Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p12920 Brassica napus HOM05D001224 ORTHO05D016739 4.1e-212 741.1 369 100.0
BcaC06g35617 Brassica carinata HOM05D001224 ORTHO05D016739 1.0e-170 603.6 369 85.1
C07p04250 Brassica napus HOM05D001224 ORTHO05D039145 2.8e-112 409.5 337 68.5
BcaC06g36430 Brassica carinata HOM05D001224 ORTHO05D039145 4.0e-90 335.9 258 72.5
BcaC07g37923 Brassica carinata HOM05D001224 ORTHO05D016739 8.3e-88 328.2 202 83.7
BcaC07g37922 Brassica carinata HOM05D001224 ORTHO05D016739 2.7e-70 270.0 155 87.7
BcaB08g35157 Brassica carinata HOM05D001224 ORTHO05D010571 1.5e-65 254.2 381 44.6
BcaC06g36017 Brassica carinata HOM05D001224 ORTHO05D016739 8.3e-64 248.4 191 72.3
BcaC01g02361 Brassica carinata HOM05D001224 ORTHO05D016739 8.1e-59 231.9 171 74.3
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 8.4e-48 195.3 417 36.9
BcaB08g35070 Brassica carinata HOM05D001224 ORTHO05D010571 8.7e-45 185.3 400 38.2
BcaB05g22948 Brassica carinata HOM05D001224 ORTHO05D010571 1.6e-43 181.0 343 37.9
BcaB06g26650 Brassica carinata HOM05D001224 ORTHO05D010571 1.4e-42 177.9 396 34.3
BcaB06g26317 Brassica carinata HOM05D001224 ORTHO05D010571 3.1e-42 176.8 377 36.9
C01p38730 Brassica napus HOM05D001224 ORTHO05D012331 7.6e-41 172.2 371 36.7
C07p13910 Brassica napus HOM05D001224 ORTHO05D012331 7.6e-41 172.2 373 35.7
C07p08900 Brassica napus HOM05D001224 ORTHO05D016739 5.4e-39 166.0 109 78.9
BolC7t41304H Brassica oleracea HOM05D001224 ORTHO05D016739 2.1e-38 164.1 98 83.7
BcaC06g35526 Brassica carinata HOM05D002776 ORTHO05D012331 9.6e-36 155.2 327 36.7
BcaB05g22878 Brassica carinata HOM05D001224 ORTHO05D018563 1.4e-34 151.4 443 32.1
BcaB06g27207 Brassica carinata HOM05D001224 ORTHO05D019989 2.1e-30 137.5 452 31.4
BcaC04g19844 Brassica carinata HOM05D001224 ORTHO05D012331 1.8e-29 134.4 380 32.4
BcaC06g35068 Brassica carinata HOM05D002776 ORTHO05D012331 3.0e-29 133.7 341 34.9
BcaB03g16071 Brassica carinata HOM05D001224 ORTHO05D095856 2.5e-28 130.6 198 46.5
C04p09810 Brassica napus HOM05D002702 ORTHO05D003416 9.6e-28 128.6 372 31.7
BolC4t22590H Brassica oleracea HOM05D002776 ORTHO05D016111 1.3e-27 128.3 349 31.8
BcaB02g10769 Brassica carinata HOM05D002776 ORTHO05D012331 3.7e-27 126.7 323 34.4
BcaB06g26681 Brassica carinata HOM05D001224 ORTHO05D016739 3.7e-27 126.7 126 56.3
C09p42330 Brassica napus HOM05D001224 ORTHO05D012331 6.9e-26 122.5 371 30.5
C02p39490 Brassica napus HOM05D001224 ORTHO05D012331 2.0e-25 120.9 292 33.6
BcaB06g26645 Brassica carinata HOM05D001224 ORTHO05D010571 3.4e-25 120.2 359 32.6
C05p36130 Brassica napus HOM05D001224 ORTHO05D010571 5.8e-25 119.4 324 30.2
BcaC02g11927 Brassica carinata HOM05D002702 ORTHO05D003416 2.2e-24 117.5 337 32.0
C01p48020 Brassica napus HOM05D001224 ORTHO05D010571 6.5e-24 115.9 331 32.0
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 5.5e-23 112.8 407 29.0
BcaC07g37040 Brassica carinata HOM05D001224 ORTHO05D010571 1.2e-22 111.7 365 29.6
BcaB06g26680 Brassica carinata HOM05D001224 ORTHO05D018563 2.1e-22 110.9 155 45.2
C01p45400 Brassica napus HOM05D001224 ORTHO05D010571 3.5e-22 110.2 324 31.2
C05p37780 Brassica napus HOM05D001224 ORTHO05D010571 1.3e-21 108.2 335 30.4
BcaB05g24682 Brassica carinata HOM05D001224 ORTHO05D016074 3.0e-21 107.1 323 31.0
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 3.9e-21 106.7 345 29.6
BcaB07g33904 Brassica carinata HOM05D001224 ORTHO05D003044 1.1e-20 105.1 202 38.6
BcaC01g02927 Brassica carinata HOM05D001224 ORTHO05D014478 1.9e-20 104.4 328 29.9
BolC8t47204H Brassica oleracea HOM05D001224 ORTHO05D010571 1.9e-20 104.4 346 29.2
C03p58300 Brassica napus HOM05D001224 ORTHO05D010571 5.7e-20 102.8 324 29.9
C07p01220 Brassica napus HOM05D001224 ORTHO05D010571 5.7e-20 102.8 326 30.1
BcaB03g16625 Brassica carinata HOM05D001224 ORTHO05D095114 1.6e-19 101.3 374 28.9
BcaC06g36171 Brassica carinata HOM05D001224 ORTHO05D014478 1.6e-19 101.3 335 29.0
C01p41550 Brassica napus HOM05D001224 ORTHO05D010571 2.1e-19 100.9 328 29.3
C04p05530 Brassica napus HOM05D001224 ORTHO05D010571 2.8e-19 100.5 328 29.3
BcaB05g24223 Brassica carinata HOM05D001224 ORTHO05D019989 6.2e-19 99.4 413 28.6
C05p44360 Brassica napus HOM05D001224 ORTHO05D014478 6.2e-19 99.4 318 28.3
BcaB04g17782 Brassica carinata HOM05D012943 ORTHO05D091829 8.2e-19 99.0 344 29.7
BcaB02g11186 Brassica carinata HOM05D001224 ORTHO05D092062 1.4e-18 98.2 178 39.3
BcaC02g09037 Brassica carinata HOM05D001224 ORTHO05D014478 2.4e-18 97.4 317 29.3
BolC5t30546H Brassica oleracea HOM05D001224 ORTHO05D010571 2.4e-18 97.4 328 29.0
BcaC02g11933 Brassica carinata HOM05D001224 ORTHO05D016111 5.3e-18 96.3 309 31.4
A08p08810 Brassica napus HOM05D001224 ORTHO05D010571 5.3e-18 96.3 324 29.0
BcaB07g33162 Brassica carinata HOM05D012943 ORTHO05D010571 9.0e-18 95.5 335 28.4
BcaC02g11120 Brassica carinata HOM05D001224 ORTHO05D010571 2.6e-17 94.0 311 28.9
BraA03t15283Z Brassica rapa HOM05D001224 ORTHO05D010571 2.6e-17 94.0 326 28.5
A06p28400 Brassica napus HOM05D001224 ORTHO05D012331 3.4e-17 93.6 153 45.1
BcaC05g28451 Brassica carinata HOM05D001224 ORTHO05D014478 5.8e-17 92.8 309 29.8
A10p08880 Brassica napus HOM05D001224 ORTHO05D010571 5.8e-17 92.8 327 28.4
BolC7t41307H Brassica oleracea HOM05D001224 ORTHO05D010571 2.9e-16 90.5 315 28.6
BcaB03g16206 Brassica carinata HOM05D001224 ORTHO05D010571 3.8e-16 90.1 430 29.5
BcaB04g18021 Brassica carinata HOM05D001224 ORTHO05D092713 1.9e-15 87.8 151 40.4
BcaC03g17086 Brassica carinata HOM05D001224 ORTHO05D010571 4.2e-15 86.7 351 27.1
A09p32050 Brassica napus HOM05D001224 ORTHO05D016111 2.7e-14 84.0 289 27.7
BcaB06g26684 Brassica carinata HOM05D001224 ORTHO05D010571 4.6e-14 83.2 261 32.2
BcaB06g27850 Brassica carinata HOM05D001224 ORTHO05D016074 4.6e-14 83.2 189 37.6
BcaC08g44195 Brassica carinata HOM05D001224 ORTHO05D014478 4.6e-14 83.2 350 27.4
C05p36970 Brassica napus HOM05D001224 ORTHO05D024276 6.1e-14 82.8 160 40.0
C07p11380 Brassica napus HOM05D001379 ORTHO05D012331 7.9e-14 82.4 237 28.7
BolC5t32442H Brassica oleracea HOM05D001224 ORTHO05D024276 1.0e-13 82.0 143 41.3
BcaB04g16977 Brassica carinata HOM05D001224 ORTHO05D010571 2.3e-13 80.9 289 28.7
BcaB05g23791 Brassica carinata HOM05D001224 ORTHO05D010571 2.3e-13 80.9 127 40.2
C02p15640 Brassica napus HOM05D001224 ORTHO05D010571 2.3e-13 80.9 131 38.9
BolC9t57112H Brassica oleracea HOM05D001224 ORTHO05D012331 3.9e-13 80.1 227 34.4
BcaB04g17485 Brassica carinata HOM05D001224 ORTHO05D019989 5.1e-13 79.7 354 27.4
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 6.7e-13 79.3 289 28.4
C03p71030 Brassica napus HOM05D001224 ORTHO05D016111 6.7e-13 79.3 361 28.5
BolC3t19387H Brassica oleracea HOM05D001224 ORTHO05D016111 8.7e-13 79.0 335 28.1
BcaC05g27135 Brassica carinata HOM05D001224 ORTHO05D010571 1.1e-12 78.6 131 38.2
A01p25420 Brassica napus HOM05D001224 ORTHO05D014478 1.1e-12 78.6 261 28.7
C05p30230 Brassica napus HOM05D001224 ORTHO05D010571 1.1e-12 78.6 131 38.2
BcaB01g02585 Brassica carinata HOM05D001224 ORTHO05D000395 4.3e-12 76.6 154 40.9
BolC5t33158H Brassica oleracea HOM05D001224 ORTHO05D010571 4.3e-12 76.6 197 30.5
BcaB03g16627 Brassica carinata HOM05D001224 ORTHO05D018563 7.4e-12 75.9 316 28.5
C03p64930 Brassica napus HOM05D002776 ORTHO05D000395 9.7e-12 75.5 101 41.6
C06p04810 Brassica napus HOM05D001224 ORTHO05D010571 1.3e-11 75.1 127 37.8
BcaB04g16976 Brassica carinata HOM05D001224 ORTHO05D016074 1.6e-11 74.7 76 57.9
BcaB06g25741 Brassica carinata HOM05D001224 ORTHO05D016074 2.2e-11 74.3 118 43.2
BcaB02g11183 Brassica carinata HOM05D001224 ORTHO05D016074 3.7e-11 73.6 304 27.3
BcaB05g22950 Brassica carinata HOM05D001224 ORTHO05D018563 6.3e-11 72.8 89 51.7
BcaC05g26849 Brassica carinata HOM05D001224 ORTHO05D014478 8.2e-11 72.4 131 36.6
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 1.1e-10 72.0 402 25.1
BcaB08g35078 Brassica carinata HOM05D001224 ORTHO05D016074 1.4e-10 71.6 111 44.1
BolC9t57418H Brassica oleracea HOM05D001224 ORTHO05D003044 1.4e-10 71.6 163 33.1
BcaB04g18242 Brassica carinata HOM05D001224 ORTHO05D010571 1.8e-10 71.2 388 27.1
C03p68610 Brassica napus HOM05D000675 ORTHO05D000395 4.1e-10 70.1 74 50.0
BolC3t19120H Brassica oleracea HOM05D000675 ORTHO05D000395 4.1e-10 70.1 74 50.0
BcaB01g01037 Brassica carinata HOM05D001224 ORTHO05D010571 5.3e-10 69.7 357 27.2
BcaC05g27783 Brassica carinata HOM05D001224 ORTHO05D000395 5.3e-10 69.7 370 26.5
C07p08920 Brassica napus HOM05D001224 ORTHO05D010571 9.0e-10 68.9 321 26.2
C09p45500 Brassica napus HOM05D001498 ORTHO05D016111 9.0e-10 68.9 160 33.8
BcaC02g11069 Brassica carinata HOM05D002776 ORTHO05D012331 1.2e-09 68.6 107 45.8
BraA06t25784Z Brassica rapa HOM05D001224 ORTHO05D012331 1.5e-09 68.2 106 46.2
BcaB01g01183 Brassica carinata HOM05D001224 ORTHO05D019989 2.0e-09 67.8 161 34.8
BcaC09g48604 Brassica carinata HOM05D001224 ORTHO05D018692 2.6e-09 67.4 392 26.8
BcaB01g02584 Brassica carinata HOM05D001224 ORTHO05D019989 5.9e-09 66.2 157 33.8
BcaC05g27713 Brassica carinata HOM05D001224 ORTHO05D024276 1.7e-08 64.7 138 37.7
BcaB07g33938 Brassica carinata HOM05D001224 ORTHO05D019989 2.2e-08 64.3 175 32.6
BcaB04g17609 Brassica carinata HOM05D001224 ORTHO05D019989 6.5e-08 62.8 243 29.2
BcaB04g17592 Brassica carinata HOM05D001224 ORTHO05D016074 1.1e-07 62.0 64 57.8
BcaC04g20542 Brassica carinata HOM05D002776 ORTHO05D012331 1.4e-07 61.6 106 42.5
BcaB04g17772 Brassica carinata HOM05D001224 ORTHO05D010571 1.9e-07 61.2 81 46.9
BcaB04g17704 Brassica carinata HOM05D001224 ORTHO05D096088 5.5e-07 59.7 180 32.2
C03p69230 Brassica napus HOM05D001224 ORTHO05D042758 7.2e-07 59.3 47 70.2
BolC3t19180H Brassica oleracea HOM05D001224 ORTHO05D042758 7.2e-07 59.3 47 70.2
BolC4t23819H Brassica oleracea HOM05D002776 ORTHO05D000395 3.6e-06 57.0 95 36.8
BolC5t31762H Brassica oleracea HOM05D001224 ORTHO05D010571 7.9e-06 55.8 81 43.2


User provided reference genes

Program Settings