Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p14660 Brassica napus HOM05D000171 ORTHO05D020191 3.0e-105 385.2 197 100.0
BolC7t41965H Brassica oleracea HOM05D000171 ORTHO05D020191 3.6e-98 361.7 197 93.4
A07p09530 Brassica napus HOM05D000171 ORTHO05D020191 1.4e-41 173.7 99 92.9
Thhalv10009377m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.9e-20 102.4 86 64.0
Thhalv10009507m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.0e-15 85.5 106 50.9
AL9U11000 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.5e-14 83.2 70 61.4
A09p35110 Brassica napus HOM05D000171 ORTHO05D000101 7.2e-14 81.6 65 64.6
AL9U10990 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.7e-13 79.7 70 60.0
BcaC08g42944 Brassica carinata HOM05D000171 ORTHO05D000101 8.0e-13 78.2 72 59.7
C06p01870 Brassica napus HOM05D000171 ORTHO05D000101 8.0e-13 78.2 72 59.7
BolC6t35315H Brassica oleracea HOM05D000171 ORTHO05D000101 8.0e-13 78.2 72 59.7
Thhalv10009451m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.0e-12 77.8 79 57.0
Thhalv10009740m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.0e-12 77.8 81 51.9
AL1G53500 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.0e-12 76.3 69 59.4
AL5G39160 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.9e-12 75.9 71 57.7
AL3G47440 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-11 74.3 69 60.9
AL3G52270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-11 73.9 69 59.4
AL5G38280 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-11 73.9 71 57.7
BcaB07g33843 Brassica carinata HOM05D000171 ORTHO05D000101 2.0e-11 73.6 88 50.0
AL5G39170 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.6e-11 73.2 71 59.2
AL5G23680 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.3e-11 72.8 71 57.7
AT3G56890 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.3e-11 72.8 71 54.9
C01p15520 Brassica napus HOM05D000171 ORTHO05D000101 3.3e-11 72.8 91 51.6
BolC1t01504H Brassica oleracea HOM05D000171 ORTHO05D000101 3.3e-11 72.8 91 51.6
CARHR112760 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.3e-11 72.8 114 50.0
AT3G57580 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.4e-11 72.4 71 54.9
A01p12880 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-11 72.4 85 54.1
BraA01t01232Z Brassica rapa HOM05D000171 ORTHO05D000101 4.4e-11 72.4 85 54.1
Carub.0001s3326 Capsella rubella HOM05D000171 ORTHO05D000101 4.4e-11 72.4 71 56.3
Carub.0001s3614 Capsella rubella HOM05D000171 ORTHO05D000101 4.4e-11 72.4 85 51.8
CARHR213730 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.7e-11 72.0 97 48.5
AT3G57590 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 7.4e-11 71.6 71 57.7
Carub.0005s2442 Capsella rubella HOM05D000171 ORTHO05D020191 9.7e-11 71.2 71 53.5
CARHR167830 Cardamine hirsuta HOM05D000171 ORTHO05D000101 9.7e-11 71.2 71 53.5
Thhalv10006464m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 9.7e-11 71.2 70 52.9
Carub.0001s2934 Capsella rubella HOM05D000171 ORTHO05D000101 1.7e-10 70.5 70 52.9
CARHR031540 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.7e-10 70.5 83 51.8
AL5G19300 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.8e-10 69.7 70 58.6
AL1G45240 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.7e-10 69.3 85 52.9
BcaNung02780 Brassica carinata HOM05D000171 ORTHO05D000101 4.8e-10 68.9 98 48.0
C03p55070 Brassica napus HOM05D000171 ORTHO05D000101 6.3e-10 68.6 82 50.0
BolC3t17782H Brassica oleracea HOM05D000171 ORTHO05D000101 6.3e-10 68.6 82 50.0
CARHR168020 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.3e-10 68.6 71 52.1
AL1G53520 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.2e-10 68.2 81 49.4
Carub.0001s3612 Capsella rubella HOM05D000171 ORTHO05D000101 8.2e-10 68.2 80 48.8
Thhalv10012242m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.2e-10 68.2 82 48.8
Thhalv10012302m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.2e-10 68.2 68 55.9
AL5G12460 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-09 67.8 69 58.0
Thhalv10009316m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.1e-09 67.8 55 60.0
AL5G12480 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.4e-09 67.4 68 57.4
C08p06400 Brassica napus HOM05D000171 ORTHO05D000101 1.4e-09 67.4 82 48.8
BolC8t47486H Brassica oleracea HOM05D000171 ORTHO05D000101 1.4e-09 67.4 82 48.8
BcaC07g37220 Brassica carinata HOM05D000171 ORTHO05D000101 1.8e-09 67.0 82 48.8
Carub.0001s3050 Capsella rubella HOM05D000171 ORTHO05D000101 1.8e-09 67.0 94 45.7
AL5G12470 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.4e-09 66.6 68 58.8
AT2G15640 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.4e-09 66.6 69 58.0
BcaC01g03188 Brassica carinata HOM05D000171 ORTHO05D032113 2.4e-09 66.6 82 48.8
Carub.0003s2951 Capsella rubella HOM05D000171 ORTHO05D000101 2.4e-09 66.6 73 54.8
Carub.0005s2443 Capsella rubella HOM05D000171 ORTHO05D000101 2.4e-09 66.6 71 50.7
Thhalv10019504m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.4e-09 66.6 74 54.1
Carub.0003s2953 Capsella rubella HOM05D000171 ORTHO05D000101 3.1e-09 66.2 68 54.4
Thhalv10009370m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.1e-09 66.2 59 61.0
AT1G47350 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.1e-09 65.9 86 44.2
AT2G02660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.1e-09 65.9 69 53.6
CARHR148260 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.1e-09 65.9 70 52.9
Thhalv10012070m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.1e-09 65.9 82 48.8
AL5G12490 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.3e-09 65.5 69 55.1
Carub.0001s2932 Capsella rubella HOM05D000171 ORTHO05D000101 5.3e-09 65.5 67 58.2
Thhalv10009437m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.3e-09 65.5 59 55.9
C08p33960 Brassica napus HOM05D000171 ORTHO05D000101 7.0e-09 65.1 71 49.3
Carub.0003s2949 Capsella rubella HOM05D000171 ORTHO05D000101 9.1e-09 64.7 69 53.6
Carub.0005s0696 Capsella rubella HOM05D000171 ORTHO05D000101 9.1e-09 64.7 69 56.5
CARHR043190 Cardamine hirsuta HOM05D000171 ORTHO05D000101 9.1e-09 64.7 70 55.7
CARHR260050 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.2e-08 64.3 70 54.3
Thhalv10009318m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-08 64.3 59 59.3
AL1G46260 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.0e-08 63.5 84 47.6
Thhalv10009543m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.0e-08 63.5 99 46.5
Thhalv10009588m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.0e-08 63.5 96 44.8
A09p51160 Brassica napus HOM05D000171 ORTHO05D000101 2.6e-08 63.2 71 47.9
BolC8t50994H Brassica oleracea HOM05D000171 ORTHO05D000101 2.6e-08 63.2 71 47.9
BraA09t40560Z Brassica rapa HOM05D000171 ORTHO05D000101 2.6e-08 63.2 71 47.9
CARHR041580 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.6e-08 63.2 69 53.6
Thhalv10009603m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.5e-08 62.8 65 52.3
AL4G10320 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.5e-08 62.4 69 53.6
AT2G02890 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.5e-08 62.4 67 53.7
AT2G16450 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.5e-08 62.4 68 54.4
Carub.0003s3053 Capsella rubella HOM05D000171 ORTHO05D000101 4.5e-08 62.4 68 55.9
CARHR030470 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.5e-08 62.4 70 52.9
BcaB08g34488 Brassica carinata HOM05D000171 ORTHO05D000101 5.9e-08 62.0 82 45.1
Carub.0003s2948 Capsella rubella HOM05D000171 ORTHO05D000101 5.9e-08 62.0 69 50.7
AL4G35160 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.7e-08 61.6 69 47.8
AL6G43880 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.7e-08 61.6 70 51.4
AT2G16220 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 7.7e-08 61.6 69 52.2
AL1G45210 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.0e-07 61.2 63 55.6
Carub.0005s0436 Capsella rubella HOM05D000171 ORTHO05D000101 1.0e-07 61.2 68 50.0
Carub.0003s2965 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-07 60.8 72 52.8
Thhalv10009341m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.3e-07 60.8 62 53.2
Thhalv10009427m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.3e-07 60.8 59 54.2
Carub.0001s2944 Capsella rubella HOM05D000171 ORTHO05D000101 1.7e-07 60.5 69 53.6
Thhalv10009523m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.7e-07 60.5 59 57.6
BcaB08g34489 Brassica carinata HOM05D000171 ORTHO05D000101 2.2e-07 60.1 82 45.1
BcaB08g34490 Brassica carinata HOM05D000171 ORTHO05D000101 2.2e-07 60.1 82 43.9
Carub.0005s0433 Capsella rubella HOM05D000171 ORTHO05D000101 2.2e-07 60.1 64 53.1
CARHR042510 Cardamine hirsuta HOM05D000171 ORTHO05D020191 2.9e-07 59.7 56 58.9
Thhalv10009932m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.9e-07 59.7 81 44.4
AL1G45270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.8e-07 59.3 99 47.5
AL1G45620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.8e-07 59.3 69 50.7
AT1G30925 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.8e-07 59.3 60 56.7
Carub.0003s2964 Capsella rubella HOM05D000171 ORTHO05D000101 3.8e-07 59.3 69 50.7
AL1G45350 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.0e-07 58.9 78 48.7
AL1G45490 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.0e-07 58.9 71 49.3
Carub.0001s2927 Capsella rubella HOM05D000171 ORTHO05D000101 5.0e-07 58.9 73 47.9
Carub.0001s2930 Capsella rubella HOM05D000171 ORTHO05D000101 5.0e-07 58.9 68 50.0
Carub.0003s2952 Capsella rubella HOM05D000171 ORTHO05D000101 5.0e-07 58.9 69 52.2
CARHR219990 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.0e-07 58.9 79 48.1
Thhalv10009303m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.0e-07 58.9 62 53.2
Thhalv10009617m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.0e-07 58.9 59 54.2
Thhalv10009694m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.0e-07 58.9 88 39.8
Thhalv10009762m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.0e-07 58.9 59 54.2
AL1G46270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.5e-07 58.5 85 44.7
Thhalv10003077m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.5e-07 58.5 66 50.0
Thhalv10009304m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.5e-07 58.5 59 54.2
Thhalv10009630m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.5e-07 58.5 62 51.6
AL1G45280 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.5e-07 58.2 86 47.7
Carub.0001s2764 Capsella rubella HOM05D000171 ORTHO05D000101 8.5e-07 58.2 69 49.3
Thhalv10009823m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.5e-07 58.2 85 43.5
AL1G45480 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-06 57.8 70 50.0
AL1G46280 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-06 57.8 128 38.3
AL1G45470 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-06 57.4 87 47.1
AL1G45520 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-06 57.4 69 52.2
Carub.0001s2950 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-06 57.4 58 53.4
Aa31LG6G10890 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.9e-06 57.0 73 41.1
BcaC07g40211 Brassica carinata HOM05D000171 ORTHO05D000101 1.9e-06 57.0 89 39.3
A03p44440 Brassica napus HOM05D000171 ORTHO05D032113 1.9e-06 57.0 67 46.3
BraA03t13577Z Brassica rapa HOM05D000171 ORTHO05D032113 1.9e-06 57.0 67 46.3
Thhalv10009829m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.9e-06 57.0 54 55.6
AT1G30930 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.5e-06 56.6 65 53.8
Carub.0003s3052 Capsella rubella HOM05D000171 ORTHO05D000101 2.5e-06 56.6 69 50.7
AL3G52280 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.2e-06 56.2 69 52.2
AT5G52620 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.2e-06 56.2 58 48.3
Carub.0001s0357 Capsella rubella HOM05D000171 ORTHO05D000101 3.2e-06 56.2 47 57.4
AT1G33020 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.2e-06 55.8 86 40.7
BcaC08g43809 Brassica carinata HOM05D000171 ORTHO05D000101 4.2e-06 55.8 61 52.5
C06p11930 Brassica napus HOM05D000171 ORTHO05D000101 4.2e-06 55.8 61 52.5
Thhalv10012264m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.2e-06 55.8 65 53.8
C09p71120 Brassica napus HOM05D000171 ORTHO05D000101 5.5e-06 55.5 57 50.9
Thhalv10009439m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.5e-06 55.5 64 43.8
AL1G45300 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.2e-06 55.1 114 40.4
AL2G14000 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.2e-06 55.1 59 47.5
AL4G14930 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.2e-06 55.1 94 37.2
AT5G42430 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 7.2e-06 55.1 59 50.8
BcaB06g28423 Brassica carinata HOM05D000171 ORTHO05D000101 7.2e-06 55.1 60 48.3
Thhalv10015343m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.2e-06 55.1 59 50.8
Thhalv10028042m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.2e-06 55.1 60 50.0
AL1G53540 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.4e-06 54.7 81 46.9
AT1G47340 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.4e-06 54.7 81 43.2
BcaB02g09153 Brassica carinata HOM05D000171 ORTHO05D000101 9.4e-06 54.7 59 52.5


User provided reference genes

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