Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p17090 Brassica napus HOM05D001861 ORTHO05D001868 2.5e-105 385.6 214 100.0
A03p33740 Brassica napus HOM05D001861 ORTHO05D001868 2.1e-67 259.6 182 88.5
C09p36090 Brassica napus HOM05D001861 ORTHO05D001868 1.3e-64 250.4 152 95.4
BolC9t56449H Brassica oleracea HOM05D001861 ORTHO05D001868 1.3e-64 250.4 152 95.4
BcaC04g21063 Brassica carinata HOM05D001861 ORTHO05D001868 8.0e-51 204.5 225 60.0
BcaC06g35352 Brassica carinata HOM05D001861 ORTHO05D001868 6.3e-48 194.9 218 58.3
BcaB06g28683 Brassica carinata HOM05D001861 ORTHO05D001868 6.2e-27 125.2 96 77.1
BcaC02g07830 Brassica carinata HOM05D001861 ORTHO05D001868 4.0e-26 122.5 101 75.2
C04p62860 Brassica napus HOM05D001861 ORTHO05D001868 4.0e-26 122.5 101 75.2
BolC4t27769H Brassica oleracea HOM05D001861 ORTHO05D001868 4.0e-26 122.5 101 75.2
AL4G29070 Arabidopsis lyrata HOM05D001861 ORTHO05D001868 6.8e-26 121.7 78 75.6
Thhalv10017083m.g Eutrema salsugineum HOM05D001861 ORTHO05D001868 5.8e-25 118.6 99 75.8
AT2G33400 Arabidopsis thaliana HOM05D001861 ORTHO05D001868 7.5e-25 118.2 78 74.4
Carub.0004s1503 Capsella rubella HOM05D001861 ORTHO05D001868 1.3e-24 117.5 77 74.0
Sp4g15720 Schrenkiella parvula HOM05D001861 ORTHO05D001868 4.9e-24 115.5 69 82.6
A04p25700 Brassica napus HOM05D001861 ORTHO05D001868 3.5e-22 109.4 79 74.7
BraA04t18074Z Brassica rapa HOM05D001861 ORTHO05D001868 1.3e-21 107.5 78 74.4
BolC7t42212H Brassica oleracea HOM05D001861 ORTHO05D033603 4.3e-20 102.4 80 96.2
C07p31310 Brassica napus HOM05D001861 ORTHO05D033603 4.7e-19 99.0 47 97.9
Aa31LG5G3890 Aethionema arabicum HOM05D001861 ORTHO05D001868 6.2e-19 98.6 104 62.5
CARHR127410 Cardamine hirsuta HOM05D001861 ORTHO05D001868 1.8e-18 97.1 65 76.9
A05p12120 Brassica napus HOM05D001861 ORTHO05D001868 1.2e-17 94.4 82 73.2
BraA05t20156Z Brassica rapa HOM05D001861 ORTHO05D001868 1.2e-17 94.4 82 73.2
BcaC02g11427 Brassica carinata HOM05D001861 ORTHO05D001868 3.4e-17 92.8 61 77.0
C04p15690 Brassica napus HOM05D001861 ORTHO05D001868 3.4e-17 92.8 61 77.0
BolC4t23137H Brassica oleracea HOM05D001861 ORTHO05D001868 3.4e-17 92.8 61 77.0
BcaB02g10559 Brassica carinata HOM05D001861 ORTHO05D001868 2.2e-16 90.1 61 73.8
BolC7t43672H Brassica oleracea HOM05D001861 ORTHO05D033603 5.4e-15 85.5 55 90.9
THA.LOC104815999 Tarenaya hassleriana HOM05D001861 ORTHO05D001868 1.9e-12 77.0 64 60.9
THA.LOC104801071 Tarenaya hassleriana HOM05D001861 ORTHO05D001868 2.9e-08 63.2 64 50.0
Gohir.A10G108300 Gossypium hirsutum HOM05D001861 ORTHO05D001868 9.3e-07 58.2 92 35.9
Manes.15G044200 Manihot esculenta HOM05D001861 ORTHO05D001868 9.3e-07 58.2 66 50.0
CSS0000256 Camellia sinensis var. sinensis HOM05D001861 ORTHO05D001868 4.6e-06 55.8 59 50.8
Actinidia37543 Actinidia chinensis HOM05D001861 ORTHO05D001868 6.0e-06 55.5 63 49.2


User provided reference genes

Program Settings