Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p21920 Brassica napus HOM05D000003 ORTHO05D041027 1.4e-131 473.0 250 100.0
BolC7t42724H Brassica oleracea HOM05D000003 ORTHO05D041027 1.3e-124 449.9 250 96.0
BcaB02g07776 Brassica carinata HOM05D000003 ORTHO05D000007 4.3e-48 195.7 186 61.3
BraA02t09306Z Brassica rapa HOM05D000003 ORTHO05D000007 1.4e-38 164.1 185 50.3
BcaB06g25353 Brassica carinata HOM05D000003 ORTHO05D000283 4.5e-37 159.1 140 60.0
BcaB05g24536 Brassica carinata HOM05D000003 ORTHO05D000283 7.7e-37 158.3 178 50.6
C05p26910 Brassica napus HOM05D000003 ORTHO05D000007 1.3e-36 157.5 178 50.6
BcaB01g03208 Brassica carinata HOM05D000003 ORTHO05D000007 2.9e-36 156.4 122 61.5
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 2.9e-36 156.4 144 56.2
A03p52160 Brassica napus HOM05D000003 ORTHO05D000007 7.2e-35 151.8 112 62.5
BcaC09g50945 Brassica carinata HOM05D000003 ORTHO05D000007 1.2e-34 151.0 175 46.9
BcaC08g43142 Brassica carinata HOM05D000003 ORTHO05D000283 2.1e-34 150.2 196 46.9
BolC9t55311H Brassica oleracea HOM05D000003 ORTHO05D000007 2.1e-34 150.2 175 46.9
C04p45080 Brassica napus HOM05D028159 ORTHO05D028005 2.7e-34 149.8 168 51.2
BcaB07g33765 Brassica carinata HOM05D000003 ORTHO05D000007 3.6e-34 149.4 113 59.3
BcaC08g43363 Brassica carinata HOM05D000003 ORTHO05D000007 4.7e-34 149.1 180 47.8
BcaC01g05180 Brassica carinata HOM05D000003 ORTHO05D000007 6.1e-34 148.7 172 46.5
BolC6t35819H Brassica oleracea HOM05D000003 ORTHO05D000007 1.4e-33 147.5 180 47.8
BolC5t32258H Brassica oleracea HOM05D000003 ORTHO05D000007 1.8e-33 147.1 104 64.4
BraA09t40338Z Brassica rapa HOM05D000003 ORTHO05D000007 1.8e-33 147.1 161 49.7
C02p22170 Brassica napus HOM05D000003 ORTHO05D028000 2.3e-33 146.7 103 63.1
BcaC08g45218 Brassica carinata HOM05D000003 ORTHO05D000007 3.0e-33 146.4 103 65.0
BcaC02g12237 Brassica carinata HOM05D000003 ORTHO05D000007 3.9e-33 146.0 167 51.5
BraA05t20679Z Brassica rapa HOM05D000003 ORTHO05D000007 3.9e-33 146.0 150 50.0
A10p04200 Brassica napus HOM05D000003 ORTHO05D000007 1.1e-32 144.4 185 47.0
A09p40210 Brassica napus HOM05D000003 ORTHO05D000007 2.0e-32 143.7 103 61.2
BolC9t58036H Brassica oleracea HOM05D000003 ORTHO05D000007 2.0e-32 143.7 158 48.1
BraA09t39519Z Brassica rapa HOM05D000003 ORTHO05D000007 2.0e-32 143.7 103 61.2
BraA01t03255Z Brassica rapa HOM05D000003 ORTHO05D000007 2.6e-32 143.3 158 49.4
BcaC04g21713 Brassica carinata HOM05D000003 ORTHO05D000007 3.3e-32 142.9 183 44.3
A06p28910 Brassica napus HOM05D000003 ORTHO05D000007 4.4e-32 142.5 128 55.5
BcaB07g30860 Brassica carinata HOM05D000003 ORTHO05D000007 5.7e-32 142.1 184 44.6
Thhalv10000459m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 9.7e-32 141.4 147 51.0
BcaB06g25889 Brassica carinata HOM05D000003 ORTHO05D000007 1.3e-31 141.0 177 46.9
BcaC05g25979 Brassica carinata HOM05D000003 ORTHO05D000007 2.2e-31 140.2 171 48.5
BolC9t55712H Brassica oleracea HOM05D000003 ORTHO05D000007 3.7e-31 139.4 187 45.5
A03p34860 Brassica napus HOM05D000003 ORTHO05D000007 1.1e-30 137.9 181 45.3
Thhalv10022289m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 1.4e-30 137.5 150 50.0
Thhalv10017665m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 7.0e-30 135.2 150 49.3
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 1.2e-29 134.4 90 64.4
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 1.2e-29 134.4 90 64.4
Thhalv10002285m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 1.2e-29 134.4 180 41.1
BraA04t18354Z Brassica rapa HOM05D000003 ORTHO05D000007 7.7e-29 131.7 122 54.1
Thhalv10015367m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 1.0e-28 131.3 173 41.6
AL96U10010 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.3e-28 131.0 102 58.8
Thhalv10015497m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 2.9e-28 129.8 173 41.6
BcaC02g09582 Brassica carinata HOM05D000003 ORTHO05D000007 3.8e-28 129.4 103 58.3
BraA06t25893Z Brassica rapa HOM05D000003 ORTHO05D000007 1.1e-27 127.9 142 50.0
CARHR110840 Cardamine hirsuta HOM05D000003 ORTHO05D000007 1.5e-27 127.5 132 47.7
BcaC01g00760 Brassica carinata HOM05D000003 ORTHO05D000007 2.5e-27 126.7 178 43.8
BcaNung04603 Brassica carinata HOM05D000003 ORTHO05D000007 2.5e-27 126.7 88 62.5
BcaB08g36128 Brassica carinata HOM05D000003 ORTHO05D000007 3.2e-27 126.3 102 55.9
BcaC05g26008 Brassica carinata HOM05D000003 ORTHO05D000007 3.2e-27 126.3 181 43.1
Thhalv10017828m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 3.2e-27 126.3 102 54.9
BcaC07g37540 Brassica carinata HOM05D000003 ORTHO05D000007 1.2e-26 124.4 103 55.3
BcaNung01863 Brassica carinata HOM05D000003 ORTHO05D000007 1.2e-26 124.4 103 55.3
BcaC03g13859 Brassica carinata HOM05D000003 ORTHO05D000007 1.6e-26 124.0 157 48.4
Thhalv10009475m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 1.6e-26 124.0 167 43.1
Thhalv10003309m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 2.1e-26 123.6 102 53.9
C01p16120 Brassica napus HOM05D000003 ORTHO05D000007 1.0e-25 121.3 139 48.2
A03p33310 Brassica napus HOM05D000003 ORTHO05D000007 1.4e-25 120.9 185 40.0
BcaB03g14792 Brassica carinata HOM05D000003 ORTHO05D000007 2.3e-25 120.2 197 40.1
Thhalv10024027m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 3.0e-25 119.8 181 39.8
BcaC04g20827 Brassica carinata HOM05D000003 ORTHO05D000007 4.0e-25 119.4 176 42.6
BolC9t56730H Brassica oleracea HOM05D000003 ORTHO05D000007 4.0e-25 119.4 176 42.6
BcaC07g39338 Brassica carinata HOM05D000003 ORTHO05D000007 5.2e-25 119.0 179 43.0
BcaC04g23526 Brassica carinata HOM05D000003 ORTHO05D000007 2.6e-24 116.7 144 44.4
BcaC06g34907 Brassica carinata HOM05D037950 ORTHO05D011778 3.3e-24 116.3 73 90.4
BolC4t24667H Brassica oleracea HOM05D000003 ORTHO05D000007 5.7e-24 115.5 173 46.2
BcaNung03157 Brassica carinata HOM05D000003 ORTHO05D000007 1.3e-23 114.4 91 59.3
BcaC05g27646 Brassica carinata HOM05D000003 ORTHO05D023912 1.8e-22 110.5 109 51.4
C05p36340 Brassica napus HOM05D000003 ORTHO05D023912 1.8e-22 110.5 109 51.4
BcaB01g02113 Brassica carinata HOM05D000003 ORTHO05D000283 3.1e-22 109.8 165 42.4
BcaB02g11235 Brassica carinata HOM05D000003 ORTHO05D000007 5.9e-21 105.5 186 35.5
C01p24010 Brassica napus HOM05D065086 ORTHO05D032039 3.2e-19 99.8 99 51.5
THA.LOC104803404 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 8.8e-17 91.7 181 34.3
A01p34820 Brassica napus HOM05D000003 ORTHO05D000007 1.5e-16 90.9 124 36.3
C02p34560 Brassica napus HOM05D000003 ORTHO05D023912 4.4e-16 89.4 73 50.7
BcaC01g03259 Brassica carinata HOM05D000003 ORTHO05D000007 9.8e-16 88.2 193 29.5
THA.LOC109116097 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 9.8e-16 88.2 174 34.5
BcaC04g18816 Brassica carinata HOM05D000003 ORTHO05D032545 2.8e-15 86.7 149 37.6
THA.LOC104798910 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 8.3e-15 85.1 146 34.2
BraA05t20378Z Brassica rapa HOM05D000003 ORTHO05D000007 7.0e-14 82.0 46 80.4
THA.LOC104799764 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.6e-13 80.9 114 36.8
BolC2t07137H Brassica oleracea HOM05D000003 ORTHO05D000007 3.5e-13 79.7 46 76.1
THA.LOC104810236 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.3e-12 77.8 171 31.6
BcaB03g13717 Brassica carinata HOM05D000003 ORTHO05D032039 2.3e-12 77.0 73 53.4
C08p23550 Brassica napus HOM05D000003 ORTHO05D000007 3.8e-12 76.3 46 71.7
THA.LOC104815137 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 8.6e-12 75.1 74 43.2
BcaC09g48441 Brassica carinata HOM05D000003 ORTHO05D000007 1.9e-11 73.9 46 65.2
THA.LOC104800051 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.5e-11 73.6 133 36.1
BolC3t19489H Brassica oleracea HOM05D000112 ORTHO05D032741 4.2e-11 72.8 94 39.4
BolC1t01692H Brassica oleracea HOM05D000003 ORTHO05D000007 7.2e-11 72.0 46 67.4
THA.LOC104810140 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 1.2e-10 71.2 131 28.2
BcaC05g26139 Brassica carinata HOM05D000003 ORTHO05D000007 2.1e-10 70.5 46 65.2
THA.LOC104804985 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 4.0e-09 66.2 68 41.2
BraA07t28386Z Brassica rapa HOM05D000003 ORTHO05D000007 5.2e-09 65.9 46 58.7
THA.LOC104798680 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 5.2e-09 65.9 125 28.8
THA.LOC104798687 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 1.2e-08 64.7 68 41.2
THA.LOC104804833 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 1.2e-08 64.7 189 27.5
BcaB03g14903 Brassica carinata HOM05D039480 ORTHO05D000007 3.4e-08 63.2 112 44.6
BcaC02g11141 Brassica carinata HOM05D000003 ORTHO05D000007 5.7e-08 62.4 46 60.9
THA.LOC104820083 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 7.5e-08 62.0 174 28.7
BolC3t18621H Brassica oleracea HOM05D000003 ORTHO05D000007 1.7e-07 60.8 45 57.8
BolC3t17711H Brassica oleracea HOM05D000003 ORTHO05D000007 2.2e-07 60.5 46 56.5
THA.LOC104804698 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.2e-07 60.5 47 51.1
BolC5t32358H Brassica oleracea HOM05D000003 ORTHO05D023912 2.8e-07 60.1 63 47.6
C03p63630 Brassica napus HOM05D000003 ORTHO05D000007 8.3e-07 58.5 45 55.6
BolC5t30822H Brassica oleracea HOM05D000003 ORTHO05D000007 3.1e-06 56.6 35 62.9


User provided reference genes

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