOM05D000003 ORTHO05D000283 6.0e-09 63.9 73 43.8
BolC7t40516H Brassica oleracea HOM05D000003 ORTHO05D000283 7.8e-09 63.5 72 38.9
AT2G02520 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 1.7e-08 62.4 68 41.2
BcaC07g39116 Brassica carinata HOM05D000003 ORTHO05D000283 1.7e-08 62.4 70 40.0
C07p39070 Brassica napus HOM05D000003 ORTHO05D000283 3.0e-08 61.6 69 39.1
C09p45110 Brassica napus HOM05D012544 ORTHO05D012606 3.9e-08 61.2 42 64.3
BolC1t01432H Brassica oleracea HOM05D000003 ORTHO05D000283 3.9e-08 61.2 72 37.5
BolC3t16330H Brassica oleracea HOM05D000003 ORTHO05D000283 5.1e-08 60.8 70 40.0
BcaC05g29952 Brassica carinata HOM05D000003 ORTHO05D000283 6.6e-08 60.5 72 37.5
Carub.0003s3092 Capsella rubella HOM05D000003 ORTHO05D000283 6.6e-08 60.5 65 40.0
BcaC03g14082 Brassica carinata HOM05D000003 ORTHO05D000283 8.7e-08 60.1 72 38.9
BcaB01g06303 Brassica carinata HOM05D000003 ORTHO05D000283 1.5e-07 59.3 47 46.8
BcaC01g04544 Brassica carinata HOM05D000003 ORTHO05D000283 1.5e-07 59.3 72 34.7
BcaC06g34297 Brassica carinata HOM05D000003 ORTHO05D000283 1.5e-07 59.3 72 36.1
BolC6t35343H Brassica oleracea HOM05D000003 ORTHO05D000283 1.5e-07 59.3 72 36.1
BraA10t44622Z Brassica rapa HOM05D000003 ORTHO05D000006 1.5e-07 59.3 59 42.4
A04p02300 Brassica napus HOM05D000003 ORTHO05D000283 1.9e-07 58.9 36 61.1
C06p04470 Brassica napus HOM05D000003 ORTHO05D000283 1.9e-07 58.9 72 33.3
AL4G28120 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 2.5e-07 58.5 62 37.1
BolC3t17470H Brassica oleracea HOM05D000003 ORTHO05D000283 2.5e-07 58.5 48 47.9
BolC9t54513H Brassica oleracea HOM05D000003 ORTHO05D000283 2.5e-07 58.5 72 40.3
C01p15730 Brassica napus HOM05D000003 ORTHO05D000283 3.3e-07 58.2 59 39.0
BolC1t01526H Brassica oleracea HOM05D000003 ORTHO05D000283 3.3e-07 58.2 59 39.0
BraA09t40137Z Brassica rapa HOM05D000003 ORTHO05D033853 3.3e-07 58.2 59 45.8
BolC2t11108H Brassica oleracea HOM05D000003 ORTHO05D000283 5.6e-07 57.4 70 38.6
BraA07t28371Z Brassica rapa HOM05D000003 ORTHO05D000283 5.6e-07 57.4 42 47.6
AT4G04650 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 7.3e-07 57.0 70 37.1
BcaB04g17521 Brassica carinata HOM05D000003 ORTHO05D000283 7.3e-07 57.0 72 30.6
BraA07t29238Z Brassica rapa HOM05D000003 ORTHO05D000283 7.3e-07 57.0 42 52.4
THA.LOC109117009 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 7.3e-07 57.0 73 34.2
AL2G38250 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 9.6e-07 56.6 72 34.7
Carub.0006s0619 Capsella rubella HOM05D000003 ORTHO05D000283 9.6e-07 56.6 72 36.1
Rhsim10G0040700 Rhododendron simsii HOM05D000068 ORTHO05D000084 9.6e-07 56.6 55 41.8
C05p60790 Brassica napus HOM05D000003 ORTHO05D000283 1.2e-06 56.2 59 37.3
BolC2t07181H Brassica oleracea HOM05D000003 ORTHO05D000283 1.2e-06 56.2 41 48.8
AL7G34100 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.6e-06 55.8 69 37.7
AT1G43730 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 1.6e-06 55.8 70 40.0
BcaB06g27917 Brassica carinata HOM05D000003 ORTHO05D000283 1.6e-06 55.8 46 43.5
BcaC02g10364 Brassica carinata HOM05D000003 ORTHO05D000283 1.6e-06 55.8 66 37.9
BcaC02g12383 Brassica carinata HOM05D000003 ORTHO05D000283 1.6e-06 55.8 66 36.4
BolC3t15706H Brassica oleracea HOM05D000003 ORTHO05D000283 1.6e-06 55.8 46 43.5
AT1G45063 Arabidopsis thaliana HOM05D004027 ORTHO05D004467 2.1e-06 55.5 67 37.3
BcaC06g36136 Brassica carinata HOM05D000003 ORTHO05D000283 2.1e-06 55.5 44 47.7
BolC5t32204H Brassica oleracea HOM05D000003 ORTHO05D000283 2.1e-06 55.5 41 46.3
BcaB05g22928 Brassica carinata HOM05D000003 ORTHO05D000283 3.6e-06 54.7 46 50.0
BcaB06g29407 Brassica carinata HOM05D000003 ORTHO05D000283 3.6e-06 54.7 46 50.0
BolC8t48659H Brassica oleracea HOM05D002340 ORTHO05D003624 3.6e-06 54.7 42 47.6
ECA234G2874 Erigeron canadensis HOM05D000003 ORTHO05D000283 3.6e-06 54.7 67 43.3
PSO017G6417 Papaver somniferum HOM05D000003 ORTHO05D000283 3.6e-06 54.7 45 44.4
EL10Ac9g22438 Beta vulgaris HOM05D000003 ORTHO05D000283 4.7e-06 54.3 46 43.5
BcaB06g29380 Brassica carinata HOM05D000003 ORTHO05D000283 4.7e-06 54.3 69 33.3
BcaC05g25065 Brassica carinata HOM05D000003 ORTHO05D000283 4.7e-06 54.3 78 35.9
BraA05t22459Z Brassica rapa HOM05D000003 ORTHO05D000283 4.7e-06 54.3 41 43.9
BcaB02g07795 Brassica carinata HOM05D000003 ORTHO05D000283 6.2e-06 53.9 46 43.5
BolC7t45167H Brassica oleracea HOM05D000003 ORTHO05D000283 6.2e-06 53.9 36 50.0
BraA05t21451Z Brassica rapa HOM05D000003 ORTHO05D000283 6.2e-06 53.9 36 52.8
BcaB06g26157 Brassica carinata HOM05D000003 ORTHO05D000283 8.1e-06 53.5 36 50.0
BcaC05g27506 Brassica carinata HOM05D000003 ORTHO05D000283 8.1e-06 53.5 41 46.3
BolC1t03740H Brassica oleracea HOM05D000003 ORTHO05D000283 8.1e-06 53.5 39 48.7
BolC1t03920H Brassica oleracea HOM05D000003 ORTHO05D000283 8.1e-06 53.5 39 46.2
BolC6t35359H Brassica oleracea HOM05D000003 ORTHO05D000283 8.1e-06 53.5 48 39.6


User provided reference genes

Program Settings