Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p20300 Brassica napus HOM05D000549 ORTHO05D012488 6.5e-45 183.7 95 100.0
BolC8t48777H Brassica oleracea HOM05D000549 ORTHO05D012488 6.1e-35 150.6 95 87.4
BcaC09g51677 Brassica carinata HOM05D000549 ORTHO05D001527 3.7e-16 88.2 78 65.4
C01p10520 Brassica napus HOM05D000549 ORTHO05D001527 3.7e-16 88.2 78 65.4
BolC1t01015H Brassica oleracea HOM05D000549 ORTHO05D001527 3.7e-16 88.2 78 65.4
BraA01t00845Z Brassica rapa HOM05D000549 ORTHO05D001527 1.1e-15 86.7 78 64.1
Sp7g26950 Schrenkiella parvula HOM05D000549 ORTHO05D001527 1.1e-15 86.7 78 64.1
Thhalv10024533m.g Eutrema salsugineum HOM05D000549 ORTHO05D001527 1.8e-15 85.9 78 64.1
A01p08980 Brassica napus HOM05D000549 ORTHO05D001527 3.1e-15 85.1 78 62.8
A08p19890 Brassica napus HOM05D000549 ORTHO05D001527 3.1e-15 85.1 78 64.1
BraA08t33946Z Brassica rapa HOM05D000549 ORTHO05D001527 3.1e-15 85.1 78 64.1
BolC3t19667H Brassica oleracea HOM05D000549 ORTHO05D012488 4.1e-15 84.7 78 62.8
A06p12830 Brassica napus HOM05D000549 ORTHO05D012488 5.4e-15 84.3 78 61.5
BraA05t21578Z Brassica rapa HOM05D000549 ORTHO05D012488 5.4e-15 84.3 78 61.5
AL7G23450 Arabidopsis lyrata HOM05D000549 ORTHO05D001527 7.0e-15 84.0 78 61.5
BcaC07g38363 Brassica carinata HOM05D000549 ORTHO05D001527 9.1e-15 83.6 78 62.8
C08p11110 Brassica napus HOM05D000549 ORTHO05D001527 9.1e-15 83.6 78 62.8
AT4G29010 Arabidopsis thaliana HOM05D000549 ORTHO05D001527 1.2e-14 83.2 77 62.3
BcaB03g12590 Brassica carinata HOM05D000549 ORTHO05D001527 1.6e-14 82.8 78 62.8
Aa31LG2G21340 Aethionema arabicum HOM05D000549 ORTHO05D001527 2.0e-14 82.4 78 60.3
C02p08830 Brassica napus HOM05D000549 ORTHO05D012488 2.0e-14 82.4 78 61.5
BolC8t48780H Brassica oleracea HOM05D000549 ORTHO05D001527 2.0e-14 82.4 78 62.8
BraA09t37213Z Brassica rapa HOM05D000549 ORTHO05D012488 2.0e-14 82.4 78 61.5
Carub.0007s1163 Capsella rubella HOM05D000549 ORTHO05D001527 3.5e-14 81.6 78 59.0
CARHR236740 Cardamine hirsuta HOM05D000549 ORTHO05D001527 5.9e-14 80.9 77 61.0
BcaNung00444 Brassica carinata HOM05D000549 ORTHO05D001527 5.0e-13 77.8 78 59.0
BcaNung02891 Brassica carinata HOM05D000549 ORTHO05D001527 4.0e-10 68.2 78 52.6
C07p56580 Brassica napus HOM05D000549 ORTHO05D001527 4.0e-10 68.2 78 52.6
BolC7t46136H Brassica oleracea HOM05D000549 ORTHO05D001527 4.0e-10 68.2 78 52.6
BraA03t14924Z Brassica rapa HOM05D000549 ORTHO05D001527 6.8e-10 67.4 78 52.6
A03p58590 Brassica napus HOM05D000549 ORTHO05D001527 2.0e-09 65.9 78 51.3
A03p58640 Brassica napus HOM05D000549 ORTHO05D001527 2.0e-09 65.9 78 51.3
BraA03t14919Z Brassica rapa HOM05D000549 ORTHO05D001527 2.0e-09 65.9 78 51.3
Thecc.09G107300 Theobroma cacao HOM05D000549 ORTHO05D001527 2.0e-09 65.9 75 52.0
Rhsim01G0100600 Rhododendron simsii HOM05D000549 ORTHO05D001527 4.4e-09 64.7 74 51.4
Dinv41622 Davidia involucrata HOM05D000549 ORTHO05D001527 5.7e-09 64.3 75 48.0
Hma1.2p1_1151F.1_g261980 Hydrangea macrophylla HOM05D000549 ORTHO05D001527 7.5e-09 63.9 75 46.7
MD15G1181900 Malus domestica HOM05D000549 ORTHO05D001527 1.3e-08 63.2 75 48.0
Gohir.D08G262500 Gossypium hirsutum HOM05D000549 ORTHO05D001527 1.7e-08 62.8 72 51.4
Eucgr.C01261 Eucalyptus grandis HOM05D000549 ORTHO05D001527 2.8e-08 62.0 75 46.7
Gohir.A08G241700 Gossypium hirsutum HOM05D000549 ORTHO05D001527 3.7e-08 61.6 72 51.4
Cpa.g.sc846.2 Carica papaya HOM05D000549 ORTHO05D001527 4.9e-08 61.2 75 46.7
Gorai.004G280500 Gossypium raimondii HOM05D000549 ORTHO05D001527 4.9e-08 61.2 72 50.0
Duzib187G0435 Durio zibethinus HOM05D000549 ORTHO05D001527 6.3e-08 60.8 75 49.3
Sabra18G0070700 Salix brachista HOM05D000549 ORTHO05D001527 8.3e-08 60.5 72 47.2
Duzib168G0744 Durio zibethinus HOM05D000549 ORTHO05D001527 1.1e-07 60.1 75 48.0
ECA234G4038 Erigeron canadensis HOM05D000549 ORTHO05D001527 1.1e-07 60.1 75 46.7
Lj7A654G24 Lonicera japonica HOM05D000549 ORTHO05D012488 1.1e-07 60.1 75 48.0
PGR142G3602 Punica granatum HOM05D000549 ORTHO05D001527 1.1e-07 60.1 75 44.0
Ah.09g230970 Amaranthus hybridus HOM05D000549 ORTHO05D001527 1.4e-07 59.7 72 47.2
Potri.018G082900 Populus trichocarpa HOM05D000549 ORTHO05D001527 1.8e-07 59.3 72 45.8
Lsat_1_v5_gn_5_103001 Lactuca sativa HOM05D000549 ORTHO05D001527 2.4e-07 58.9 72 48.6
CSS0001104 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D001527 3.1e-07 58.5 74 47.3
Ciclev10007590m.g Citrus clementina HOM05D000549 ORTHO05D001527 3.1e-07 58.5 72 44.4
MD02G1043300 Malus domestica HOM05D000549 ORTHO05D001527 3.1e-07 58.5 75 45.3
CANSAT02G0008 Cannabis sativa HOM05D000549 ORTHO05D001527 4.1e-07 58.2 72 48.6
AUR62010951 Chenopodium quinoa HOM05D000549 ORTHO05D001527 4.1e-07 58.2 72 44.4
AUR62021468 Chenopodium quinoa HOM05D000549 ORTHO05D001527 4.1e-07 58.2 72 44.4
HanXRQChr12g0355031 Helianthus annuus HOM05D000549 ORTHO05D001527 4.1e-07 58.2 72 47.2
Prupe.7G233700 Prunus persica HOM05D000549 ORTHO05D001527 4.1e-07 58.2 75 45.3
Cfa003237 Carpinus fangiana HOM05D000549 ORTHO05D001527 5.4e-07 57.8 75 45.3
DCAR_028698 Daucus carota HOM05D000549 ORTHO05D001527 5.4e-07 57.8 72 47.2
FvH4_1g04350 Fragaria vesca HOM05D000549 ORTHO05D001527 5.4e-07 57.8 75 44.0
FAN19G1285 Fragaria x ananassa HOM05D000549 ORTHO05D001527 5.4e-07 57.8 75 44.0
FAN26G3066 Fragaria x ananassa HOM05D000549 ORTHO05D001527 5.4e-07 57.8 75 44.0
FAN28G3007 Fragaria x ananassa HOM05D000549 ORTHO05D001527 5.4e-07 57.8 75 44.0
Atru.chr7.1369 Acer truncatum HOM05D000549 ORTHO05D001527 7.0e-07 57.4 72 44.4
A03p01310 Brassica napus HOM05D000549 ORTHO05D012488 9.2e-07 57.0 78 47.4
BraA04t18584Z Brassica rapa HOM05D000549 ORTHO05D012488 9.2e-07 57.0 85 44.7
Dinv36654 Davidia involucrata HOM05D000549 ORTHO05D001527 9.2e-07 57.0 75 45.3
vmacro20718 Vaccinium macrocarpon HOM05D000549 ORTHO05D001527 9.2e-07 57.0 78 42.3
GSVIVG01015364001 Vitis vinifera HOM05D000549 ORTHO05D001527 9.2e-07 57.0 75 45.3
Nitab4.5_0000097g0050 Nicotiana tabacum HOM05D000549 ORTHO05D001527 1.2e-06 56.6 74 45.9
Manes.16G113900 Manihot esculenta HOM05D000549 ORTHO05D001527 1.6e-06 56.2 72 44.4
Nn2g11680 Nelumbo nucifera HOM05D000549 ORTHO05D001527 1.6e-06 56.2 75 42.7
MD02G1043200 Malus domestica HOM05D000549 ORTHO05D001527 2.0e-06 55.8 75 44.0
Manes.03G022900 Manihot esculenta HOM05D000549 ORTHO05D001527 2.0e-06 55.8 72 44.4
arahy.Tifrunner.gnm1.ann1.88J559 Arachis hypogaea HOM05D000549 ORTHO05D001527 2.7e-06 55.5 78 39.7
arahy.Tifrunner.gnm1.ann1.9G9LXM Arachis hypogaea HOM05D000549 ORTHO05D001527 2.7e-06 55.5 78 39.7
CiPaw.03G229300 Carya illinoinensis HOM05D000549 ORTHO05D001527 2.7e-06 55.5 75 46.7
CiPaw.04G162800 Carya illinoinensis HOM05D000549 ORTHO05D001527 2.7e-06 55.5 75 42.7
Haze_25769 Corylus avellana HOM05D000549 ORTHO05D001527 2.7e-06 55.5 75 44.0
PSO782G3010 Papaver somniferum HOM05D000549 ORTHO05D001527 2.7e-06 55.5 79 44.3
vmacro20719 Vaccinium macrocarpon HOM05D000549 ORTHO05D001527 2.7e-06 55.5 73 43.8
EL10Ac8g18444 Beta vulgaris HOM05D000549 ORTHO05D001527 3.5e-06 55.1 72 44.4
Nitab4.5_0003733g0010 Nicotiana tabacum HOM05D000549 ORTHO05D001527 3.5e-06 55.1 75 44.0
Oeu013424.1 Olea europaea HOM05D000549 ORTHO05D001527 3.5e-06 55.1 73 43.8
Oeu013425.1 Olea europaea HOM05D000549 ORTHO05D012488 3.5e-06 55.1 73 43.8
PSO566G0056 Papaver somniferum HOM05D000549 ORTHO05D001527 3.5e-06 55.1 79 43.0
Solyc07g019670.4 Solanum lycopersicum HOM05D000549 ORTHO05D001527 3.5e-06 55.1 72 47.2
Sopen07g008470 Solanum pennellii HOM05D000549 ORTHO05D001527 3.5e-06 55.1 72 47.2
Ah.14g082340 Amaranthus hybridus HOM05D000549 ORTHO05D001527 4.5e-06 54.7 72 43.1
Cc06_g09910 Coffea canephora HOM05D000549 ORTHO05D001527 4.5e-06 54.7 74 43.2
Nitab4.5_0004391g0080 Nicotiana tabacum HOM05D000549 ORTHO05D001527 4.5e-06 54.7 75 44.0
Duzib168G0748 Durio zibethinus HOM05D000549 ORTHO05D001527 5.9e-06 54.3 78 41.0
TWI34G1768 Tripterygium wilfordii HOM05D000549 ORTHO05D001527 5.9e-06 54.3 75 44.0
Eucgr.C01265 Eucalyptus grandis HOM05D000549 ORTHO05D001527 7.8e-06 53.9 75 41.3
Peaxi162Scf01363g00003 Petunia axillaris HOM05D000549 ORTHO05D001527 7.8e-06 53.9 75 44.0
TWI63G1679 Tripterygium wilfordii HOM05D000549 ORTHO05D001527 7.8e-06 53.9 75 42.7


User provided reference genes

Program Settings