Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p20160 Brassica napus HOM05D002679 ORTHO05D040585 6.1e-111 404.1 191 100.0
BolC7t42537H Brassica oleracea HOM05D002679 ORTHO05D040585 6.1e-111 404.1 191 100.0
BcaC06g35071 Brassica carinata HOM05D002679 ORTHO05D010703 1.1e-59 233.8 183 66.7
BolC7t42536H Brassica oleracea HOM05D002679 ORTHO05D010703 1.3e-49 200.3 140 73.6
BcaB03g14127 Brassica carinata HOM05D002679 ORTHO05D010703 9.6e-48 194.1 198 55.6
BcaB03g14128 Brassica carinata HOM05D002679 ORTHO05D010703 2.5e-35 152.9 182 49.5
A07p13740 Brassica napus HOM05D002679 ORTHO05D010703 1.7e-23 113.6 156 39.1
Carub.0001s2694 Capsella rubella HOM05D002679 ORTHO05D010703 1.7e-23 113.6 113 49.6
BcaB03g14132 Brassica carinata HOM05D002679 ORTHO05D010703 8.2e-23 111.3 176 39.2
AL1G37670 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 7.0e-22 108.2 163 38.0
AL1G37720 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 9.1e-22 107.8 164 40.9
AL1G42110 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 2.0e-21 106.7 114 46.5
BraA07t29124Z Brassica rapa HOM05D002679 ORTHO05D010703 1.3e-20 104.0 110 48.2
AL3G32930 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 3.8e-20 102.4 128 44.5
AT1G28500 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 3.8e-20 102.4 114 42.1
Carub.0001s2342 Capsella rubella HOM05D002679 ORTHO05D010703 1.1e-19 100.9 128 43.0
CARHR028040 Cardamine hirsuta HOM05D002679 ORTHO05D010703 1.9e-19 100.1 148 38.5
A07p13700 Brassica napus HOM05D002679 ORTHO05D010703 5.5e-19 98.6 181 36.5
AT1G23960 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 4.7e-18 95.5 103 48.5
C05p43390 Brassica napus HOM05D002679 ORTHO05D010703 4.7e-18 95.5 178 32.0
AL1G37710 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 1.0e-17 94.4 100 48.0
AL3G32940 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 2.3e-17 93.2 104 41.3
BraA07t29121Z Brassica rapa HOM05D002679 ORTHO05D010703 3.0e-17 92.8 193 34.7
CARHR160050 Cardamine hirsuta HOM05D002679 ORTHO05D010703 4.0e-17 92.4 100 45.0
Carub.0001s2632 Capsella rubella HOM05D002679 ORTHO05D010703 5.2e-17 92.0 170 35.9
AT3G19520 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 2.6e-16 89.7 98 44.9
BcaB03g14130 Brassica carinata HOM05D002679 ORTHO05D010703 3.3e-16 89.4 124 38.7
Carub.0003s1935 Capsella rubella HOM05D002679 ORTHO05D010703 9.7e-16 87.8 128 39.1
Carub.0003s1934 Capsella rubella HOM05D002679 ORTHO05D010703 1.3e-15 87.4 138 38.4
AT1G23950 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 1.7e-15 87.0 154 37.0
CARHR087530 Cardamine hirsuta HOM05D002679 ORTHO05D010703 3.7e-15 85.9 100 45.0
BcaC06g35059 Brassica carinata HOM05D002679 ORTHO05D010703 4.8e-15 85.5 139 35.3
Thhalv10009578m.g Eutrema salsugineum HOM05D002679 ORTHO05D010703 6.3e-15 85.1 82 50.0
A07p13690 Brassica napus HOM05D002679 ORTHO05D010703 1.8e-14 83.6 178 30.9
AT1G23970 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 3.1e-14 82.8 205 31.2
Thhalv10009725m.g Eutrema salsugineum HOM05D002679 ORTHO05D010703 3.8e-12 75.9 111 38.7
AT1G27860 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 6.5e-12 75.1 114 37.7
AL1G49380 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 5.5e-11 72.0 116 38.8
AL1G49350 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 9.4e-11 71.2 117 39.3
AL1G49370 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 9.4e-11 71.2 117 39.3
BcaC06g35072 Brassica carinata HOM05D002679 ORTHO05D010703 1.2e-10 70.9 168 28.0
C07p20210 Brassica napus HOM05D002679 ORTHO05D010703 6.1e-10 68.6 68 48.5
BolC7t42541H Brassica oleracea HOM05D002679 ORTHO05D010703 6.1e-10 68.6 68 48.5
AT1G02770 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 1.4e-09 67.4 117 35.9
CARHR160040 Cardamine hirsuta HOM05D002679 ORTHO05D010703 1.4e-09 67.4 74 43.2
C07p20140 Brassica napus HOM05D002679 ORTHO05D010703 2.3e-09 66.6 103 35.9
BolC7t42535H Brassica oleracea HOM05D002679 ORTHO05D010703 2.3e-09 66.6 103 35.9
AL9U11920 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 3.4e-08 62.8 162 29.6
BolC9t59601H Brassica oleracea HOM05D002679 ORTHO05D023662 3.4e-08 62.8 160 31.2
C09p68590 Brassica napus HOM05D002679 ORTHO05D023662 4.4e-08 62.4 161 31.1
BcaB03g13318 Brassica carinata HOM05D002679 ORTHO05D010656 5.7e-08 62.0 161 29.8
A10p28330 Brassica napus HOM05D002679 ORTHO05D023662 9.8e-08 61.2 161 31.1
BcaC02g12322 Brassica carinata HOM05D002679 ORTHO05D014105 1.3e-07 60.8 174 32.8
BraA10t44880Z Brassica rapa HOM05D002679 ORTHO05D023662 1.3e-07 60.8 161 30.4
AL1G41350 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 1.7e-07 60.5 64 42.2
BolC4t22164H Brassica oleracea HOM05D002679 ORTHO05D014105 2.2e-07 60.1 154 33.8
C07p20150 Brassica napus HOM05D002679 ORTHO05D010703 2.8e-07 59.7 60 53.3
BcaC07g38442 Brassica carinata HOM05D002679 ORTHO05D010656 6.3e-07 58.5 95 33.7
C08p12110 Brassica napus HOM05D002679 ORTHO05D010656 6.3e-07 58.5 95 33.7
AL108U10030 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 1.8e-06 57.0 127 32.3
AL8G40780 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 1.8e-06 57.0 115 34.8
BcaC07g38416 Brassica carinata HOM05D000200 ORTHO05D000262 1.8e-06 57.0 113 31.0
AL2G22820 Arabidopsis lyrata HOM05D002679 ORTHO05D023662 3.1e-06 56.2 108 34.3
CARHR087540 Cardamine hirsuta HOM05D002679 ORTHO05D010703 9.1e-06 54.7 72 41.7


User provided reference genes

Program Settings