Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p12190 Brassica napus HOM05D005627 ORTHO05D013519 1.1e-92 343.2 167 100.0
BolC7t41687H Brassica oleracea HOM05D005627 ORTHO05D013519 7.5e-89 330.5 165 97.0
BolC7t41683H Brassica oleracea HOM05D005627 ORTHO05D013519 1.1e-87 326.6 165 95.8
BolC6t38917H Brassica oleracea HOM05D005627 ORTHO05D013519 1.2e-83 313.2 164 91.5
C07p12160 Brassica napus HOM05D005627 ORTHO05D013519 4.0e-82 308.1 195 81.0
C06p20900 Brassica napus HOM05D005627 ORTHO05D013519 1.4e-79 299.7 165 87.9
BolC9t55516H Brassica oleracea HOM05D005627 ORTHO05D013519 2.7e-78 295.4 166 88.6
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 5.2e-74 281.2 193 73.1
BcaB04g18138 Brassica carinata HOM05D005627 ORTHO05D013519 1.8e-53 213.0 181 58.0
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 7.4e-52 207.6 194 52.6
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 5.3e-50 201.4 194 50.5
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 5.3e-50 201.4 194 51.5
BcaB01g01859 Brassica carinata HOM05D005627 ORTHO05D013519 1.0e-48 197.2 193 50.8
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 3.5e-46 188.7 169 55.0
BraA01t02229Z Brassica rapa HOM05D005627 ORTHO05D013519 3.5e-46 188.7 169 55.0
BraA02t07754Z Brassica rapa HOM05D005627 ORTHO05D013519 7.4e-44 181.0 166 54.2
BcaC04g21890 Brassica carinata HOM05D005627 ORTHO05D018690 3.2e-39 165.6 126 71.4
BraA06t25407Z Brassica rapa HOM05D005627 ORTHO05D018690 6.1e-38 161.4 122 73.0
BolC2t11142H Brassica oleracea HOM05D005627 ORTHO05D018690 8.8e-37 157.5 122 72.1
C09p26130 Brassica napus HOM05D005627 ORTHO05D018690 7.4e-36 154.5 122 70.5
C07p18300 Brassica napus HOM05D005627 ORTHO05D018690 1.5e-33 146.7 122 67.2
BcaC06g35245 Brassica carinata HOM05D005627 ORTHO05D018690 3.4e-33 145.6 80 91.2
BolC6t37278H Brassica oleracea HOM05D005627 ORTHO05D040269 4.5e-33 145.2 94 81.9
C06p06910 Brassica napus HOM05D005627 ORTHO05D013519 5.9e-33 144.8 85 74.1
BolC7t42340H Brassica oleracea HOM05D005627 ORTHO05D018690 5.9e-33 144.8 82 89.0
C08p05920 Brassica napus HOM05D005627 ORTHO05D018690 1.1e-31 140.6 133 63.9
BraA06t25317Z Brassica rapa HOM05D005627 ORTHO05D013519 2.5e-31 139.4 122 63.9
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 2.5e-31 139.4 160 47.5
C06p38190 Brassica napus HOM05D005627 ORTHO05D040269 1.6e-30 136.7 96 79.2
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 5.1e-29 131.7 193 38.9
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 1.1e-28 130.6 181 39.2
BraA06t25653Z Brassica rapa HOM05D005627 ORTHO05D013519 2.6e-28 129.4 145 47.6
C02p24050 Brassica napus HOM05D001038 ORTHO05D000395 6.3e-27 124.8 163 43.6
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 6.5e-24 114.8 199 31.7
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 8.5e-24 114.4 189 34.4
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 1.1e-23 114.0 179 36.3
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 9.4e-23 110.9 179 34.6
BraA09t36746Z Brassica rapa HOM05D005627 ORTHO05D013519 1.2e-22 110.5 70 68.6
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 1.6e-22 110.2 189 33.3
BolC7t41411H Brassica oleracea HOM05D005627 ORTHO05D041386 2.6e-20 102.8 91 63.7
C07p09730 Brassica napus HOM05D005627 ORTHO05D041386 9.7e-20 100.9 91 62.6
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 1.3e-19 100.5 190 33.7
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 6.3e-19 98.2 174 33.9
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 1.4e-18 97.1 186 28.0
BolC8t47414H Brassica oleracea HOM05D005627 ORTHO05D013519 5.3e-18 95.1 90 58.9
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 5.3e-18 95.1 179 34.6
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 2.6e-17 92.8 81 54.3
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 4.5e-17 92.0 197 30.5
C01p21260 Brassica napus HOM05D001038 ORTHO05D000395 7.7e-17 91.3 127 40.2
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 1.0e-16 90.9 130 35.4
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 2.2e-16 89.7 186 29.6
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 5.0e-16 88.6 186 25.8
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 5.0e-16 88.6 85 43.5
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 1.1e-15 87.4 175 30.3
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 1.9e-15 86.7 167 31.1
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 2.5e-15 86.3 191 27.7
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 3.2e-15 85.9 189 27.5
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 3.2e-15 85.9 176 29.5
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 3.2e-15 85.9 197 29.4
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 3.2e-15 85.9 167 31.1
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 3.2e-15 85.9 176 30.7
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 4.2e-15 85.5 187 27.8
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 4.2e-15 85.5 187 27.8
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 5.5e-15 85.1 186 29.0
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 9.4e-15 84.3 188 25.5
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 9.4e-15 84.3 194 28.9
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 9.4e-15 84.3 188 25.5
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 9.4e-15 84.3 190 28.9
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 9.4e-15 84.3 188 25.5
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 1.6e-14 83.6 186 26.3
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 1.6e-14 83.6 182 27.5
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 1.6e-14 83.6 186 26.3
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 2.1e-14 83.2 191 27.7
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 2.1e-14 83.2 179 27.9
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 2.1e-14 83.2 182 27.5
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 2.7e-14 82.8 199 28.1
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 2.7e-14 82.8 189 27.0
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 2.7e-14 82.8 199 28.1
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 3.6e-14 82.4 176 27.8
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 3.6e-14 82.4 180 27.8
BcaB01g01348 Brassica carinata HOM05D008838 ORTHO05D021876 4.7e-14 82.0 103 35.0
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 4.7e-14 82.0 176 28.4
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 6.1e-14 81.6 190 28.4
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 8.0e-14 81.3 188 27.1
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 8.0e-14 81.3 159 28.9
A10p07430 Brassica napus HOM05D001038 ORTHO05D042212 1.0e-13 80.9 56 58.9
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 1.0e-13 80.9 190 28.9
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 1.4e-13 80.5 199 27.6
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 1.4e-13 80.5 199 27.6
A03p31870 Brassica napus HOM05D005627 ORTHO05D027884 1.8e-13 80.1 136 28.7
A09p28360 Brassica napus HOM05D006289 ORTHO05D027118 1.8e-13 80.1 181 24.9
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 3.0e-13 79.3 167 30.5
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 3.0e-13 79.3 187 25.7
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 3.0e-13 79.3 199 27.6
BraA06t24543Z Brassica rapa HOM05D005627 ORTHO05D027884 3.0e-13 79.3 136 27.9
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 4.0e-13 79.0 190 26.8
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 5.2e-13 78.6 195 24.6
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 6.7e-13 78.2 199 29.1
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 8.8e-13 77.8 180 26.7
BcaC04g20562 Brassica carinata HOM05D006289 ORTHO05D016037 2.6e-12 76.3 135 31.9
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 3.3e-12 75.9 191 26.2
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 3.3e-12 75.9 149 32.9
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 4.4e-12 75.5 130 30.0
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 5.7e-12 75.1 185 25.9
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 9.7e-12 74.3 186 28.0
BolC7t41649H Brassica oleracea HOM05D005627 ORTHO05D027884 1.7e-11 73.6 131 29.8
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 2.2e-11 73.2 176 23.9
BcaC08g46851 Brassica carinata HOM05D009418 ORTHO05D090315 2.8e-11 72.8 187 23.5
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 2.8e-11 72.8 186 23.1
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 2.8e-11 72.8 160 28.1
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 4.8e-11 72.0 169 28.4
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 6.3e-11 71.6 174 27.0
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 6.3e-11 71.6 192 26.6
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 8.2e-11 71.2 186 22.0
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 8.2e-11 71.2 176 27.8
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 8.2e-11 71.2 184 28.8
BraA04t18509Z Brassica rapa HOM05D005627 ORTHO05D021837 8.2e-11 71.2 131 30.5
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 8.2e-11 71.2 185 28.6
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-10 70.9 191 27.2
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 1.4e-10 70.5 183 26.2
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 1.8e-10 70.1 190 26.8
A10p08780 Brassica napus HOM05D009418 ORTHO05D018626 1.8e-10 70.1 166 28.9
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 1.8e-10 70.1 190 26.8
BraSC37t46125Z Brassica rapa HOM05D009418 ORTHO05D018626 1.8e-10 70.1 166 28.9
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 2.4e-10 69.7 180 25.0
Sp4g09860 Schrenkiella parvula HOM05D005627 ORTHO05D011792 2.4e-10 69.7 124 33.9
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 3.1e-10 69.3 171 26.9
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 3.1e-10 69.3 176 28.4
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 4.1e-10 68.9 173 27.7
BolC4t27750H Brassica oleracea HOM05D009418 ORTHO05D018626 4.1e-10 68.9 169 29.6
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 4.1e-10 68.9 173 27.7
BraA04t18196Z Brassica rapa HOM05D005627 ORTHO05D027884 4.1e-10 68.9 125 28.0
C08p22740 Brassica napus HOM05D009418 ORTHO05D018626 7.0e-10 68.2 163 28.8
BolC8t49910H Brassica oleracea HOM05D009418 ORTHO05D018626 7.0e-10 68.2 163 28.8
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 9.1e-10 67.8 191 25.7
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 1.2e-09 67.4 190 27.4
BcaC08g44170 Brassica carinata HOM05D009418 ORTHO05D017574 1.6e-09 67.0 176 27.8
A06p22330 Brassica napus HOM05D005627 ORTHO05D011976 2.0e-09 66.6 189 24.9
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 5.9e-09 65.1 192 26.0
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 5.9e-09 65.1 191 26.2
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 5.9e-09 65.1 191 26.2
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 5.9e-09 65.1 189 25.9
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 7.7e-09 64.7 80 37.5
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 1.0e-08 64.3 174 25.9
BolC5t33636H Brassica oleracea HOM05D008838 ORTHO05D021837 1.3e-08 63.9 72 37.5
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 1.7e-08 63.5 186 20.4
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 1.7e-08 63.5 146 25.3
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 2.2e-08 63.2 175 26.9
A05p13630 Brassica napus HOM05D006289 ORTHO05D027692 2.2e-08 63.2 161 29.8
A06p26790 Brassica napus HOM05D005627 ORTHO05D021837 2.2e-08 63.2 68 41.2
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 2.2e-08 63.2 174 25.9
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 2.2e-08 63.2 175 26.9
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 2.2e-08 63.2 175 26.9
BcaB01g01600 Brassica carinata HOM05D009418 ORTHO05D092871 2.9e-08 62.8 155 30.3
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 3.8e-08 62.4 121 27.3
BraA01t02617Z Brassica rapa HOM05D005627 ORTHO05D017564 3.8e-08 62.4 109 28.4
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 3.8e-08 62.4 121 27.3
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 3.8e-08 62.4 172 25.6
BcaNung05731 Brassica carinata HOM05D005627 ORTHO05D011976 6.5e-08 61.6 119 31.9
BolC5t32399H Brassica oleracea HOM05D008838 ORTHO05D021837 8.5e-08 61.2 72 36.1
BcaB02g10994 Brassica carinata HOM05D005627 ORTHO05D011976 1.1e-07 60.8 115 33.0
C02p45490 Brassica napus HOM05D006289 ORTHO05D039115 1.1e-07 60.8 195 22.1
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 1.5e-07 60.5 140 25.0
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 1.5e-07 60.5 80 40.0
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 1.5e-07 60.5 140 25.0
A03p68400 Brassica napus HOM05D005627 ORTHO05D017564 2.5e-07 59.7 106 28.3
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 2.5e-07 59.7 186 24.2
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 4.2e-07 58.9 182 21.4
BraA08t34214Z Brassica rapa HOM05D008838 ORTHO05D021837 4.2e-07 58.9 67 35.8
BcaC06g35917 Brassica carinata HOM05D005627 ORTHO05D011976 5.5e-07 58.5 126 31.0
BraA05t20302Z Brassica rapa HOM05D006289 ORTHO05D027692 5.5e-07 58.5 160 29.4
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 9.4e-07 57.8 135 24.4
C02p52100 Brassica napus HOM05D007462 ORTHO05D002086 9.4e-07 57.8 79 39.2
BcaC03g17142 Brassica carinata HOM05D005627 ORTHO05D011976 1.2e-06 57.4 136 27.9
BolC2t11140H Brassica oleracea HOM05D005627 ORTHO05D011976 1.2e-06 57.4 136 27.9
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 1.6e-06 57.0 74 29.7
BolC5t30494H Brassica oleracea HOM05D006289 ORTHO05D009842 2.1e-06 56.6 77 37.7
BolC8t47418H Brassica oleracea HOM05D005627 ORTHO05D042654 2.7e-06 56.2 140 24.3
BolC9t56622H Brassica oleracea HOM05D013280 ORTHO05D011792 2.7e-06 56.2 149 27.5
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 3.6e-06 55.8 133 24.1
BcaC07g37194 Brassica carinata HOM05D005627 ORTHO05D011976 4.7e-06 55.5 130 26.9
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 4.7e-06 55.5 153 24.2
C01p10680 Brassica napus HOM05D005627 ORTHO05D011792 4.7e-06 55.5 60 33.3
BNapus_Darmor_BZH_scaffold_103p00100 Brassica napus HOM05D005627 ORTHO05D017564 6.1e-06 55.1 106 28.3
BNapus_Darmor_BZH_scaffold_104p00110 Brassica napus HOM05D005627 ORTHO05D017564 6.1e-06 55.1 106 28.3
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 6.1e-06 55.1 74 32.4
BraSC36t46108Z Brassica rapa HOM05D005627 ORTHO05D017564 6.1e-06 55.1 106 28.3
C01p43410 Brassica napus HOM05D006289 ORTHO05D017568 8.0e-06 54.7 175 22.9


User provided reference genes

Program Settings