Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p19070 Brassica napus HOM05D003702 ORTHO05D014526 4.3e-121 438.0 215 100.0
BolC7t42416H Brassica oleracea HOM05D003702 ORTHO05D014526 1.8e-111 406.0 202 98.5
C05p31130 Brassica napus HOM05D003702 ORTHO05D014526 8.2e-104 380.6 191 96.9
BolC5t33656H Brassica oleracea HOM05D003702 ORTHO05D014526 1.3e-93 346.7 177 94.9
C08p39290 Brassica napus HOM05D003702 ORTHO05D014526 3.6e-91 338.6 215 81.4
BolC4t27595H Brassica oleracea HOM05D003702 ORTHO05D014526 2.7e-75 285.8 182 81.9
BolC3t21317H Brassica oleracea HOM05D003702 ORTHO05D014526 2.6e-73 279.3 182 80.8
BcaC01g03963 Brassica carinata HOM05D003702 ORTHO05D014526 1.3e-69 266.9 176 77.8
BcaC06g35173 Brassica carinata HOM05D005941 ORTHO05D007879 3.6e-43 179.1 80 98.8
BcaC07g40935 Brassica carinata HOM05D003702 ORTHO05D014526 1.4e-39 167.2 90 87.8
AL1G27170 Arabidopsis lyrata HOM05D003702 ORTHO05D004653 1.4e-34 150.6 131 61.1
AT1G15110 Arabidopsis thaliana HOM05D003702 ORTHO05D004653 1.4e-34 150.6 134 60.4
Carub.0001s1487 Capsella rubella HOM05D003702 ORTHO05D004653 1.4e-34 150.6 134 60.4
BcaB02g06576 Brassica carinata HOM05D003702 ORTHO05D004653 1.8e-34 150.2 134 60.4
BcaC05g25442 Brassica carinata HOM05D003702 ORTHO05D004653 1.8e-34 150.2 134 60.4
A06p11110 Brassica napus HOM05D003702 ORTHO05D004653 1.8e-34 150.2 134 60.4
C05p13230 Brassica napus HOM05D003702 ORTHO05D004653 1.8e-34 150.2 134 60.4
BolC5t30060H Brassica oleracea HOM05D003702 ORTHO05D004653 1.8e-34 150.2 134 60.4
BraA06t24290Z Brassica rapa HOM05D003702 ORTHO05D004653 1.8e-34 150.2 134 60.4
Sp1g13450 Schrenkiella parvula HOM05D003702 ORTHO05D004653 1.8e-34 150.2 134 60.4
CARHR015630 Cardamine hirsuta HOM05D003702 ORTHO05D004653 2.3e-34 149.8 134 59.7
Thhalv10007726m.g Eutrema salsugineum HOM05D003702 ORTHO05D004653 2.3e-34 149.8 134 59.7
PGR102G2387 Punica granatum HOM05D003702 ORTHO05D004653 6.8e-34 148.3 131 58.8
BcaNung05515 Brassica carinata HOM05D003702 ORTHO05D004653 8.9e-34 147.9 100 73.0
C08p45160 Brassica napus HOM05D003702 ORTHO05D004653 8.9e-34 147.9 100 73.0
BolC8t52064H Brassica oleracea HOM05D003702 ORTHO05D004653 8.9e-34 147.9 100 73.0
BcaB03g14561 Brassica carinata HOM05D003702 ORTHO05D004653 1.5e-33 147.1 100 73.0
A09p61570 Brassica napus HOM05D003702 ORTHO05D004653 1.5e-33 147.1 100 73.0
BraA09t41530Z Brassica rapa HOM05D003702 ORTHO05D004653 1.5e-33 147.1 100 73.0
Atru.chr11.329 Acer truncatum HOM05D003702 ORTHO05D004653 2.6e-33 146.4 131 59.5
Ciclev10015341m.g Citrus clementina HOM05D003702 ORTHO05D004653 2.6e-33 146.4 131 58.8
Hund20721 Selenicereus undatus HOM05D003702 ORTHO05D004653 4.4e-33 145.6 131 58.0
THA.LOC104805051 Tarenaya hassleriana HOM05D003702 ORTHO05D004653 5.8e-33 145.2 131 57.3
CSS0038999 Camellia sinensis var. sinensis HOM05D003702 ORTHO05D004653 7.6e-33 144.8 131 57.3
CSS0044058 Camellia sinensis var. sinensis HOM05D003702 ORTHO05D004653 7.6e-33 144.8 131 57.3
Dinv04909 Davidia involucrata HOM05D003702 ORTHO05D004653 7.6e-33 144.8 131 58.0
Nn4g24020 Nelumbo nucifera HOM05D003702 ORTHO05D004653 7.6e-33 144.8 131 58.8
Gohir.A09G005100 Gossypium hirsutum HOM05D003702 ORTHO05D004653 9.9e-33 144.4 131 58.0
Gohir.D09G004400 Gossypium hirsutum HOM05D003702 ORTHO05D004653 9.9e-33 144.4 131 58.0
Gorai.006G006000 Gossypium raimondii HOM05D003702 ORTHO05D004653 1.3e-32 144.1 131 58.0
HanXRQChr17g0553131 Helianthus annuus HOM05D003702 ORTHO05D004653 1.3e-32 144.1 131 56.5
Thecc.02G215000 Theobroma cacao HOM05D003702 ORTHO05D004653 1.3e-32 144.1 131 58.0
GSVIVG01011808001 Vitis vinifera HOM05D003702 ORTHO05D004653 1.3e-32 144.1 131 58.0
Cfa015818 Carpinus fangiana HOM05D003702 ORTHO05D004653 1.7e-32 143.7 131 58.8
Lj6A750T93 Lonicera japonica HOM05D003702 ORTHO05D004653 1.7e-32 143.7 131 57.3
Nitab4.5_0000350g0060 Nicotiana tabacum HOM05D003702 ORTHO05D004653 1.7e-32 143.7 131 56.5
Nitab4.5_0003886g0040 Nicotiana tabacum HOM05D003702 ORTHO05D004653 1.7e-32 143.7 131 57.3
Sabra08G0095000 Salix brachista HOM05D003702 ORTHO05D004653 1.7e-32 143.7 131 55.7
Sc04g0005900 Simmondsia chinensis HOM05D003702 ORTHO05D004653 1.7e-32 143.7 131 56.5
CsaV3_5G028680 Cucumis sativus L. HOM05D003702 ORTHO05D004653 2.2e-32 143.3 131 55.7
MD13G1033100 Malus domestica HOM05D003702 ORTHO05D004653 2.2e-32 143.3 131 56.5
Manes.14G109300 Manihot esculenta HOM05D003702 ORTHO05D004653 2.2e-32 143.3 131 57.3
Prupe.1G319700 Prunus persica HOM05D003702 ORTHO05D004653 2.2e-32 143.3 131 56.5
TAR371G0966 Trochodendron aralioides HOM05D003702 ORTHO05D004653 2.2e-32 143.3 131 57.3
Aqoxy5G03879 Aquilegia oxysepala HOM05D003702 ORTHO05D004653 2.9e-32 142.9 131 57.3
Duzib268G1865 Durio zibethinus HOM05D003702 ORTHO05D004653 2.9e-32 142.9 131 57.3
Lsat_1_v5_gn_8_41841 Lactuca sativa HOM05D003702 ORTHO05D004653 2.9e-32 142.9 131 55.7
Peaxi162Scf00205g01127 Petunia axillaris HOM05D003702 ORTHO05D004653 2.9e-32 142.9 131 56.5
TWI75G1265 Tripterygium wilfordii HOM05D003702 ORTHO05D004653 2.9e-32 142.9 131 56.5
Aqoxy6G00508 Aquilegia oxysepala HOM05D003702 ORTHO05D004653 3.8e-32 142.5 131 57.3
Cc11_g09310 Coffea canephora HOM05D003702 ORTHO05D004653 3.8e-32 142.5 131 55.7
MD16G1035000 Malus domestica HOM05D003702 ORTHO05D004653 3.8e-32 142.5 131 57.3
Actinidia16697 Actinidia chinensis HOM05D003702 ORTHO05D004653 4.9e-32 142.1 131 58.0
CAN.G1489.18 Capsicum annuum HOM05D003702 ORTHO05D004653 4.9e-32 142.1 131 55.0
Lsat_1_v5_gn_3_56601 Lactuca sativa HOM05D003702 ORTHO05D004653 4.9e-32 142.1 131 55.7
QL01p003075 Quercus lobata HOM05D003702 ORTHO05D004653 4.9e-32 142.1 131 56.5
Ca_30213_v3 Cicer arietinum L. HOM05D003702 ORTHO05D004653 6.4e-32 141.7 131 55.0
MELO3C005332.2 Cucumis melo HOM05D003702 ORTHO05D004653 6.4e-32 141.7 131 55.7
Oeu031392.1 Olea europaea HOM05D003702 ORTHO05D004653 6.4e-32 141.7 131 57.3
PSO017G5274 Papaver somniferum HOM05D003702 ORTHO05D004653 6.4e-32 141.7 131 58.0
PSO478G4444 Papaver somniferum HOM05D003702 ORTHO05D004653 6.4e-32 141.7 131 58.0
Potri.008G126100 Populus trichocarpa HOM05D003702 ORTHO05D004653 6.4e-32 141.7 131 55.7
Sc14g0007250 Simmondsia chinensis HOM05D003702 ORTHO05D004653 6.4e-32 141.7 131 56.5
TPR.G4874 Trifolium pratense HOM05D003702 ORTHO05D004653 6.4e-32 141.7 131 55.0
vmacro10616 Vaccinium macrocarpon HOM05D003702 ORTHO05D004653 6.4e-32 141.7 131 55.7
COL.COLO4_38548 Corchorus olitorius HOM05D003702 ORTHO05D004653 8.4e-32 141.4 131 55.7
Duzib248G1136 Durio zibethinus HOM05D003702 ORTHO05D004653 8.4e-32 141.4 131 57.3
ClCG05G022350 Citrullus lanatus HOM05D003702 ORTHO05D004653 1.1e-31 141.0 134 52.2
MBI10_g06746_MAGBIO Magnolia biondii HOM05D003702 ORTHO05D004653 1.1e-31 141.0 131 55.7
Manes.06G063400 Manihot esculenta HOM05D003702 ORTHO05D004653 1.1e-31 141.0 131 55.7
Nitab4.5_0000881g0100 Nicotiana tabacum HOM05D003702 ORTHO05D004653 1.1e-31 141.0 131 54.2
Nitab4.5_0004597g0050 Nicotiana tabacum HOM05D003702 ORTHO05D004653 1.1e-31 141.0 131 54.2
MSTRG.2203 Avicennia marina HOM05D003702 ORTHO05D004653 1.4e-31 140.6 131 56.5
MSTRG.874 Avicennia marina HOM05D003702 ORTHO05D004653 1.4e-31 140.6 131 56.5
CAN.G139.1 Capsicum annuum HOM05D003702 ORTHO05D004653 1.4e-31 140.6 131 55.0
AUR62002771 Chenopodium quinoa HOM05D003702 ORTHO05D004653 1.4e-31 140.6 100 68.0
Haze_00678 Corylus avellana HOM05D003702 ORTHO05D004653 1.4e-31 140.6 131 58.0
FvH4_4g26430 Fragaria vesca HOM05D003702 ORTHO05D004653 1.4e-31 140.6 131 54.2
FAN07G0957 Fragaria x ananassa HOM05D003702 ORTHO05D004653 1.4e-31 140.6 131 54.2
FAN12G0213 Fragaria x ananassa HOM05D003702 ORTHO05D004653 1.4e-31 140.6 131 54.2
FAN12G3413 Fragaria x ananassa HOM05D003702 ORTHO05D004653 1.4e-31 140.6 131 54.2
FAN17G2320 Fragaria x ananassa HOM05D003702 ORTHO05D004653 1.4e-31 140.6 131 54.2
FAN22G0804 Fragaria x ananassa HOM05D003702 ORTHO05D004653 1.4e-31 140.6 131 54.2
RcHm_v2.0_Chr4g0434061 Rosa chinensis HOM05D003702 ORTHO05D004653 1.4e-31 140.6 131 54.2
Sabra10G0086900 Salix brachista HOM05D003702 ORTHO05D004653 1.4e-31 140.6 131 55.7
Sabra10G0088500 Salix brachista HOM05D003702 ORTHO05D004653 1.4e-31 140.6 131 55.7
CDE06G0787 Ceratophyllum demersum HOM05D003702 ORTHO05D004653 1.9e-31 140.2 131 55.7
AUR62037259 Chenopodium quinoa HOM05D003702 ORTHO05D004653 1.9e-31 140.2 100 67.0
ECA233G3005 Erigeron canadensis HOM05D003702 ORTHO05D004653 1.9e-31 140.2 131 55.0
ATR0691G123 Amborella trichopoda HOM05D003702 ORTHO05D004653 2.4e-31 139.8 131 55.7
CiPaw.05G244900 Carya illinoinensis HOM05D003702 ORTHO05D004653 2.4e-31 139.8 131 54.2
MELO3C012286.2 Cucumis melo HOM05D003702 ORTHO05D004653 2.4e-31 139.8 131 53.4
CsaV3_5G034740 Cucumis sativus L. HOM05D003702 ORTHO05D004653 2.4e-31 139.8 131 53.4
Eucgr.B02865 Eucalyptus grandis HOM05D003702 ORTHO05D004653 2.4e-31 139.8 131 55.0
Lalb_Chr06g0165751 Lupinus albus HOM05D003702 ORTHO05D004653 2.4e-31 139.8 131 54.2
Ah.05g167700 Amaranthus hybridus HOM05D003702 ORTHO05D004653 3.2e-31 139.4 100 66.0
Gohir.A12G141400 Gossypium hirsutum HOM05D003702 ORTHO05D004653 3.2e-31 139.4 131 56.5
Gohir.D12G146300 Gossypium hirsutum HOM05D003702 ORTHO05D004653 3.2e-31 139.4 131 56.5
Gorai.008G157600 Gossypium raimondii HOM05D003702 ORTHO05D004653 3.2e-31 139.4 131 56.5
Potri.010G117500 Populus trichocarpa HOM05D003702 ORTHO05D004653 3.2e-31 139.4 131 55.7
Sed0022429 Sechium edule HOM05D003702 ORTHO05D004653 3.2e-31 139.4 131 55.0
Solyc04g007520.3 Solanum lycopersicum HOM05D003702 ORTHO05D004653 3.2e-31 139.4 131 55.0
Sopen04g002600 Solanum pennellii HOM05D003702 ORTHO05D004653 3.2e-31 139.4 131 55.0
EL10Ac1g01504 Beta vulgaris HOM05D003702 ORTHO05D004653 5.4e-31 138.7 100 67.0
Migut.E00388 Erythranthe guttata HOM05D003702 ORTHO05D004653 5.4e-31 138.7 131 57.3
Migut.L01016 Erythranthe guttata HOM05D003702 ORTHO05D004653 5.4e-31 138.7 131 55.0
Solyc05g008580.3 Solanum lycopersicum HOM05D003702 ORTHO05D004653 5.4e-31 138.7 131 55.0
Sopen05g004420 Solanum pennellii HOM05D003702 ORTHO05D004653 5.4e-31 138.7 131 55.0
PGSC0003DMG400030564 Solanum tuberosum HOM05D003702 ORTHO05D004653 5.4e-31 138.7 131 55.0
Peaxi162Scf00897g00114 Petunia axillaris HOM05D003702 ORTHO05D004653 7.1e-31 138.3 131 55.0
Rhsim09G0102000 Rhododendron simsii HOM05D003702 ORTHO05D004653 7.1e-31 138.3 100 67.0
DCAR_030184 Daucus carota HOM05D003702 ORTHO05D004653 9.2e-31 137.9 131 55.0
Dinv16161 Davidia involucrata HOM05D003702 ORTHO05D004653 9.2e-31 137.9 100 68.0
ECA246G4421 Erigeron canadensis HOM05D003702 ORTHO05D004653 9.2e-31 137.9 131 55.7
HanXRQChr14g0459241 Helianthus annuus HOM05D003702 ORTHO05D004653 9.2e-31 137.9 131 53.4
Lalb_Chr21g0308661 Lupinus albus HOM05D003702 ORTHO05D004653 9.2e-31 137.9 131 54.2
Sed0016261 Sechium edule HOM05D003702 ORTHO05D004653 9.2e-31 137.9 131 55.0
vmacro12220 Vaccinium macrocarpon HOM05D003702 ORTHO05D004653 9.2e-31 137.9 148 50.7
MSTRG.7632 Avicennia marina HOM05D003702 ORTHO05D004653 1.2e-30 137.5 131 55.7
GSVIVG01008367001 Vitis vinifera HOM05D003702 ORTHO05D004653 1.2e-30 137.5 100 67.0
Zm00001eb125990 Zea mays HOM05D003702 ORTHO05D004653 1.2e-30 137.5 131 53.4
CiPaw.06G015200 Carya illinoinensis HOM05D003702 ORTHO05D004653 1.6e-30 137.1 131 54.2
Medtr1g109120 Medicago truncatula HOM05D003702 ORTHO05D004653 1.6e-30 137.1 138 50.7
SalBow8G2252 Salvia bowleyana HOM05D003702 ORTHO05D004653 1.6e-30 137.1 131 54.2
SalBow8G5575 Salvia bowleyana HOM05D003702 ORTHO05D004653 1.6e-30 137.1 131 55.7
arahy.Tifrunner.gnm1.ann1.8F881C Arachis hypogaea HOM05D003702 ORTHO05D004653 2.1e-30 136.7 131 53.4
arahy.Tifrunner.gnm1.ann1.A779NY Arachis hypogaea HOM05D003702 ORTHO05D004653 2.1e-30 136.7 131 53.4
ClCG01G006000 Citrullus lanatus HOM05D003702 ORTHO05D004653 2.1e-30 136.7 100 64.0
Lalb_Chr02g0145651 Lupinus albus HOM05D003702 ORTHO05D004653 2.7e-30 136.3 131 54.2
Glyma.10G268300 Glycine max HOM05D003702 ORTHO05D004653 4.6e-30 135.6 131 52.7
Glyma.20G122800 Glycine max HOM05D003702 ORTHO05D004653 4.6e-30 135.6 131 52.7
Phvul.007G034000 Phaseolus vulgaris HOM05D003702 ORTHO05D004653 4.6e-30 135.6 131 52.7
Lj5g0010985 Lotus japonicus HOM05D003702 ORTHO05D004653 6.0e-30 135.2 131 51.9
VMungo0720G1815 Vigna mungo HOM05D003702 ORTHO05D004653 6.0e-30 135.2 134 51.5
Aa31LG1G40 Aethionema arabicum HOM05D003702 ORTHO05D004653 7.8e-30 134.8 91 70.3
Zm00001eb334750 Zea mays HOM05D003702 ORTHO05D004653 7.8e-30 134.8 131 52.7
Psat6g222840 Pisum sativum HOM05D003702 ORTHO05D004653 1.0e-29 134.4 100 63.0
Sed0021449 Sechium edule HOM05D003702 ORTHO05D004653 1.0e-29 134.4 131 51.9
CDE07G1100 Ceratophyllum demersum HOM05D003702 ORTHO05D004653 2.3e-29 133.3 100 64.0
Oeu036128.1 Olea europaea HOM05D003702 ORTHO05D004653 5.1e-29 132.1 131 53.4
HPP92_026069 Vanilla planifolia HOM05D003702 ORTHO05D004653 5.1e-29 132.1 131 51.9
unitig_746.g26864 Utricularia gibba HOM05D003702 ORTHO05D004653 1.1e-28 131.0 131 53.4
Zm00001eb343120 Zea mays HOM05D003702 ORTHO05D004653 4.3e-28 129.0 131 51.1
Os05g0554400 Oryza sativa ssp. japonica HOM05D003702 ORTHO05D004653 5.6e-28 128.6 131 51.1
HPP92_008281 Vanilla planifolia HOM05D003702 ORTHO05D004653 5.6e-28 128.6 100 61.0
Zm00001eb295120 Zea mays HOM05D003702 ORTHO05D004653 8.1e-27 124.8 131 49.6
C04p61090 Brassica napus HOM05D038349 ORTHO05D014526 1.4e-26 124.0 141 51.1
BcaB01g00253 Brassica carinata HOM05D038349 ORTHO05D092297 2.4e-26 123.2 125 58.4
Duzib251G0696 Durio zibethinus HOM05D003702 ORTHO05D004653 2.4e-26 123.2 96 63.5
C03p89980 Brassica napus HOM05D038349 ORTHO05D014526 1.3e-24 117.5 141 49.6
SMO116G0260 Selaginella moellendorffii HOM05D003702 ORTHO05D004653 2.9e-24 116.3 131 48.1
SGA_v2.0_scaffold14G06919 Striga asiatica HOM05D003702 ORTHO05D004653 2.9e-24 116.3 131 48.1
HPP92_021847 Vanilla planifolia HOM05D003702 ORTHO05D004653 1.9e-23 113.6 97 57.7
Pp3c4_15740 Physcomitrium patens HOM05D003702 ORTHO05D004653 2.4e-23 113.2 100 57.0
SGA_v2.0_scaffold170G38819 Striga asiatica HOM05D003702 ORTHO05D004653 3.5e-22 109.4 102 56.9
BolC6t37169H Brassica oleracea HOM05D003702 ORTHO05D019976 4.6e-22 109.0 92 56.5
AagrBONN_evm.TU.Sc2ySwM_117.3898 Anthoceros agrestis HOM05D003702 ORTHO05D004653 3.9e-21 105.9 131 45.0
Pp3c26_4170 Physcomitrium patens HOM05D003702 ORTHO05D004653 2.5e-20 103.2 132 42.4
Mapoly0057s0110 Marchantia polymorpha HOM05D003702 ORTHO05D004653 3.6e-19 99.4 100 50.0
BolC8t48089H Brassica oleracea HOM05D019496 ORTHO05D019976 9.6e-12 74.7 129 41.9
BraA01t02377Z Brassica rapa HOM05D062043 ORTHO05D014526 2.8e-11 73.2 52 71.2
BraA05t19599Z Brassica rapa HOM05D062043 ORTHO05D014526 2.8e-11 73.2 52 71.2
BcaC02g07984 Brassica carinata HOM05D003702 ORTHO05D014526 1.5e-09 67.4 30 83.3
BcaC01g05019 Brassica carinata HOM05D019496 ORTHO05D019976 5.5e-07 58.9 27 85.2


User provided reference genes

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