Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p16370 Brassica napus HOM05D001425 ORTHO05D001272 1.7e-76 289.3 151 100.0
BolC7t42131H Brassica oleracea HOM05D001425 ORTHO05D001272 1.7e-76 289.3 151 100.0
BcaC06g35421 Brassica carinata HOM05D001425 ORTHO05D001272 1.5e-72 276.2 151 96.7
A07p10760 Brassica napus HOM05D001425 ORTHO05D001272 1.9e-70 269.2 151 94.0
BraA07t28870Z Brassica rapa HOM05D001425 ORTHO05D001272 3.5e-69 265.0 151 92.7
Carub.0001s2748 Capsella rubella HOM05D001425 ORTHO05D001272 2.1e-53 212.6 148 79.7
BcaB03g13893 Brassica carinata HOM05D001425 ORTHO05D001272 1.8e-52 209.5 148 79.1
AT1G29270 Arabidopsis thaliana HOM05D001425 ORTHO05D001272 2.4e-49 199.1 148 75.7
Sp1g25200 Schrenkiella parvula HOM05D001425 ORTHO05D001272 4.0e-49 198.4 148 76.4
AL1G43060 Arabidopsis lyrata HOM05D001425 ORTHO05D001272 3.2e-46 188.7 148 72.3
Thhalv10009779m.g Eutrema salsugineum HOM05D001425 ORTHO05D001272 2.1e-45 186.0 148 69.6
CARHR028590 Cardamine hirsuta HOM05D001425 ORTHO05D001272 8.5e-31 137.5 84 79.8
THA.LOC104812642 Tarenaya hassleriana HOM05D001425 ORTHO05D001272 3.9e-28 128.6 156 54.5
Aa31LG6G6260 Aethionema arabicum HOM05D001425 ORTHO05D001272 4.4e-27 125.2 116 62.9
THA.LOC104820606 Tarenaya hassleriana HOM05D001425 ORTHO05D001272 2.5e-22 109.4 150 50.0
MELO3C007201.2 Cucumis melo HOM05D001425 ORTHO05D001272 3.3e-19 99.0 155 39.4
Ciclev10016999m.g Citrus clementina HOM05D001425 ORTHO05D001272 7.4e-19 97.8 152 41.4
CsaV3_6G051020 Cucumis sativus L. HOM05D001425 ORTHO05D001272 6.3e-18 94.7 155 38.1
ClCG01G023870 Citrullus lanatus HOM05D001425 ORTHO05D001272 1.1e-17 94.0 155 41.3
Thecc.06G166200 Theobroma cacao HOM05D001425 ORTHO05D001272 2.0e-16 89.7 153 40.5
Gorai.009G160900 Gossypium raimondii HOM05D001425 ORTHO05D001272 4.5e-16 88.6 155 38.1
Duzib160G0077 Durio zibethinus HOM05D001425 ORTHO05D001272 5.9e-16 88.2 153 37.9
A02p35250 Brassica napus HOM05D003011 ORTHO05D003330 7.7e-16 87.8 59 78.0
Manes.16G038700 Manihot esculenta HOM05D001425 ORTHO05D001272 1.0e-15 87.4 154 42.2
Gohir.A05G153700 Gossypium hirsutum HOM05D001425 ORTHO05D001272 2.2e-15 86.3 153 36.6
Sed0026621 Sechium edule HOM05D001425 ORTHO05D001272 2.2e-15 86.3 125 40.8
COL.COLO4_31243 Corchorus olitorius HOM05D001425 ORTHO05D001272 6.5e-15 84.7 153 39.9
Prupe.4G066300 Prunus persica HOM05D001425 ORTHO05D001272 8.5e-15 84.3 156 41.0
Cc02_g15540 Coffea canephora HOM05D001425 ORTHO05D001272 3.2e-14 82.4 149 35.6
Gohir.D05G156400 Gossypium hirsutum HOM05D001425 ORTHO05D001272 3.2e-14 82.4 155 36.8
MD10G1275900 Malus domestica HOM05D001425 ORTHO05D001272 3.2e-14 82.4 156 39.7
TAR629G2569 Trochodendron aralioides HOM05D001425 ORTHO05D001272 3.2e-14 82.4 150 40.0
Atru.chr10.1575 Acer truncatum HOM05D001425 ORTHO05D001272 5.5e-14 81.6 132 40.2
QL05p049746 Quercus lobata HOM05D001425 ORTHO05D001272 5.5e-14 81.6 150 38.7
RcHm_v2.0_Chr5g0011571 Rosa chinensis HOM05D001425 ORTHO05D001272 7.2e-14 81.3 128 40.6
Gorai.011G037600 Gossypium raimondii HOM05D001425 ORTHO05D001272 9.4e-14 80.9 149 39.6
Gohir.A10G035000 Gossypium hirsutum HOM05D001425 ORTHO05D001272 1.2e-13 80.5 148 39.2
GSVIVG01021251001 Vitis vinifera HOM05D001425 ORTHO05D001272 1.2e-13 80.5 139 43.9
Dinv12758 Davidia involucrata HOM05D001425 ORTHO05D001272 1.6e-13 80.1 148 39.2
Peaxi162Scf00405g00117 Petunia axillaris HOM05D001425 ORTHO05D001272 2.1e-13 79.7 119 42.0
FAN16G2157 Fragaria x ananassa HOM05D001425 ORTHO05D001272 2.7e-13 79.3 149 34.9
Gohir.D06G138400 Gossypium hirsutum HOM05D001425 ORTHO05D001272 3.6e-13 79.0 154 35.7
FvH4_3g07370 Fragaria vesca HOM05D001425 ORTHO05D001272 4.7e-13 78.6 150 34.0
CSS0039671 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.1e-13 78.2 121 40.5
FAN25G1823 Fragaria x ananassa HOM05D001425 ORTHO05D001272 6.1e-13 78.2 121 38.8
Medtr8g085150 Medicago truncatula HOM05D001425 ORTHO05D001272 6.1e-13 78.2 154 35.7
Potri.004G060800 Populus trichocarpa HOM05D001425 ORTHO05D001272 6.1e-13 78.2 154 38.3
FAN21G1795 Fragaria x ananassa HOM05D001425 ORTHO05D001272 8.0e-13 77.8 148 35.1
Gohir.D10G035700 Gossypium hirsutum HOM05D001425 ORTHO05D001272 8.0e-13 77.8 148 38.5
Duzib235G0112 Durio zibethinus HOM05D001425 ORTHO05D001272 1.0e-12 77.4 148 35.8
Sed0000998 Sechium edule HOM05D001425 ORTHO05D001272 1.0e-12 77.4 153 37.3
arahy.Tifrunner.gnm1.ann1.A8KLXT Arachis hypogaea HOM05D001425 ORTHO05D001272 1.4e-12 77.0 150 36.7
Gorai.010G160900 Gossypium raimondii HOM05D001425 ORTHO05D001272 1.4e-12 77.0 154 35.1
Gohir.A06G132900 Gossypium hirsutum HOM05D001425 ORTHO05D001272 2.3e-12 76.3 154 35.1
Sabra04G0040100 Salix brachista HOM05D001425 ORTHO05D001272 2.3e-12 76.3 154 36.4
FAN11G3009 Fragaria x ananassa HOM05D001425 ORTHO05D001272 3.0e-12 75.9 153 34.0
Eucgr.D00475 Eucalyptus grandis HOM05D001425 ORTHO05D001272 4.0e-12 75.5 109 41.3
EL10Ac8g20563 Beta vulgaris HOM05D001425 ORTHO05D001272 5.2e-12 75.1 121 44.6
Dinv32343 Davidia involucrata HOM05D001425 ORTHO05D001272 5.2e-12 75.1 97 47.4
Ca_17900_v3 Cicer arietinum L. HOM05D001425 ORTHO05D001272 8.8e-12 74.3 129 38.8
FAN13G2418 Fragaria x ananassa HOM05D001425 ORTHO05D001272 8.8e-12 74.3 151 35.1
Actinidia35598 Actinidia chinensis HOM05D001425 ORTHO05D001272 1.5e-11 73.6 147 34.0
Lj4g0009651 Lotus japonicus HOM05D001425 ORTHO05D001272 2.0e-11 73.2 156 39.1
MD05G1295800 Malus domestica HOM05D001425 ORTHO05D001272 2.0e-11 73.2 156 35.9
Oeu041734.1 Olea europaea HOM05D001425 ORTHO05D001272 2.6e-11 72.8 131 35.9
Oeu060166.1 Olea europaea HOM05D001425 ORTHO05D001272 2.6e-11 72.8 131 35.9
Manes.17G058800 Manihot esculenta HOM05D001425 ORTHO05D001272 3.3e-11 72.4 153 35.9
VMungo0251G3022 Vigna mungo HOM05D001425 ORTHO05D001272 4.4e-11 72.0 154 35.1
Cfa000649 Carpinus fangiana HOM05D001425 ORTHO05D001272 5.7e-11 71.6 111 38.7
Lalb_Chr07g0186331 Lupinus albus HOM05D001425 ORTHO05D001272 5.7e-11 71.6 126 37.3
TAR626G1246 Trochodendron aralioides HOM05D001425 ORTHO05D001272 5.7e-11 71.6 128 37.5
Oeu039884.1 Olea europaea HOM05D001425 ORTHO05D001272 7.5e-11 71.2 96 41.7
Hund21446 Selenicereus undatus HOM05D001425 ORTHO05D001272 7.5e-11 71.2 153 36.6
arahy.Tifrunner.gnm1.ann1.T2RFJB Arachis hypogaea HOM05D001425 ORTHO05D001272 9.7e-11 70.9 154 35.7
Glyma.05G160700 Glycine max HOM05D001425 ORTHO05D001272 9.7e-11 70.9 120 38.3
MSTRG.13230 Avicennia marina HOM05D001425 ORTHO05D001272 1.7e-10 70.1 126 39.7
Glyma.08G118100 Glycine max HOM05D001425 ORTHO05D001272 2.2e-10 69.7 155 35.5
Sc05g0006910 Simmondsia chinensis HOM05D001425 ORTHO05D001272 2.2e-10 69.7 109 42.2
Sabra11G0058000 Salix brachista HOM05D001425 ORTHO05D001272 2.8e-10 69.3 115 41.7
TPR.G6742 Trifolium pratense HOM05D001425 ORTHO05D001272 2.8e-10 69.3 129 35.7
CiPaw.09G072500 Carya illinoinensis HOM05D001425 ORTHO05D001272 4.8e-10 68.6 110 39.1
Sopen03g002050 Solanum pennellii HOM05D001425 ORTHO05D001272 4.8e-10 68.6 121 42.1
Nn1g04511 Nelumbo nucifera HOM05D001425 ORTHO05D001272 6.3e-10 68.2 150 35.3
Solyc03g006040.3 Solanum lycopersicum HOM05D001425 ORTHO05D001272 6.3e-10 68.2 121 42.1
Ah.09g233510 Amaranthus hybridus HOM05D037095 ORTHO05D001272 1.4e-09 67.0 78 43.6
Nitab4.5_0005428g0040 Nicotiana tabacum HOM05D001425 ORTHO05D001272 1.4e-09 67.0 143 37.1
Phvul.002G240800 Phaseolus vulgaris HOM05D001425 ORTHO05D001272 1.4e-09 67.0 154 33.8
CAN.G866.32 Capsicum annuum HOM05D001425 ORTHO05D001272 2.4e-09 66.2 144 36.8
Potri.011G070000 Populus trichocarpa HOM05D001425 ORTHO05D001272 2.4e-09 66.2 140 38.6
Actinidia16777 Actinidia chinensis HOM05D001425 ORTHO05D001272 4.1e-09 65.5 130 36.2
SalBow7G3660 Salvia bowleyana HOM05D001425 ORTHO05D001272 4.1e-09 65.5 124 37.9
MSTRG.7426 Avicennia marina HOM05D001425 ORTHO05D001272 7.0e-09 64.7 121 38.0
PGSC0003DMG400026751 Solanum tuberosum HOM05D001425 ORTHO05D001272 1.2e-08 63.9 106 42.5
PGR042G0512 Punica granatum HOM05D001425 ORTHO05D001272 1.6e-08 63.5 150 34.0
Lalb_Chr12g0204971 Lupinus albus HOM05D001425 ORTHO05D001272 2.0e-08 63.2 155 32.3
TPR.G33016 Trifolium pratense HOM05D001425 ORTHO05D001272 2.0e-08 63.2 77 49.4
Hma1.2p1_0829F.1_g225230 Hydrangea macrophylla HOM05D001425 ORTHO05D001272 2.7e-08 62.8 62 53.2
TWI09G0354 Tripterygium wilfordii HOM05D001425 ORTHO05D001272 2.7e-08 62.8 154 35.1
Medtr8g087020 Medicago truncatula HOM05D001425 ORTHO05D001272 3.5e-08 62.4 140 33.6
MSTRG.16167 Avicennia marina HOM05D001425 ORTHO05D001272 4.5e-08 62.0 104 38.5
Psat7g069880 Pisum sativum HOM05D001425 ORTHO05D001272 4.5e-08 62.0 112 37.5
Haze_06180 Corylus avellana HOM05D001425 ORTHO05D001272 5.9e-08 61.6 71 42.3
Nitab4.5_0002458g0050 Nicotiana tabacum HOM05D001425 ORTHO05D001272 7.7e-08 61.2 98 42.9
Nn3g21110 Nelumbo nucifera HOM05D001425 ORTHO05D001272 1.7e-07 60.1 148 35.1
Psat0s2741g0080 Pisum sativum HOM05D001425 ORTHO05D001272 1.7e-07 60.1 130 32.3
Cpa.g.sc7.94 Carica papaya HOM05D001425 ORTHO05D001272 2.2e-07 59.7 141 37.6
SGA_v2.0_scaffold1G00076 Striga asiatica HOM05D001425 ORTHO05D001272 2.2e-07 59.7 104 38.5
TPR.G6770 Trifolium pratense HOM05D001425 ORTHO05D001272 3.8e-07 58.9 78 46.2
Migut.L00714 Erythranthe guttata HOM05D001425 ORTHO05D001272 6.5e-07 58.2 109 33.9
ATR0012G037 Amborella trichopoda HOM05D001425 ORTHO05D001272 8.5e-07 57.8 126 34.1
GSVIVG01020751001 Vitis vinifera HOM05D001425 ORTHO05D001272 1.5e-06 57.0 128 35.9
CDE06G2729 Ceratophyllum demersum HOM05D001425 ORTHO05D001272 4.2e-06 55.5 102 39.2
C04p68260 Brassica napus HOM05D001425 ORTHO05D001272 5.5e-06 55.1 134 32.8
BolC4t28329H Brassica oleracea HOM05D001425 ORTHO05D001272 5.5e-06 55.1 134 32.8
TAR626G0916 Trochodendron aralioides HOM05D001425 ORTHO05D001272 5.5e-06 55.1 54 55.6


User provided reference genes

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