Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p15790 Brassica napus HOM05D011556 ORTHO05D014123 6.8e-182 640.6 333 100.0
BolC2t06272H Brassica oleracea HOM05D011556 ORTHO05D014123 1.6e-167 592.8 333 91.6
A09p03830 Brassica napus HOM05D011556 ORTHO05D014123 8.1e-167 590.5 333 91.9
C02p10230 Brassica napus HOM05D011556 ORTHO05D014123 5.8e-165 584.3 333 92.5
BraA02t06231Z Brassica rapa HOM05D011556 ORTHO05D014123 1.1e-147 526.9 379 75.5
C08p42710 Brassica napus HOM05D011556 ORTHO05D014123 1.4e-139 500.0 335 80.9
A05p04300 Brassica napus HOM05D011556 ORTHO05D014123 1.3e-103 380.6 226 86.3
C08p49870 Brassica napus HOM05D011556 ORTHO05D041066 1.4e-99 367.1 320 67.5
BolC8t52515H Brassica oleracea HOM05D011556 ORTHO05D041066 2.5e-99 366.3 320 67.8
BolC3t14527H Brassica oleracea HOM05D011556 ORTHO05D014123 1.3e-84 317.4 274 67.9
BcaC01g05886 Brassica carinata HOM05D011556 ORTHO05D014123 2.7e-82 309.7 221 76.5
A10p23680 Brassica napus HOM05D011556 ORTHO05D014123 7.5e-80 301.6 174 89.7
BolC4t28775H Brassica oleracea HOM05D011556 ORTHO05D014123 1.4e-41 174.5 108 90.7
C02p63430 Brassica napus HOM05D014255 ORTHO05D015450 9.9e-32 141.7 152 57.2
C03p32540 Brassica napus HOM05D014255 ORTHO05D015450 9.9e-32 141.7 152 57.9
BolC2t12410H Brassica oleracea HOM05D014255 ORTHO05D015450 9.9e-32 141.7 152 57.2
BolC2t10052H Brassica oleracea HOM05D011556 ORTHO05D014123 5.6e-27 125.9 112 64.3
C04p72720 Brassica napus HOM05D009754 ORTHO05D014123 1.8e-25 120.9 152 54.6
C08p35010 Brassica napus HOM05D009754 ORTHO05D033217 3.8e-23 113.2 143 50.3
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 3.8e-23 113.2 152 46.7
C05p02990 Brassica napus HOM05D009754 ORTHO05D101014 2.1e-21 107.5 122 56.6
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 4.6e-21 106.3 134 48.5
BcaB07g33645 Brassica carinata HOM05D010893 ORTHO05D014123 1.0e-20 105.1 119 49.6
BcaC06g35412 Brassica carinata HOM05D010893 ORTHO05D016035 1.1e-19 101.7 109 52.3
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 1.1e-19 101.7 152 44.1
BcaC01g00510 Brassica carinata HOM05D010948 ORTHO05D039443 3.3e-19 100.1 220 37.7
A03p59560 Brassica napus HOM05D010948 ORTHO05D013805 3.3e-19 100.1 189 42.9
A07p28660 Brassica napus HOM05D010948 ORTHO05D013805 3.3e-19 100.1 189 42.9
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 4.3e-19 99.8 152 42.1
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 7.4e-19 99.0 148 43.9
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 9.6e-19 98.6 150 45.3
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 9.6e-19 98.6 148 43.9
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 9.6e-19 98.6 150 45.3
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 4.8e-18 96.3 150 44.7
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 8.1e-18 95.5 150 44.0
BraA06t23408Z Brassica rapa HOM05D001897 ORTHO05D001953 8.1e-18 95.5 95 50.5
C03p80810 Brassica napus HOM05D010948 ORTHO05D039443 1.1e-17 95.1 95 54.7
C07p18370 Brassica napus HOM05D009754 ORTHO05D033217 3.1e-17 93.6 93 54.8
C04p32520 Brassica napus HOM05D011556 ORTHO05D014123 5.3e-17 92.8 84 60.7
BcaC02g11825 Brassica carinata HOM05D017424 ORTHO05D094481 6.9e-17 92.4 93 51.6
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 6.9e-17 92.4 150 43.3
C03p25990 Brassica napus HOM05D010948 ORTHO05D013805 6.9e-17 92.4 126 46.8
BcaC08g47238 Brassica carinata HOM05D010893 ORTHO05D032352 2.0e-16 90.9 202 35.1
BcaB01g05924 Brassica carinata HOM05D010948 ORTHO05D013805 3.4e-16 90.1 335 31.3
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 7.6e-16 89.0 150 42.0
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 1.0e-15 88.6 150 43.3
BcaB07g31310 Brassica carinata HOM05D029219 ORTHO05D091766 1.0e-15 88.6 93 57.0
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 2.2e-15 87.4 150 41.3
BcaB03g13577 Brassica carinata HOM05D017424 ORTHO05D032352 2.9e-15 87.0 133 42.9
BcaC07g39633 Brassica carinata HOM05D017424 ORTHO05D039094 4.9e-15 86.3 150 40.7
BcaC08g46504 Brassica carinata HOM05D009754 ORTHO05D027209 9.3e-14 82.0 147 39.5
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 3.5e-13 80.1 152 41.4
BolC4t28028H Brassica oleracea HOM05D000722 ORTHO05D000025 3.5e-13 80.1 86 52.3
BolC9t55422H Brassica oleracea HOM05D010948 ORTHO05D013805 1.8e-12 77.8 272 32.4
C02p26940 Brassica napus HOM05D011556 ORTHO05D101344 2.3e-12 77.4 54 77.8
C06p45540 Brassica napus HOM05D017424 ORTHO05D032352 4.3e-11 73.2 53 64.2
C03p51770 Brassica napus HOM05D010948 ORTHO05D013805 2.1e-10 70.9 61 60.7
BcaB04g21169 Brassica carinata HOM05D014255 ORTHO05D015450 1.8e-09 67.8 68 52.9
A01p00100 Brassica napus HOM05D010948 ORTHO05D013805 1.2e-08 65.1 115 39.1
C07p10670 Brassica napus HOM05D009935 ORTHO05D012055 5.0e-07 59.7 55 56.4
BolC4t25298H Brassica oleracea HOM05D009754 ORTHO05D020043 1.1e-06 58.5 80 47.5
BcaB01g03865 Brassica carinata HOM05D003240 ORTHO05D094508 2.5e-06 57.4 143 37.8
BcaC04g20835 Brassica carinata HOM05D010948 ORTHO05D013805 3.2e-06 57.0 101 40.6
C09p38650 Brassica napus HOM05D010948 ORTHO05D013805 3.2e-06 57.0 101 40.6
BolC9t56721H Brassica oleracea HOM05D010948 ORTHO05D013805 3.2e-06 57.0 101 40.6
BolC9t53578H Brassica oleracea HOM05D011346 ORTHO05D043120 4.2e-06 56.6 88 42.0
C04p03050 Brassica napus HOM05D011346 ORTHO05D015475 5.5e-06 56.2 88 43.2
BolC4t21947H Brassica oleracea HOM05D011346 ORTHO05D015475 5.5e-06 56.2 88 43.2
BolC4t22353H Brassica oleracea HOM05D011346 ORTHO05D106028 7.2e-06 55.8 88 43.2


User provided reference genes

Program Settings