Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p18300 Brassica napus HOM05D005627 ORTHO05D018690 2.7e-68 261.9 135 100.0
C09p26130 Brassica napus HOM05D005627 ORTHO05D018690 1.0e-64 250.0 135 94.8
BcaC04g21890 Brassica carinata HOM05D005627 ORTHO05D018690 8.9e-64 246.9 135 94.1
BraA06t25317Z Brassica rapa HOM05D005627 ORTHO05D013519 1.5e-58 229.6 135 86.7
BraA06t25407Z Brassica rapa HOM05D005627 ORTHO05D018690 2.5e-58 228.8 135 88.9
BolC2t11142H Brassica oleracea HOM05D005627 ORTHO05D018690 2.8e-57 225.3 132 89.4
BcaC06g35245 Brassica carinata HOM05D005627 ORTHO05D018690 1.7e-54 216.1 113 98.2
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 4.9e-54 214.5 122 88.5
C07p12160 Brassica napus HOM05D005627 ORTHO05D013519 2.0e-52 209.1 122 88.5
C08p05920 Brassica napus HOM05D005627 ORTHO05D018690 2.7e-52 208.8 131 84.0
BolC7t42340H Brassica oleracea HOM05D005627 ORTHO05D018690 5.8e-47 191.0 100 96.0
BolC9t55516H Brassica oleracea HOM05D005627 ORTHO05D013519 7.3e-42 174.1 135 74.1
BolC6t37278H Brassica oleracea HOM05D005627 ORTHO05D040269 8.1e-41 170.6 135 72.6
C06p20900 Brassica napus HOM05D005627 ORTHO05D013519 1.8e-40 169.5 135 71.1
C07p09730 Brassica napus HOM05D005627 ORTHO05D041386 2.6e-39 165.6 91 90.1
BolC7t41687H Brassica oleracea HOM05D005627 ORTHO05D013519 1.7e-38 162.9 135 69.6
BolC7t41411H Brassica oleracea HOM05D005627 ORTHO05D041386 2.9e-38 162.2 91 89.0
BolC7t41683H Brassica oleracea HOM05D005627 ORTHO05D013519 1.9e-37 159.5 135 68.1
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 8.6e-35 150.6 117 60.7
BolC6t38917H Brassica oleracea HOM05D005627 ORTHO05D013519 3.6e-33 145.2 121 66.9
C07p12190 Brassica napus HOM05D005627 ORTHO05D013519 4.7e-33 144.8 122 67.2
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 4.0e-32 141.7 133 56.4
BcaB01g01859 Brassica carinata HOM05D005627 ORTHO05D013519 6.9e-32 141.0 135 56.3
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 1.5e-31 139.8 122 58.2
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 2.6e-31 139.0 122 57.4
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 3.4e-31 138.7 133 55.6
BraA06t25653Z Brassica rapa HOM05D005627 ORTHO05D013519 9.9e-31 137.1 112 58.9
C06p38190 Brassica napus HOM05D005627 ORTHO05D040269 4.9e-30 134.8 125 65.6
BcaB04g18138 Brassica carinata HOM05D005627 ORTHO05D013519 1.0e-27 127.1 129 55.8
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-25 119.8 98 55.1
BraA01t02229Z Brassica rapa HOM05D005627 ORTHO05D013519 1.6e-25 119.8 98 55.1
BolC8t47414H Brassica oleracea HOM05D005627 ORTHO05D013519 4.8e-25 118.2 106 61.3
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 3.1e-24 115.5 130 50.0
C01p21260 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-20 103.2 112 48.2
BraA02t07754Z Brassica rapa HOM05D005627 ORTHO05D013519 2.5e-18 95.9 89 53.9
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-17 93.6 81 56.8
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 8.1e-17 90.9 143 35.7
BcaC06g35917 Brassica carinata HOM05D005627 ORTHO05D011976 5.3e-16 88.2 143 35.0
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 5.3e-16 88.2 143 35.0
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 6.9e-16 87.8 143 35.0
BcaC03g17142 Brassica carinata HOM05D005627 ORTHO05D011976 9.0e-16 87.4 143 35.0
BolC2t11140H Brassica oleracea HOM05D005627 ORTHO05D011976 9.0e-16 87.4 143 35.0
BcaB02g10994 Brassica carinata HOM05D005627 ORTHO05D011976 2.0e-15 86.3 139 35.3
BcaNung05731 Brassica carinata HOM05D005627 ORTHO05D011976 3.4e-15 85.5 143 33.6
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 3.4e-15 85.5 136 34.6
BcaC07g37194 Brassica carinata HOM05D005627 ORTHO05D011976 4.5e-15 85.1 137 34.3
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 1.3e-14 83.6 121 34.7
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 2.2e-14 82.8 121 34.7
A06p22330 Brassica napus HOM05D005627 ORTHO05D011976 2.2e-14 82.8 143 32.9
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 4.9e-14 81.6 143 33.6
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 1.1e-13 80.5 143 33.6
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 1.9e-13 79.7 143 32.9
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 2.4e-13 79.3 123 36.6
C02p24050 Brassica napus HOM05D001038 ORTHO05D000395 2.4e-13 79.3 117 42.7
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 4.2e-13 78.6 121 37.2
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 5.5e-13 78.2 122 32.8
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 7.1e-13 77.8 143 32.9
BcaC06g35675 Brassica carinata HOM05D005627 ORTHO05D011976 9.3e-13 77.4 143 32.2
C05p37190 Brassica napus HOM05D005627 ORTHO05D024275 9.3e-13 77.4 136 31.6
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 9.3e-13 77.4 121 35.5
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 1.2e-12 77.0 123 35.8
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 1.2e-12 77.0 123 35.8
BcaB04g17888 Brassica carinata HOM05D005627 ORTHO05D017568 7.9e-12 74.3 122 31.1
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 1.0e-11 73.9 111 36.0
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 1.8e-11 73.2 123 33.3
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 1.8e-11 73.2 123 33.3
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 1.8e-11 73.2 123 33.3
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 2.3e-11 72.8 114 37.7
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 3.0e-11 72.4 109 36.7
BolC8t47418H Brassica oleracea HOM05D005627 ORTHO05D042654 3.0e-11 72.4 69 43.5
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 8.7e-11 70.9 136 29.4
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 8.7e-11 70.9 136 29.4
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 8.7e-11 70.9 136 29.4
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 8.7e-11 70.9 119 34.5
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 8.7e-11 70.9 120 34.2
BolC9t55879H Brassica oleracea HOM05D005627 ORTHO05D009842 1.9e-10 69.7 90 37.8
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 2.5e-10 69.3 120 30.8
BolC9t56845H Brassica oleracea HOM05D006289 ORTHO05D027118 7.4e-10 67.8 116 28.4
C09p39660 Brassica napus HOM05D006289 ORTHO05D027118 9.6e-10 67.4 116 28.4
BcaB08g34781 Brassica carinata HOM05D005627 ORTHO05D009842 1.6e-09 66.6 115 31.3
BcaC08g46023 Brassica carinata HOM05D005627 ORTHO05D011976 1.6e-09 66.6 120 32.5
A09p28360 Brassica napus HOM05D006289 ORTHO05D027118 1.6e-09 66.6 116 26.7
BraA01t02126Z Brassica rapa HOM05D005627 ORTHO05D021730 1.6e-09 66.6 121 33.1
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 2.8e-09 65.9 124 31.5
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 2.8e-09 65.9 124 31.5
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 2.8e-09 65.9 124 31.5
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 3.7e-09 65.5 123 30.9
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 3.7e-09 65.5 115 30.4
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 3.7e-09 65.5 111 30.6
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 3.7e-09 65.5 111 30.6
C09p12390 Brassica napus HOM05D005627 ORTHO05D032198 6.2e-09 64.7 126 32.5
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 8.2e-09 64.3 115 29.6
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 1.1e-08 63.9 69 39.1
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 1.1e-08 63.9 107 30.8
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 1.4e-08 63.5 137 27.7
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 1.4e-08 63.5 105 34.3
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 1.4e-08 63.5 128 28.9
BolC6t38918H Brassica oleracea HOM05D005627 ORTHO05D011976 1.4e-08 63.5 121 33.9
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 1.4e-08 63.5 105 34.3
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 1.4e-08 63.5 137 27.7
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 1.8e-08 63.2 115 28.7
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 1.8e-08 63.2 115 29.6
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 2.4e-08 62.8 111 31.5
BcaC06g35244 Brassica carinata HOM05D005627 ORTHO05D011976 2.4e-08 62.8 140 32.1
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 2.4e-08 62.8 111 29.7
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 2.4e-08 62.8 102 31.4
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 2.4e-08 62.8 151 25.2
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 3.1e-08 62.4 126 31.7
BcaB01g01600 Brassica carinata HOM05D009418 ORTHO05D092871 3.1e-08 62.4 110 31.8
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 5.3e-08 61.6 111 29.7
C02p24040 Brassica napus HOM05D006289 ORTHO05D009842 6.9e-08 61.2 137 27.7
BolC4t26246H Brassica oleracea HOM05D008838 ORTHO05D017574 6.9e-08 61.2 105 32.4
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 6.9e-08 61.2 121 26.4
C01p11540 Brassica napus HOM05D005627 ORTHO05D009842 9.0e-08 60.8 94 31.9
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 1.2e-07 60.5 137 27.7
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 2.0e-07 59.7 102 28.4
A04p11360 Brassica napus HOM05D005627 ORTHO05D019933 2.6e-07 59.3 121 25.6
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 2.6e-07 59.3 111 29.7
BraA04t16798Z Brassica rapa HOM05D005627 ORTHO05D019933 2.6e-07 59.3 121 25.6
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 3.4e-07 58.9 115 27.8
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 3.4e-07 58.9 115 27.8
C07p13430 Brassica napus HOM05D008838 ORTHO05D027188 3.4e-07 58.9 114 30.7
BolC7t41838H Brassica oleracea HOM05D008838 ORTHO05D027188 3.4e-07 58.9 114 30.7
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 4.5e-07 58.5 145 27.6
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 4.5e-07 58.5 121 23.1
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 4.5e-07 58.5 98 32.7
BcaC08g44170 Brassica carinata HOM05D009418 ORTHO05D017574 5.8e-07 58.2 105 32.4
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 5.8e-07 58.2 105 32.4
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 7.6e-07 57.8 126 29.4
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 7.6e-07 57.8 126 29.4
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 1.0e-06 57.4 127 26.8
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 1.0e-06 57.4 115 27.8
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 1.0e-06 57.4 121 24.0
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-06 57.4 66 34.8
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 1.0e-06 57.4 126 30.2
BolC9t59378H Brassica oleracea HOM05D006289 ORTHO05D017568 1.0e-06 57.4 115 27.8
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 1.0e-06 57.4 66 34.8
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 1.3e-06 57.0 115 27.8
BcaC04g19240 Brassica carinata HOM05D006289 ORTHO05D017568 1.3e-06 57.0 115 27.8
BcaC09g49023 Brassica carinata HOM05D006289 ORTHO05D018698 1.3e-06 57.0 126 29.4
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 1.3e-06 57.0 102 31.4
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 1.7e-06 56.6 137 27.0
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 1.7e-06 56.6 75 34.7
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 1.7e-06 56.6 75 34.7
BraA05t19813Z Brassica rapa HOM05D008838 ORTHO05D027188 1.7e-06 56.6 106 30.2
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 1.7e-06 56.6 137 27.0
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 2.2e-06 56.2 65 33.8
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 2.9e-06 55.8 137 25.5
BraA04t18509Z Brassica rapa HOM05D005627 ORTHO05D021837 2.9e-06 55.8 65 32.3
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 3.8e-06 55.5 111 27.9
BcaB06g27480 Brassica carinata HOM05D008838 ORTHO05D021876 4.9e-06 55.1 114 28.1
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 4.9e-06 55.1 117 25.6
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 4.9e-06 55.1 115 27.0
BolC7t41167H Brassica oleracea HOM05D005627 ORTHO05D011792 4.9e-06 55.1 98 29.6
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 4.9e-06 55.1 111 30.6
BcaB03g16579 Brassica carinata HOM05D006289 ORTHO05D019933 8.4e-06 54.3 121 22.3
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 8.4e-06 54.3 139 30.2
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 8.4e-06 54.3 129 28.7
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 8.4e-06 54.3 65 33.8
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 8.4e-06 54.3 147 28.6
C03p66840 Brassica napus HOM05D006289 ORTHO05D017568 8.4e-06 54.3 115 28.7
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 8.4e-06 54.3 147 28.6


User provided reference genes

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