Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p16040 Brassica napus HOM05D000355 ORTHO05D000227 4.0e-27 124.0 63 100.0
C07p16030 Brassica napus HOM05D000355 ORTHO05D000227 4.3e-13 77.4 49 83.7
C07p16080 Brassica napus HOM05D000355 ORTHO05D000227 4.8e-12 73.9 40 90.0
BcaC06g35446 Brassica carinata HOM05D000355 ORTHO05D000227 4.1e-11 70.9 40 87.5
C07p16070 Brassica napus HOM05D000355 ORTHO05D000227 4.1e-11 70.9 40 87.5
BolC7t42093H Brassica oleracea HOM05D000355 ORTHO05D000227 4.1e-11 70.9 40 87.5
BcaB03g13870 Brassica carinata HOM05D000355 ORTHO05D000227 2.6e-10 68.2 40 85.0
A07p10440 Brassica napus HOM05D000355 ORTHO05D000227 1.3e-09 65.9 40 82.5
BraA07t28844Z Brassica rapa HOM05D000355 ORTHO05D000227 1.3e-09 65.9 40 82.5
CARHR028960 Cardamine hirsuta HOM05D000355 ORTHO05D000227 3.6e-07 57.8 50 56.0
BcaB07g32554 Brassica carinata HOM05D000355 ORTHO05D000227 6.1e-07 57.0 43 65.1
A08p24990 Brassica napus HOM05D000355 ORTHO05D000227 1.4e-06 55.8 48 60.4
BraA08t34454Z Brassica rapa HOM05D000355 ORTHO05D000227 1.4e-06 55.8 48 60.4
AL1G43470 Arabidopsis lyrata HOM05D000355 ORTHO05D000227 1.8e-06 55.5 49 57.1
BcaB03g12166 Brassica carinata HOM05D000355 ORTHO05D000227 2.3e-06 55.1 42 66.7
BcaC01g00121 Brassica carinata HOM05D000355 ORTHO05D000227 3.9e-06 54.3 48 58.3
A09p36770 Brassica napus HOM05D000355 ORTHO05D000227 3.9e-06 54.3 43 62.8
C03p75990 Brassica napus HOM05D000355 ORTHO05D000227 3.9e-06 54.3 48 58.3
BolC3t19852H Brassica oleracea HOM05D000355 ORTHO05D000227 3.9e-06 54.3 48 58.3
BraA09t39193Z Brassica rapa HOM05D000355 ORTHO05D000227 3.9e-06 54.3 43 62.8
Thhalv10009054m.g Eutrema salsugineum HOM05D000355 ORTHO05D000227 5.1e-06 53.9 50 56.0
Sp1g25540 Schrenkiella parvula HOM05D000355 ORTHO05D000227 6.7e-06 53.5 49 55.1


User provided reference genes

Program Settings