Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p16900 Brassica napus HOM05D003649 ORTHO05D040526 7.7e-43 176.8 92 100.0
BolC7t42195H Brassica oleracea HOM05D003649 ORTHO05D040526 2.9e-42 174.9 92 98.9
BcaB07g32813 Brassica carinata HOM05D003649 ORTHO05D004498 2.7e-11 72.0 81 53.1
Aa31LG2G14410 Aethionema arabicum HOM05D003649 ORTHO05D004498 7.8e-11 70.5 81 50.6
BcaB03g13795 Brassica carinata HOM05D003649 ORTHO05D004498 7.8e-11 70.5 81 51.9
A07p09400 Brassica napus HOM05D003649 ORTHO05D004498 7.8e-11 70.5 81 51.9
C07p14470 Brassica napus HOM05D003649 ORTHO05D004498 7.8e-11 70.5 81 51.9
BraA07t28735Z Brassica rapa HOM05D003649 ORTHO05D004498 7.8e-11 70.5 81 51.9
Sp1g27340 Schrenkiella parvula HOM05D003649 ORTHO05D004498 7.8e-11 70.5 81 51.9
BolC7t41946H Brassica oleracea HOM05D003649 ORTHO05D004498 1.0e-10 70.1 84 51.2
CARHR286950 Cardamine hirsuta HOM05D003649 ORTHO05D004498 1.3e-10 69.7 91 50.5
Thhalv10007604m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 2.3e-10 68.9 81 51.9
MD10G1195400 Malus domestica HOM05D003649 ORTHO05D004498 2.3e-10 68.9 83 47.0
Carub.0001s2998 Capsella rubella HOM05D003649 ORTHO05D004498 3.8e-10 68.2 94 45.7
AT1G31660 Arabidopsis thaliana HOM05D003649 ORTHO05D004498 1.1e-09 66.6 94 45.7
Eucgr.F01411 Eucalyptus grandis HOM05D003649 ORTHO05D004498 5.6e-09 64.3 87 43.7
Manes.14G150400 Manihot esculenta HOM05D003649 ORTHO05D004498 5.6e-09 64.3 84 44.0
Manes.14G152600 Manihot esculenta HOM05D003649 ORTHO05D004498 5.6e-09 64.3 84 44.0
Prupe.4G148600 Prunus persica HOM05D003649 ORTHO05D004498 5.6e-09 64.3 89 42.7
Aqoxy1G02521 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 1.2e-08 63.2 84 42.9
Hund24921 Selenicereus undatus HOM05D003649 ORTHO05D004498 1.6e-08 62.8 81 45.7
Oeu058434.1 Olea europaea HOM05D003649 ORTHO05D004498 2.8e-08 62.0 84 44.0
Sed0023018 Sechium edule HOM05D003649 ORTHO05D004498 2.8e-08 62.0 89 43.8
Cc05_g10190 Coffea canephora HOM05D003649 ORTHO05D004498 3.6e-08 61.6 83 42.2
Sabra16G0258400 Salix brachista HOM05D003649 ORTHO05D004498 3.6e-08 61.6 84 41.7
Cfa011266 Carpinus fangiana HOM05D003649 ORTHO05D004498 4.7e-08 61.2 89 39.3
AUR62036018 Chenopodium quinoa HOM05D003649 ORTHO05D004498 4.7e-08 61.2 84 41.7
Haze_18856 Corylus avellana HOM05D003649 ORTHO05D004498 4.7e-08 61.2 83 41.0
MBI17_g43195_MAGBIO Magnolia biondii HOM05D003649 ORTHO05D004498 6.1e-08 60.8 83 41.0
Potri.001G394000 Populus trichocarpa HOM05D003649 ORTHO05D004498 6.1e-08 60.8 84 41.7
Gohir.D07G116200 Gossypium hirsutum HOM05D003649 ORTHO05D004498 8.0e-08 60.5 81 43.2
Gorai.001G124600 Gossypium raimondii HOM05D003649 ORTHO05D004498 8.0e-08 60.5 81 43.2
Potri.011G112500 Populus trichocarpa HOM05D003649 ORTHO05D004498 8.0e-08 60.5 84 41.7
SGA_v2.0_scaffold73G24356 Striga asiatica HOM05D003649 ORTHO05D004498 8.0e-08 60.5 81 44.4
CANSAT01G2347 Cannabis sativa HOM05D003649 ORTHO05D004498 1.0e-07 60.1 83 41.0
PSO541G1065 Papaver somniferum HOM05D003649 ORTHO05D004498 1.0e-07 60.1 86 41.9
PSO675G2950 Papaver somniferum HOM05D003649 ORTHO05D004498 1.0e-07 60.1 86 41.9
PGR142G4312 Punica granatum HOM05D003649 ORTHO05D004498 1.0e-07 60.1 83 43.4
QL02p065039 Quercus lobata HOM05D003649 ORTHO05D004498 1.0e-07 60.1 83 42.2
CiPaw.08G013900 Carya illinoinensis HOM05D003649 ORTHO05D004498 1.4e-07 59.7 83 41.0
Haze_02513 Corylus avellana HOM05D003649 ORTHO05D004498 1.4e-07 59.7 83 41.0
CsaV3_7G025330 Cucumis sativus L. HOM05D003649 ORTHO05D004498 1.4e-07 59.7 86 43.0
Hma1.2p1_0505F.1_g168130 Hydrangea macrophylla HOM05D003649 ORTHO05D004498 1.4e-07 59.7 83 43.4
Os09g0352400 Oryza sativa ssp. japonica HOM05D003649 ORTHO05D004498 1.4e-07 59.7 84 45.2
EL10Ac3g06484 Beta vulgaris HOM05D003649 ORTHO05D004498 1.8e-07 59.3 81 43.2
CSS0028028 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 1.8e-07 59.3 83 38.6
Duzib168G1903 Durio zibethinus HOM05D003649 ORTHO05D004498 1.8e-07 59.3 83 41.0
Glyma.05G087100 Glycine max HOM05D003649 ORTHO05D004498 1.8e-07 59.3 89 39.3
Gohir.A07G112700 Gossypium hirsutum HOM05D003649 ORTHO05D004498 1.8e-07 59.3 81 43.2
GSVIVG01011050001 Vitis vinifera HOM05D003649 ORTHO05D004498 1.8e-07 59.3 95 34.7
EL10Ac3g06580 Beta vulgaris HOM05D003649 ORTHO05D004498 2.3e-07 58.9 81 43.2
CSS0018218 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 2.3e-07 58.9 89 37.1
Glyma.03G190900 Glycine max HOM05D003649 ORTHO05D004498 2.3e-07 58.9 89 40.4
Medtr5g025980 Medicago truncatula HOM05D003649 ORTHO05D004498 2.3e-07 58.9 89 41.6
Phvul.004G052800 Phaseolus vulgaris HOM05D003649 ORTHO05D004498 2.3e-07 58.9 89 39.3
SalBow5G3252 Salvia bowleyana HOM05D003649 ORTHO05D004498 2.3e-07 58.9 80 46.2
SalBow6G0551 Salvia bowleyana HOM05D003649 ORTHO05D004498 2.3e-07 58.9 80 46.2
SalBow8G0566 Salvia bowleyana HOM05D003649 ORTHO05D004498 2.3e-07 58.9 80 46.2
MSTRG.6707 Avicennia marina HOM05D003649 ORTHO05D004498 3.0e-07 58.5 83 42.2
CANSAT54G0397 Cannabis sativa HOM05D003649 ORTHO05D004498 3.0e-07 58.5 83 39.8
MELO3C024126.2 Cucumis melo HOM05D003649 ORTHO05D004498 4.0e-07 58.2 86 41.9
Pp3c14_4070 Physcomitrium patens HOM05D003649 ORTHO05D004498 4.0e-07 58.2 84 40.5
vmacro10596 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 5.2e-07 57.8 83 41.0
arahy.Tifrunner.gnm1.ann1.2990BW Arachis hypogaea HOM05D003649 ORTHO05D004498 6.8e-07 57.4 89 39.3
A09p34660 Brassica napus HOM05D003649 ORTHO05D004498 6.8e-07 57.4 72 50.0
Ca_25060_v3 Cicer arietinum L. HOM05D003649 ORTHO05D004498 6.8e-07 57.4 94 40.4
DCAR_002270 Daucus carota HOM05D003649 ORTHO05D004498 6.8e-07 57.4 89 39.3
Lalb_Chr21g0316901 Lupinus albus HOM05D003649 ORTHO05D004498 6.8e-07 57.4 86 40.7
Rhsim09G0104200 Rhododendron simsii HOM05D003649 ORTHO05D004498 6.8e-07 57.4 83 39.8
Sc26g0001160 Simmondsia chinensis HOM05D003649 ORTHO05D004498 6.8e-07 57.4 84 41.7
COL.COLO4_24336 Corchorus olitorius HOM05D003649 ORTHO05D004498 8.9e-07 57.0 83 41.0
Lj2g0021753 Lotus japonicus HOM05D003649 ORTHO05D004498 8.9e-07 57.0 89 39.3
TPR.G34458 Trifolium pratense HOM05D003649 ORTHO05D004498 8.9e-07 57.0 86 43.0
GSVIVG01038352001 Vitis vinifera HOM05D003649 ORTHO05D004498 8.9e-07 57.0 83 37.3
Ah.13g074570 Amaranthus hybridus HOM05D003649 ORTHO05D004498 1.2e-06 56.6 81 42.0
Ciclev10023274m.g Citrus clementina HOM05D003649 ORTHO05D004498 1.5e-06 56.2 83 41.0
Pp3c10_5710 Physcomitrium patens HOM05D003649 ORTHO05D004498 1.5e-06 56.2 84 40.5
SMO358G0130 Selaginella moellendorffii HOM05D003649 ORTHO05D004498 1.5e-06 56.2 89 39.3
Atru.chr3.3291 Acer truncatum HOM05D003649 ORTHO05D004498 2.0e-06 55.8 81 42.0
Aqoxy5G01320 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 2.0e-06 55.8 84 38.1
THA.LOC104814384 Tarenaya hassleriana HOM05D003649 ORTHO05D004498 2.0e-06 55.8 86 39.5
BraA09t39000Z Brassica rapa HOM05D003649 ORTHO05D004498 2.6e-06 55.5 72 50.0
RcHm_v2.0_Chr5g0027651 Rosa chinensis HOM05D003649 ORTHO05D004498 2.6e-06 55.5 83 42.2
unitig_748.g7599 Utricularia gibba HOM05D003649 ORTHO05D004498 2.6e-06 55.5 80 45.0
Atru.chr3.2262 Acer truncatum HOM05D003649 ORTHO05D004498 3.4e-06 55.1 84 41.7
Atru.chr3.2268 Acer truncatum HOM05D003649 ORTHO05D004498 3.4e-06 55.1 84 41.7
ATR1132G059 Amborella trichopoda HOM05D003649 ORTHO05D004498 3.4e-06 55.1 80 41.2
ClCG09G009520 Citrullus lanatus HOM05D003649 ORTHO05D004498 3.4e-06 55.1 80 43.8
ECA236G2713 Erigeron canadensis HOM05D003649 ORTHO05D004498 3.4e-06 55.1 89 38.2
CDE06G0350 Ceratophyllum demersum HOM05D003649 ORTHO05D004498 4.4e-06 54.7 80 42.5
Thecc.09G274600 Theobroma cacao HOM05D003649 ORTHO05D004498 4.4e-06 54.7 81 40.7
TPR.G9666 Trifolium pratense HOM05D003649 ORTHO05D004498 4.4e-06 54.7 79 43.0
FvH4_3g16580 Fragaria vesca HOM05D003649 ORTHO05D004498 5.7e-06 54.3 81 44.4
FAN21G3990 Fragaria x ananassa HOM05D003649 ORTHO05D004498 5.7e-06 54.3 81 44.4
FAN25G2823 Fragaria x ananassa HOM05D003649 ORTHO05D004498 5.7e-06 54.3 81 44.4
Actinidia14919 Actinidia chinensis HOM05D003649 ORTHO05D004498 7.5e-06 53.9 89 36.0
TWI38G0227 Tripterygium wilfordii HOM05D003649 ORTHO05D004498 7.5e-06 53.9 81 42.0
Migut.J00669 Erythranthe guttata HOM05D003649 ORTHO05D004498 9.8e-06 53.5 83 39.8
HanXRQChr13g0424451 Helianthus annuus HOM05D003649 ORTHO05D004498 9.8e-06 53.5 83 39.8


User provided reference genes

Program Settings