Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p20210 Brassica napus HOM05D002679 ORTHO05D010703 2.4e-101 372.1 176 100.0
BolC7t42541H Brassica oleracea HOM05D002679 ORTHO05D010703 1.9e-98 362.5 190 92.6
BcaC06g35059 Brassica carinata HOM05D002679 ORTHO05D010703 2.2e-86 322.4 207 78.7
BcaB03g14132 Brassica carinata HOM05D002679 ORTHO05D010703 4.6e-52 208.4 205 55.1
C05p43390 Brassica napus HOM05D002679 ORTHO05D010703 6.6e-43 177.9 215 47.0
BcaB03g14130 Brassica carinata HOM05D002679 ORTHO05D010703 3.7e-38 162.2 207 45.4
A07p13740 Brassica napus HOM05D002679 ORTHO05D010703 4.6e-36 155.2 216 44.0
AL1G37720 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 5.1e-35 151.8 201 41.8
Carub.0001s2342 Capsella rubella HOM05D002679 ORTHO05D010703 1.2e-33 147.1 204 42.2
AT1G23960 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 8.1e-33 144.4 208 40.9
BraA07t29124Z Brassica rapa HOM05D002679 ORTHO05D010703 1.5e-31 140.2 128 58.6
CARHR160050 Cardamine hirsuta HOM05D002679 ORTHO05D010703 9.9e-31 137.5 200 38.5
BcaB03g14126 Brassica carinata HOM05D002679 ORTHO05D010703 5.4e-29 131.7 141 53.9
Carub.0001s2694 Capsella rubella HOM05D002679 ORTHO05D010703 1.3e-27 127.1 205 37.6
BcaC06g35072 Brassica carinata HOM05D002679 ORTHO05D010703 1.7e-27 126.7 190 42.1
A07p13750 Brassica napus HOM05D002679 ORTHO05D010703 2.3e-27 126.3 64 89.1
AT1G23970 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 1.5e-26 123.6 243 34.6
AT1G23950 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 1.9e-26 123.2 248 33.9
BolC7t42535H Brassica oleracea HOM05D002679 ORTHO05D010703 7.3e-26 121.3 119 53.8
A07p13690 Brassica napus HOM05D002679 ORTHO05D010703 9.6e-26 120.9 247 35.2
Thhalv10009578m.g Eutrema salsugineum HOM05D002679 ORTHO05D010703 6.2e-25 118.2 158 40.5
AL1G42110 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 1.4e-24 117.1 205 35.6
CARHR028040 Cardamine hirsuta HOM05D002679 ORTHO05D010703 2.4e-24 116.3 208 35.6
AT1G28500 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 2.9e-22 109.4 208 35.1
AL1G37710 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 6.4e-22 108.2 185 35.1
Carub.0001s2632 Capsella rubella HOM05D002679 ORTHO05D010703 1.4e-21 107.1 209 33.0
BcaB03g14128 Brassica carinata HOM05D002679 ORTHO05D010703 3.2e-21 105.9 189 34.9
C07p20140 Brassica napus HOM05D002679 ORTHO05D010703 1.0e-19 100.9 78 62.8
AL1G37670 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 3.0e-19 99.4 74 64.9
Carub.0003s1935 Capsella rubella HOM05D002679 ORTHO05D010703 3.0e-19 99.4 203 33.0
AT1G19060 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 6.6e-19 98.2 148 39.9
CARHR087530 Cardamine hirsuta HOM05D002679 ORTHO05D010703 6.6e-19 98.2 88 58.0
AL3G32940 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 1.1e-18 97.4 197 31.5
AT3G19520 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 3.3e-18 95.9 198 32.8
Carub.0003s1934 Capsella rubella HOM05D002679 ORTHO05D010703 2.1e-17 93.2 203 31.5
BcaC06g35071 Brassica carinata HOM05D002679 ORTHO05D010703 8.1e-17 91.3 214 33.2
BcaB03g14127 Brassica carinata HOM05D002679 ORTHO05D010703 1.1e-16 90.9 212 32.5
AL1G41350 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 6.9e-16 88.2 71 57.7
AT1G27860 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 9.0e-16 87.8 172 34.3
AL5G14060 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 5.8e-15 85.1 208 32.7
AL108U10030 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 9.9e-15 84.3 207 31.9
A02p37800 Brassica napus HOM05D002679 ORTHO05D012984 1.7e-14 83.6 198 31.8
AT1G02770 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 2.2e-14 83.2 188 31.9
BraA02t08763Z Brassica rapa HOM05D002679 ORTHO05D012984 2.2e-14 83.2 198 31.8
C02p61320 Brassica napus HOM05D002679 ORTHO05D012984 2.9e-14 82.8 183 33.3
AL3G32930 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 1.1e-13 80.9 81 49.4
BcaC03g17689 Brassica carinata HOM05D002679 ORTHO05D012984 1.9e-13 80.1 198 31.3
C02p56980 Brassica napus HOM05D002679 ORTHO05D012984 1.9e-13 80.1 198 31.3
BolC2t11767H Brassica oleracea HOM05D002679 ORTHO05D012984 1.9e-13 80.1 198 31.3
CARHR087540 Cardamine hirsuta HOM05D002679 ORTHO05D010703 1.9e-13 80.1 55 69.1
AL8G40780 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 2.4e-13 79.7 195 34.4
BcaB07g34162 Brassica carinata HOM05D002679 ORTHO05D012984 2.4e-13 79.7 211 30.3
A07p13700 Brassica napus HOM05D002679 ORTHO05D010703 5.4e-13 78.6 158 36.7
BcaC03g17685 Brassica carinata HOM05D002679 ORTHO05D012984 2.1e-12 76.6 146 35.6
BcaC03g18072 Brassica carinata HOM05D002679 ORTHO05D012984 5.1e-11 72.0 173 32.9
AL1G49380 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 8.7e-11 71.2 158 33.5
AL2G22820 Arabidopsis lyrata HOM05D002679 ORTHO05D023662 1.5e-10 70.5 192 28.6
C02p56940 Brassica napus HOM05D002679 ORTHO05D012984 2.5e-10 69.7 80 48.8
C07p20160 Brassica napus HOM05D002679 ORTHO05D040585 2.5e-10 69.7 68 48.5
BolC2t11763H Brassica oleracea HOM05D002679 ORTHO05D012984 2.5e-10 69.7 80 48.8
BolC7t42537H Brassica oleracea HOM05D002679 ORTHO05D040585 2.5e-10 69.7 68 48.5
Thhalv10009725m.g Eutrema salsugineum HOM05D002679 ORTHO05D010703 9.6e-10 67.8 88 44.3
BcaC02g12340 Brassica carinata HOM05D002679 ORTHO05D014105 1.6e-09 67.0 158 31.6
BolC7t42536H Brassica oleracea HOM05D002679 ORTHO05D010703 3.7e-09 65.9 68 51.5
C08p13850 Brassica napus HOM05D002679 ORTHO05D027393 6.2e-09 65.1 176 30.1
AL1G49350 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 1.1e-08 64.3 159 32.1
AL1G49370 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 1.1e-08 64.3 159 32.1
C04p04980 Brassica napus HOM05D002679 ORTHO05D014105 1.1e-08 64.3 150 32.0
BolC4t22130H Brassica oleracea HOM05D002679 ORTHO05D014105 1.1e-08 64.3 150 32.0
AL1G35520 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 1.8e-08 63.5 155 29.0
BolC8t49020H Brassica oleracea HOM05D002679 ORTHO05D027393 1.8e-08 63.5 175 29.1
AT1G22090 Arabidopsis thaliana HOM05D002679 ORTHO05D010656 2.4e-08 63.2 154 30.5
CARHR279920 Cardamine hirsuta HOM05D002679 ORTHO05D012984 2.4e-08 63.2 187 30.5
BolC2t12180H Brassica oleracea HOM05D002679 ORTHO05D012984 3.1e-08 62.8 129 34.9
BcaC07g38618 Brassica carinata HOM05D002679 ORTHO05D027393 5.3e-08 62.0 188 28.2
Carub.0004s2240 Capsella rubella HOM05D002679 ORTHO05D010703 5.3e-08 62.0 188 29.3
AL1G35530 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 6.9e-08 61.6 154 30.5
C08p13490 Brassica napus HOM05D002679 ORTHO05D024283 6.9e-08 61.6 203 27.1
AL9U11920 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 1.2e-07 60.8 152 29.6
AL7G23540 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 9.9e-07 57.8 198 23.7
Thhalv10009541m.g Eutrema salsugineum HOM05D002679 ORTHO05D011194 9.9e-07 57.8 174 25.9
Thhalv10009919m.g Eutrema salsugineum HOM05D002679 ORTHO05D011194 9.9e-07 57.8 174 25.9
AL7G36490 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 1.3e-06 57.4 193 26.4
BcaB03g13318 Brassica carinata HOM05D002679 ORTHO05D010656 1.3e-06 57.4 145 32.4
Aa31LG8G17520 Aethionema arabicum HOM05D002666 ORTHO05D004769 1.7e-06 57.0 124 30.6
BcaC07g38416 Brassica carinata HOM05D000200 ORTHO05D000262 2.2e-06 56.6 97 38.1
BcaC07g38442 Brassica carinata HOM05D002679 ORTHO05D010656 2.2e-06 56.6 97 38.1
C08p12110 Brassica napus HOM05D002679 ORTHO05D010656 2.2e-06 56.6 97 38.1
BolC9t59601H Brassica oleracea HOM05D002679 ORTHO05D023662 2.2e-06 56.6 223 29.1
AL4G35970 Arabidopsis lyrata HOM05D002679 ORTHO05D012452 2.9e-06 56.2 137 30.7
BcaC07g38546 Brassica carinata HOM05D002679 ORTHO05D024283 2.9e-06 56.2 204 26.0
BolC8t48984H Brassica oleracea HOM05D002679 ORTHO05D024283 2.9e-06 56.2 204 26.0
A10p28330 Brassica napus HOM05D002679 ORTHO05D023662 8.4e-06 54.7 163 29.4


User provided reference genes

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