Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p15180 Brassica napus HOM05D000171 ORTHO05D000101 5.7e-67 257.3 117 100.0
BolC7t42021H Brassica oleracea HOM05D000171 ORTHO05D000101 6.1e-53 210.7 116 85.3
A07p09960 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-50 201.4 116 82.8
BraA07t28785Z Brassica rapa HOM05D000171 ORTHO05D000101 3.7e-50 201.4 116 82.8
Thhalv10029478m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.9e-28 127.1 113 57.5
C07p10820 Brassica napus HOM05D000171 ORTHO05D000101 2.6e-27 125.6 113 60.2
BolC7t41548H Brassica oleracea HOM05D000171 ORTHO05D000101 2.6e-27 125.6 113 60.2
BraA07t28501Z Brassica rapa HOM05D000171 ORTHO05D000101 9.8e-27 123.6 113 59.3
BcaC06g35792 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-25 119.0 94 67.0
BraA07t28504Z Brassica rapa HOM05D000171 ORTHO05D000101 4.1e-25 118.2 115 57.4
BcaB05g25188 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-22 109.8 113 54.9
AL1G44860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.8e-21 105.5 118 50.0
AL1G48130 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.6e-19 99.0 116 49.1
Carub.0001s3191 Capsella rubella HOM05D000171 ORTHO05D000101 3.4e-19 98.6 107 46.7
AL1G49450 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.9e-17 92.8 122 43.4
Carub.0001s3806 Capsella rubella HOM05D000171 ORTHO05D000101 3.2e-17 92.0 117 46.2
CARHR030250 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.4e-12 76.6 117 38.5
AT1G32660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.0e-12 75.1 119 41.2
Carub.0001s3186 Capsella rubella HOM05D000171 ORTHO05D000101 6.8e-12 74.3 117 39.3
Carub.0001s2866 Capsella rubella HOM05D000171 ORTHO05D000101 8.9e-12 73.9 105 38.1
Carub.0001s3352 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-11 73.2 105 39.0
Thhalv10002533m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.1e-09 67.0 102 39.2
Carub.0008s0623 Capsella rubella HOM05D000171 ORTHO05D000101 4.1e-09 65.1 118 38.1
C07p15590 Brassica napus HOM05D000171 ORTHO05D000101 9.2e-09 63.9 102 37.3
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 1.2e-08 63.5 102 37.3
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 1.2e-08 63.5 102 37.3
BcaC09g50888 Brassica carinata HOM05D000171 ORTHO05D000101 6.0e-08 61.2 111 34.2
BcaC06g35480 Brassica carinata HOM05D000171 ORTHO05D000101 7.8e-08 60.8 102 36.3
BolC7t42046H Brassica oleracea HOM05D000171 ORTHO05D000101 7.8e-08 60.8 102 36.3
BolC4t23399H Brassica oleracea HOM05D000171 ORTHO05D000101 1.0e-07 60.5 126 30.2
CARHR253630 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.3e-07 60.1 106 34.9
BcaNung00757 Brassica carinata HOM05D000171 ORTHO05D019702 1.7e-07 59.7 110 35.5
BolC4t26742H Brassica oleracea HOM05D000171 ORTHO05D000101 1.7e-07 59.7 120 36.7
Thhalv10012324m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.3e-07 59.3 105 36.2
Aa31LG6G10800 Aethionema arabicum HOM05D000171 ORTHO05D000101 3.0e-07 58.9 131 32.8
BcaC02g08701 Brassica carinata HOM05D000171 ORTHO05D000101 3.0e-07 58.9 120 35.8
Carub.0001s2863 Capsella rubella HOM05D000171 ORTHO05D000101 3.0e-07 58.9 89 34.8
Carub.0004s0100 Capsella rubella HOM05D000171 ORTHO05D000101 5.1e-07 58.2 108 36.1
Thhalv10000190m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.6e-07 57.8 120 35.8
BraA04t17325Z Brassica rapa HOM05D000171 ORTHO05D000101 8.6e-07 57.4 122 36.1
BcaC02g08657 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-06 57.0 122 35.2
BcaC02g08658 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-06 57.0 122 35.2
BcaNung05078 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-06 57.0 126 31.7
Carub.0004s0107 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-06 57.0 108 35.2
Carub.0004s0469 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-06 57.0 119 32.8
Carub.0004s1097 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-06 57.0 114 34.2
AL1G44890 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-06 56.6 113 31.9
AT1G30780 Arabidopsis thaliana HOM05D012223 ORTHO05D014321 1.5e-06 56.6 73 49.3
Carub.0004s0104 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-06 56.6 108 35.2
CARHR049440 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.9e-06 56.2 109 33.0
BcaB05g21645 Brassica carinata HOM05D000171 ORTHO05D000101 2.5e-06 55.8 81 37.0
A04p16950 Brassica napus HOM05D000171 ORTHO05D000101 3.3e-06 55.5 113 35.4
A05p25180 Brassica napus HOM05D000171 ORTHO05D000101 5.6e-06 54.7 121 33.1
Eucgr.B03076 Eucalyptus grandis HOM05D000171 ORTHO05D000101 5.6e-06 54.7 95 36.8
Thhalv10023943m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.3e-06 54.3 109 32.1
A04p24260 Brassica napus HOM05D000171 ORTHO05D000101 9.5e-06 53.9 94 38.3
BraA04t17945Z Brassica rapa HOM05D000171 ORTHO05D000101 9.5e-06 53.9 94 38.3


User provided reference genes

Program Settings