Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p14270 Brassica napus HOM05D007526 ORTHO05D009350 1.2e-109 399.8 203 100.0
A07p09230 Brassica napus HOM05D007526 ORTHO05D009350 1.7e-103 379.4 203 95.6
BolC7t41918H Brassica oleracea HOM05D007526 ORTHO05D009350 5.2e-100 367.9 192 97.9
BraA07t28719Z Brassica rapa HOM05D007526 ORTHO05D009350 1.2e-80 303.5 172 91.3
Sp3g20910 Schrenkiella parvula HOM05D007526 ORTHO05D009350 1.3e-66 256.9 194 71.1
Thhalv10022185m.g Eutrema salsugineum HOM05D007526 ORTHO05D009350 2.4e-65 252.7 200 68.0
BraA04t16457Z Brassica rapa HOM05D007526 ORTHO05D009350 1.3e-45 187.2 193 57.0
AL7G41840 Arabidopsis lyrata HOM05D007526 ORTHO05D009350 2.8e-45 186.0 193 57.0
CARHR099230 Cardamine hirsuta HOM05D007526 ORTHO05D009350 2.8e-45 186.0 198 57.1
Thhalv10026764m.g Eutrema salsugineum HOM05D007526 ORTHO05D009350 3.6e-45 185.7 196 57.1
CARHR220600 Cardamine hirsuta HOM05D007526 ORTHO05D009350 6.2e-45 184.9 187 56.7
C04p41350 Brassica napus HOM05D007526 ORTHO05D009350 3.4e-43 179.1 201 53.2
BcaC02g09320 Brassica carinata HOM05D007526 ORTHO05D009350 4.5e-43 178.7 201 53.2
A04p07660 Brassica napus HOM05D007526 ORTHO05D009350 4.5e-43 178.7 201 52.7
BolC4t25713H Brassica oleracea HOM05D007526 ORTHO05D009350 4.5e-43 178.7 201 53.2
BcaB02g08612 Brassica carinata HOM05D007526 ORTHO05D009350 4.9e-42 175.3 207 52.7
Sp7g12460 Schrenkiella parvula HOM05D007526 ORTHO05D009350 4.6e-40 168.7 196 53.6
Carub.0007s2786 Capsella rubella HOM05D007526 ORTHO05D009350 3.9e-39 165.6 223 51.1
THA.LOC104808623 Tarenaya hassleriana HOM05D007526 ORTHO05D009350 1.5e-35 153.7 192 52.1
AT4G14380 Arabidopsis thaliana HOM05D007526 ORTHO05D009350 5.1e-31 138.7 196 46.4
Aa31LG9G2940 Aethionema arabicum HOM05D007526 ORTHO05D009350 7.4e-30 134.8 182 48.9
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 1.8e-20 103.6 191 37.7
Gorai.006G253500 Gossypium raimondii HOM05D007526 ORTHO05D009350 3.4e-19 99.4 192 38.5
Gohir.A09G229800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 2.2e-18 96.7 192 38.0
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 2.9e-18 96.3 187 35.8
AL3G37924 Arabidopsis lyrata HOM05D007526 ORTHO05D009350 8.5e-18 94.7 97 56.7
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 1.1e-17 94.4 201 36.8
FAN17G0331 Fragaria x ananassa HOM05D007526 ORTHO05D009350 3.2e-17 92.8 200 37.0
Cpa.g.sc44.57 Carica papaya HOM05D007526 ORTHO05D009350 2.7e-16 89.7 191 36.6
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 2.7e-16 89.7 201 36.8
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 2.7e-16 89.7 200 36.5
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 6.1e-16 88.6 200 36.5
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 1.8e-15 87.0 219 33.8
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 1.8e-15 87.0 200 35.0
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 1.8e-15 87.0 203 35.0
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 5.1e-15 85.5 196 33.2
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 5.1e-15 85.5 193 32.6
TPR.G25185 Trifolium pratense HOM05D007526 ORTHO05D009350 2.5e-14 83.2 201 33.8
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 3.3e-14 82.8 200 33.5
Potri.008G167200 Populus trichocarpa HOM05D007526 ORTHO05D009350 3.3e-14 82.8 197 35.5
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 4.3e-14 82.4 196 33.2
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 4.3e-14 82.4 195 33.8
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 1.3e-13 80.9 210 32.4
Manes.15G040900 Manihot esculenta HOM05D007526 ORTHO05D009350 1.7e-13 80.5 211 33.6
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 3.7e-13 79.3 194 33.0
arahy.Tifrunner.gnm1.ann1.STCN49 Arachis hypogaea HOM05D007526 ORTHO05D009350 4.8e-13 79.0 203 33.0
Lalb_Chr19g0128211 Lupinus albus HOM05D007526 ORTHO05D009350 4.8e-13 79.0 195 36.4
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 4.8e-13 79.0 187 33.7
arahy.Tifrunner.gnm1.ann1.582VFN Arachis hypogaea HOM05D007526 ORTHO05D009350 6.3e-13 78.6 210 31.9
CsaV3_3G012050 Cucumis sativus L. HOM05D007526 ORTHO05D009350 6.3e-13 78.6 200 33.5
Phvul.007G108400 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 6.3e-13 78.6 195 34.9
Manes.03G164000 Manihot esculenta HOM05D007526 ORTHO05D009350 1.8e-12 77.0 204 30.9
MELO3C006420.2 Cucumis melo HOM05D007526 ORTHO05D009350 3.1e-12 76.3 198 31.8
Glyma.02G005400 Glycine max HOM05D007526 ORTHO05D009350 9.1e-12 74.7 198 33.8
Psat6g104840 Pisum sativum HOM05D007526 ORTHO05D009350 2.6e-11 73.2 194 33.5
Sabra08G0127400 Salix brachista HOM05D007526 ORTHO05D009350 3.4e-11 72.8 192 35.9
Sed0008521 Sechium edule HOM05D007526 ORTHO05D009350 3.4e-11 72.8 194 31.4
PGR004G2347 Punica granatum HOM05D007526 ORTHO05D009350 7.7e-11 71.6 205 30.2
MD13G1214200 Malus domestica HOM05D007526 ORTHO05D009350 2.2e-10 70.1 210 30.5
TPR.G1498 Trifolium pratense HOM05D007526 ORTHO05D009350 5.0e-10 68.9 59 55.9
COL.COLO4_15878 Corchorus olitorius HOM05D007526 ORTHO05D009350 6.5e-10 68.6 90 46.7
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 6.5e-10 68.6 198 31.3
Phvul.007G273600 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 6.5e-10 68.6 47 70.2
Glyma.10G006400 Glycine max HOM05D007526 ORTHO05D009350 8.5e-10 68.2 209 31.6
Medtr1g042820 Medicago truncatula HOM05D007526 ORTHO05D009350 1.1e-09 67.8 197 30.5
DCAR_027319 Daucus carota HOM05D007526 ORTHO05D009350 3.2e-09 66.2 195 28.2
Lj5g0022077 Lotus japonicus HOM05D007526 ORTHO05D009350 4.2e-09 65.9 207 32.9
VMungo0720G0856 Vigna mungo HOM05D007526 ORTHO05D009350 4.2e-09 65.9 228 30.3
Gohir.D09G230800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 7.2e-09 65.1 160 33.1
Medtr1g076110 Medicago truncatula HOM05D007526 ORTHO05D009350 7.2e-09 65.1 50 60.0
TWI09G0237 Tripterygium wilfordii HOM05D007526 ORTHO05D009350 7.2e-09 65.1 195 32.3
Glyma.20G209600 Glycine max HOM05D007526 ORTHO05D009350 9.4e-09 64.7 195 30.3
CiPaw.01G184600 Carya illinoinensis HOM05D007526 ORTHO05D009350 4.7e-08 62.4 195 29.7
QL06p018008 Quercus lobata HOM05D007526 ORTHO05D009350 6.1e-08 62.0 133 33.1
Glyma.10G180900 Glycine max HOM05D007526 ORTHO05D009350 1.0e-07 61.2 199 29.6
CANSAT78G2320 Cannabis sativa HOM05D007526 ORTHO05D009350 6.7e-07 58.5 216 29.6
CSS0033898 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 2.6e-06 56.6 190 28.4
Hma1.2p1_0267F.1_g107260 Hydrangea macrophylla HOM05D007526 ORTHO05D009350 4.4e-06 55.8 79 40.5
Cc03_g05540 Coffea canephora HOM05D007526 ORTHO05D009350 7.4e-06 55.1 202 26.7


User provided reference genes

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